Ggra8185.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8185.t1
Unique NameGgra8185.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length180
Homology
BLAST of Ggra8185.t1 vs. uniprot
Match: R7QDQ9 (Small GTP-binding protein Arf1 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7QDQ9_CHOCR)

HSP 1 Score: 340 bits (872), Expect = 5.160e-118
Identity = 166/179 (92.74%), Postives = 175/179 (97.77%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPSMPNRKWFVQACCATNGTGLYEGLDWLTENISD 179
            MGL+ISK+  SLLG+KEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKN++FTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRI EARDELKKMLSEEELRNATVLVFANKQDLPNAM VADLTQELGLP+MPNRKWFVQACCATNGTGLYEGLDWLTEN+++
Sbjct:    1 MGLTISKLFTSLLGKKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIAEARDELKKMLSEEELRNATVLVFANKQDLPNAMAVADLTQELGLPNMPNRKWFVQACCATNGTGLYEGLDWLTENLAE 179          
BLAST of Ggra8185.t1 vs. uniprot
Match: ADP-ribosylation factor 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1BD1 (ADP-ribosylation factor 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1BD1)

HSP 1 Score: 319 bits (817), Expect = 1.170e-109
Identity = 154/175 (88.00%), Postives = 167/175 (95.43%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPSMPNRKWFVQACCATNGTGLYEGLDWLTE 175
            MGLSISK+ ASL+G+++VRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNV FTVWDVGGQDKIRPLWRHYF NTQGL+YVVDSNDR+R+ EAR+EL KM+ EEELRNA+VLVFANKQDLPNAMPVADLTQELGLP++  RKWFVQACCATNGTGLYEGLDWLTE
Sbjct:    1 MGLSISKLFASLMGKRDVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVSFTVWDVGGQDKIRPLWRHYFANTQGLVYVVDSNDRERVAEAREELLKMIGEEELRNASVLVFANKQDLPNAMPVADLTQELGLPNLAGRKWFVQACCATNGTGLYEGLDWLTE 175          
BLAST of Ggra8185.t1 vs. uniprot
Match: A0A7S2ZI95 (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZI95_9RHOD)

HSP 1 Score: 311 bits (796), Expect = 2.060e-106
Identity = 150/179 (83.80%), Postives = 167/179 (93.30%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPSMPNRKWFVQACCATNGTGLYEGLDWLTENISD 179
            MGL+ SK+ ASL+G+KE RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV+YKN+ FTVWDVGGQDKIRPLWRHYFQNTQGLI+VVDSNDRDR+ EAR+ELKKML EEELR+AT+LVFANKQDLPNAM V++LTQ+L LPSM NRKW+VQACCAT G GLYEGLDWLT+N+ D
Sbjct:    1 MGLTFSKLFASLVGKKECRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNINFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEAREELKKMLFEEELRDATILVFANKQDLPNAMSVSELTQKLELPSMRNRKWYVQACCATKGDGLYEGLDWLTDNLPD 179          
BLAST of Ggra8185.t1 vs. uniprot
Match: A0A8H3TPZ7 (Uncharacterized protein n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3TPZ7_9TREE)

HSP 1 Score: 293 bits (751), Expect = 1.540e-99
Identity = 138/179 (77.09%), Postives = 165/179 (92.18%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPSMPNRKWFVQACCATNGTGLYEGLDWLTENISD 179
            MGLS+SK+L+SL G+KE+RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV+YKN+ FTVWDVGGQDKIRPLWRHYFQNTQG+I+VVDSNDRDR+ EAR+EL++MLSE+EL++A +LVFANKQDLPNAM  +DLT  LGL S+ NRKW++Q+ CAT+G GLYEGL+WL+ N+ +
Sbjct:    1 MGLSVSKLLSSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVSEAREELQRMLSEDELKDALLLVFANKQDLPNAMSASDLTDRLGLHSLRNRKWYIQSACATSGDGLYEGLEWLSTNLKN 179          
BLAST of Ggra8185.t1 vs. uniprot
Match: ARF/SAR n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI00044090DB (ARF/SAR n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI00044090DB)

HSP 1 Score: 293 bits (750), Expect = 2.180e-99
Identity = 138/177 (77.97%), Postives = 163/177 (92.09%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPSMPNRKWFVQACCATNGTGLYEGLDWLTENI 177
            MG++ SK+  SL+G+KE+RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV+YKN+ FTVWDVGGQDKIRPLWRHYFQNTQG+I+VVDSNDRDRI EAR+EL++ML+E+ELRNA +LVFANKQDLPNAM  A++T +LGLPS+ NR W++QA CAT+G GLYEGL+WL+ NI
Sbjct:    1 MGMTFSKIFQSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRIVEAREELQRMLNEDELRNALLLVFANKQDLPNAMNAAEITDKLGLPSLQNRIWYIQAACATSGDGLYEGLEWLSHNI 177          
BLAST of Ggra8185.t1 vs. uniprot
Match: M2WZR6 (ADP-ribosylation factor n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WZR6_GALSU)

