Ggra1007.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1007.t1
Unique NameGgra1007.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length151
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:197387..197839 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1007Ggra1007Gracilaria gracilis GNS1m malegenetig00000027_pilon 197387..197839 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1007.t1.start1Ggra1007.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000027_pilon 197387..197389 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1007.t1.CDS1Ggra1007.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000027_pilon 197387..197839 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1007.t1.exon1Ggra1007.t1.exon1Gracilaria gracilis GNS1m maleexontig00000027_pilon 197387..197839 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1007.t1.stop1Ggra1007.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000027_pilon 197837..197839 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1007.t1Ggra1007.t1Gracilaria gracilis GNS1m malepolypeptidetig00000027_pilon 197387..197839 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1007.t1 ID=Ggra1007.t1|Name=Ggra1007.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=151bp
MSAEEVLDAVTDDDTDRSDLPSARPNTLIDIEPKEVTADSIEHEEREMSE
GDDVDVAEERMEAAISDFEFMVSLLFFGESWSPVTIYNSVRSLFPLFFRS
LAFGLESSVLSRRSHPRMAVIQPVRRVLDDMATADTLHHEAATEWRATHL
*
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spliced messenger RNA

>Ggra1007.t1 ID=Ggra1007.t1|Name=Ggra1007.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=453bp|location=Sequence derived from alignment at tig00000027_pilon:197387..197839+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCAGCTGAAGAAGTTCTTGATGCTGTGACCGATGACGACACTGACCG
CTCTGACCTTCCTTCCGCGCGCCCGAACACTCTCATCGACATCGAACCAA
AAGAAGTAACGGCCGATTCTATTGAACATGAAGAACGAGAAATGTCAGAA
GGAGACGATGTAGATGTAGCGGAGGAGCGCATGGAGGCAGCGATTTCCGA
CTTTGAATTCATGGTTTCTTTGCTCTTTTTCGGAGAGTCTTGGTCCCCAG
TGACGATATACAACAGTGTTCGCTCTCTTTTTCCACTTTTCTTTCGTAGT
CTGGCCTTTGGCCTTGAATCATCCGTGCTGTCGCGGCGCTCACACCCCCG
CATGGCTGTAATTCAACCTGTCCGTCGGGTTCTCGACGACATGGCTACTG
CGGACACGCTTCATCATGAGGCCGCGACGGAGTGGCGAGCCACACATCTT
TAG
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protein sequence of Ggra1007.t1

>Ggra1007.t1 ID=Ggra1007.t1|Name=Ggra1007.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=151bp
MSAEEVLDAVTDDDTDRSDLPSARPNTLIDIEPKEVTADSIEHEEREMSE
GDDVDVAEERMEAAISDFEFMVSLLFFGESWSPVTIYNSVRSLFPLFFRS
LAFGLESSVLSRRSHPRMAVIQPVRRVLDDMATADTLHHEAATEWRATHL
*
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mRNA from alignment at tig00000027_pilon:197387..197839+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1007.t1 ID=Ggra1007.t1|Name=Ggra1007.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=453bp|location=Sequence derived from alignment at tig00000027_pilon:197387..197839+ (Gracilaria gracilis GNS1m male)
ATGTCAGCTGAAGAAGTTCTTGATGCTGTGACCGATGACGACACTGACCG
CTCTGACCTTCCTTCCGCGCGCCCGAACACTCTCATCGACATCGAACCAA
AAGAAGTAACGGCCGATTCTATTGAACATGAAGAACGAGAAATGTCAGAA
GGAGACGATGTAGATGTAGCGGAGGAGCGCATGGAGGCAGCGATTTCCGA
CTTTGAATTCATGGTTTCTTTGCTCTTTTTCGGAGAGTCTTGGTCCCCAG
TGACGATATACAACAGTGTTCGCTCTCTTTTTCCACTTTTCTTTCGTAGT
CTGGCCTTTGGCCTTGAATCATCCGTGCTGTCGCGGCGCTCACACCCCCG
CATGGCTGTAATTCAACCTGTCCGTCGGGTTCTCGACGACATGGCTACTG
CGGACACGCTTCATCATGAGGCCGCGACGGAGTGGCGAGCCACACATCTT
TAG
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Coding sequence (CDS) from alignment at tig00000027_pilon:197387..197839+

>Ggra1007.t1 ID=Ggra1007.t1|Name=Ggra1007.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=453bp|location=Sequence derived from alignment at tig00000027_pilon:197387..197839+ (Gracilaria gracilis GNS1m male)
ATGTCAGCTGAAGAAGTTCTTGATGCTGTGACCGATGACGACACTGACCG
CTCTGACCTTCCTTCCGCGCGCCCGAACACTCTCATCGACATCGAACCAA
AAGAAGTAACGGCCGATTCTATTGAACATGAAGAACGAGAAATGTCAGAA
GGAGACGATGTAGATGTAGCGGAGGAGCGCATGGAGGCAGCGATTTCCGA
CTTTGAATTCATGGTTTCTTTGCTCTTTTTCGGAGAGTCTTGGTCCCCAG
TGACGATATACAACAGTGTTCGCTCTCTTTTTCCACTTTTCTTTCGTAGT
CTGGCCTTTGGCCTTGAATCATCCGTGCTGTCGCGGCGCTCACACCCCCG
CATGGCTGTAATTCAACCTGTCCGTCGGGTTCTCGACGACATGGCTACTG
CGGACACGCTTCATCATGAGGCCGCGACGGAGTGGCGAGCCACACATCTT
TAG
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