Ggra9497.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra9497.t1 vs. uniprot
Match: A0A2V3J6V1 (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6V1_9FLOR) HSP 1 Score: 140 bits (352), Expect = 2.150e-40 Identity = 66/84 (78.57%), Postives = 76/84 (90.48%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLVDAIRTSSDGATFWNIPSVLIRGNTIKYIRVPELVLSILDDERA 84
MLPLSLLKSATGCPILIELKNGETYNAKL +MDLWMN++L DA+RTS DG FW++P + IRGNTIKYIRVPELVL I+++ERA
Sbjct: 1 MLPLSLLKSATGCPILIELKNGETYNAKLHSMDLWMNMSLTDAVRTSRDGNDFWHVPQLYIRGNTIKYIRVPELVLGIVEEERA 84
BLAST of Ggra9497.t1 vs. uniprot
Match: R7QMG7 (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMG7_CHOCR) HSP 1 Score: 115 bits (287), Expect = 1.790e-30 Identity = 54/83 (65.06%), Postives = 66/83 (79.52%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLVDAIRTSSDGATFWNIPSVLIRGNTIKYIRVPELVLSILDDER 83
MLPLSLLKS+TG PIL+ELKNG+TYN L N+D WMN+ L D IRTS DG FW++P + IRGNTIKY+RVP+ VL + DE+
Sbjct: 1 MLPLSLLKSSTGYPILVELKNGDTYNGHLSNIDQWMNVNLNDVIRTSKDGDHFWSVPEMYIRGNTIKYLRVPDAVLDAVADEK 83
BLAST of Ggra9497.t1 vs. uniprot
Match: R7QHR4 (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHR4_CHOCR) HSP 1 Score: 115 bits (287), Expect = 8.400e-30 Identity = 54/83 (65.06%), Postives = 66/83 (79.52%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLVDAIRTSSDGATFWNIPSVLIRGNTIKYIRVPELVLSILDDER 83
MLPLSLLKS+TG PIL+ELKNG+TYN L N+D WMN+ L D IRTS DG FW++P + IRGNTIKY+RVP+ VL + DE+
Sbjct: 77 MLPLSLLKSSTGYPILVELKNGDTYNGHLSNIDQWMNVNLNDVIRTSKDGDHFWSVPEMYIRGNTIKYLRVPDAVLDAVADEK 159
BLAST of Ggra9497.t1 vs. uniprot
Match: A0A1X6P2E3 (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2E3_PORUM) HSP 1 Score: 110 bits (274), Expect = 1.210e-27 Identity = 48/84 (57.14%), Postives = 69/84 (82.14%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLVDAIRTSSDGATFWNIPSVLIRGNTIKYIRVPELVLSILDDERA 84
MLPL+LL+S+TG P+L+ELKNG+TY+ L ++D WMNL L DA+RTS++G +FW++P V IRGNT+KY+R PE ++ I+ +E A
Sbjct: 1 MLPLTLLRSSTGHPVLVELKNGDTYSGVLVSIDSWMNLNLADAVRTSAEGDSFWSVPKVYIRGNTVKYVRAPEEIVDIVAEEAA 84
BLAST of Ggra9497.t1 vs. uniprot
Match: W7TE23 (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TE23_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.510e-26 Identity = 49/82 (59.76%), Postives = 64/82 (78.05%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLVDAIRTSSDGATFWNIPSVLIRGNTIKYIRVPELVLSILDDE 82
MLPLSLLK+A G P+L+ELKNG+TYN +L + D WMN+TL D I TS DG FW IP +RGN+IKY+RVPE V+ ++++E
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGDTYNGRLVSCDTWMNITLRDVICTSRDGDRFWKIPECYVRGNSIKYLRVPEEVIDMVNEE 82
BLAST of Ggra9497.t1 vs. uniprot
Match: sm-like protein LSM4 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB93CDA (sm-like protein LSM4 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB93CDA) HSP 1 Score: 103 bits (258), Expect = 6.020e-26 Identity = 50/84 (59.52%), Postives = 62/84 (73.81%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLVDAIRTSSDGATFWNIPSVLIRGNTIKYIRVPELVLSILDDERA 84
MLPLSLLK+A G P+L+ELKNGETYN L N D WMN+ L + I TS DG FW +P IRGNTIKY+RVP+ V+ + DE++
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQDEKS 84
BLAST of Ggra9497.t1 vs. uniprot
Match: A0A024GT20 (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GT20_9STRA) HSP 1 Score: 103 bits (257), Expect = 7.840e-26 Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLVDAIRTSSDGATFWNIPSVLIRGNTIKYIRVPELVLSILDDE 82
MLPLSLL++A G P+L+ELKNG+TYN +N D WMN+ L D I TS DG FW +P IRGNT+KY+RVP +L ++ +E
Sbjct: 1 MLPLSLLRAAQGHPMLVELKNGDTYNGHFKNCDTWMNINLCDVICTSKDGDRFWKMPECYIRGNTVKYVRVPNEILGLVQEE 82
BLAST of Ggra9497.t1 vs. uniprot
Match: A0A7S3VUA5 (U6 snRNA-associated Sm-like protein LSm4 (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3VUA5_9SPIT) HSP 1 Score: 102 bits (255), Expect = 8.710e-26 Identity = 47/82 (57.32%), Postives = 63/82 (76.83%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLVDAIRTSSDGATFWNIPSVLIRGNTIKYIRVPELVLSILDDE 82
MLPLSLL++ATG P+L+ELKNGET+N L D WMN++L + I TS DG FW +P V+IRGN IKY+R+PE V+ ++ +E
Sbjct: 13 MLPLSLLRTATGNPMLVELKNGETFNGTLVGCDTWMNISLKEVICTSRDGDRFWRLPEVIIRGNNIKYLRIPEEVIDMVPEE 94
BLAST of Ggra9497.t1 vs. uniprot
Match: A0A6A3LNI3 (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3LNI3_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.380e-25 Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLVDAIRTSSDGATFWNIPSVLIRGNTIKYIRVPELVLSILDDE 82
MLPLSLLK+A G P+L+ELKNG+TYN L N D WMN+ L + I TS DG FW +P IRGNTIKYIRVP +L ++++E
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRFWKMPECYIRGNTIKYIRVPNEILDMVNEE 82
BLAST of Ggra9497.t1 vs. uniprot
Match: A0A2T8IN23 (U6 snRNA-associated Sm-like protein LSm4 n=4 Tax=Mesangiospermae TaxID=1437183 RepID=A0A2T8IN23_9POAL) HSP 1 Score: 101 bits (251), Expect = 1.730e-25 Identity = 49/84 (58.33%), Postives = 61/84 (72.62%), Query Frame = 0
Query: 1 MLPLSLLKSATGCPILIELKNGETYNAKLRNMDLWMNLTLVDAIRTSSDGATFWNIPSVLIRGNTIKYIRVPELVLSILDDERA 84
MLPLSLLK+A G P+L+ELKNGETYN L N D WMN+ L + I TS DG FW +P IRGNTIKY+RVP+ V+ + +E +
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECYIRGNTIKYLRVPDEVIDKVQEETS 84 The following BLAST results are available for this feature:
BLAST of Ggra9497.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra9497.t1 ID=Ggra9497.t1|Name=Ggra9497.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=133bpback to top |