HSP 1 Score: 292 bits (748), Expect = 4.260e-99
Identity = 139/178 (78.09%), Postives = 160/178 (89.89%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPSMPNRKWFVQACCATNGTGLYEGLDWLTENIS 178
            MGLSISK+L+ L G+KE+RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV+YKN+ FTVWDVGGQDKIRPLWRHYFQNTQG+I+VVDSNDR+R PEAR+EL KMLSEEELR+A +LVFANKQDLPNA   A++   L LPS+ NR WF+ +CCATNG GL+EGLDWL++ +S
Sbjct:    1 MGLSISKLLSRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGVIFVVDSNDRERFPEAREELHKMLSEEELRDAVLLVFANKQDLPNAASTAEVVNALALPSLRNRTWFIMSCCATNGDGLFEGLDWLSDQLS 178          
BLAST of Ggra8185.t1 vs. uniprot
Match: M1CC02 (ADP-ribosylation factor, arf n=15 Tax=Solanaceae TaxID=4070 RepID=M1CC02_SOLTU)

HSP 1 Score: 291 bits (745), Expect = 1.260e-98
Identity = 141/178 (79.21%), Postives = 160/178 (89.89%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPSMPNRKWFVQACCATNGTGLYEGLDWLTENIS 178
            MG+SISK +  L  +KE+RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV+YKN  FTVWDVGGQDKIRPLWRHYFQNTQGLI+VVDSNDRDRI EARDEL +ML+EEELR AT+LVFANKQDLPNAM VAD+T +LGL S+  R+W++Q+ CAT+G GLYEGLDWL+ NI+
Sbjct:    1 MGMSISKFVKMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNSSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRISEARDELHRMLNEEELRGATILVFANKQDLPNAMNVADITDKLGLHSLRQRRWYIQSACATSGQGLYEGLDWLSHNIT 178          
BLAST of Ggra8185.t1 vs. uniprot
Match: ADP-ribosylation factor n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=UPI001E8CF29E (ADP-ribosylation factor n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=UPI001E8CF29E)

HSP 1 Score: 291 bits (744), Expect = 1.850e-98
Identity = 137/177 (77.40%), Postives = 163/177 (92.09%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPSMPNRKWFVQACCATNGTGLYEGLDWLTENI 177
            MGL+ SK+  ++ G+KE+RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKN+ FTVWDVGGQDKIRPLWRHYFQNTQG+I+VVDSNDRDR+ EAR+EL++MLSE+ELR+A +LVFANKQDLPNAM  ADLT +LGLPS+ +R+W++QA CAT+G GLYEGL+WL+ N+
Sbjct:    1 MGLNFSKLFNNMFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVAEAREELQRMLSEDELRDALLLVFANKQDLPNAMNAADLTNKLGLPSLQSRQWYIQAACATSGDGLYEGLEWLSLNL 177          
BLAST of Ggra8185.t1 vs. uniprot
Match: M5WK44 (Uncharacterized protein n=27 Tax=Mesangiospermae TaxID=1437183 RepID=M5WK44_PRUPE)

HSP 1 Score: 290 bits (743), Expect = 2.630e-98
Identity = 138/178 (77.53%), Postives = 162/178 (91.01%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPSMPNRKWFVQACCATNGTGLYEGLDWLTENIS 178
            MG++IS+++  L  +KE+RILMVGLDAAGKTTILYKLKLGE+VTTIPTIGFNVETV+YKNV FTVWDVGGQDKIRPLWRHYFQNTQGLI+VVDSNDRDR+ EARDEL +MLSE+ELR AT+LVFANKQDLPNAM V+++T +LGL S+  R+W++QA CAT+G GLYEGLDWL+ NIS
Sbjct:    1 MGMAISRMVKMLFARKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVSEARDELHRMLSEDELREATLLVFANKQDLPNAMSVSEITDKLGLHSLRQRRWYIQAACATSGQGLYEGLDWLSSNIS 178          
BLAST of Ggra8185.t1 vs. uniprot
Match: A0A3S3Q2S8 (ADP-ribosylation factor 1 isoform X2 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3Q2S8_9MAGN)

HSP 1 Score: 290 bits (743), Expect = 2.630e-98
Identity = 138/178 (77.53%), Postives = 162/178 (91.01%), Query Frame = 0
Query:    1 MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRIPEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPSMPNRKWFVQACCATNGTGLYEGLDWLTENIS 178
            MG++IS+++  L  +KE+RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNV FTVWDVGGQDKIRPLWRHYFQNTQGLI+V+DSND++RI EARDEL +MLSEEELR+AT+LVFANKQDLPNAM V+++T +LGL S+  R+W++Q+ CAT G GLYEGLDWL+ NIS
Sbjct:    1 MGMTISRLIRQLFSRKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVIDSNDKERISEARDELHRMLSEEELRDATLLVFANKQDLPNAMSVSEITDKLGLHSLRQRRWYIQSACATTGEGLYEGLDWLSNNIS 178          
The following BLAST results are available for this feature:
BLAST of Ggra8185.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QDQ95.160e-11892.74Small GTP-binding protein Arf1 n=2 Tax=Rhodymeniop... [more]
ADP-ribosylation factor 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1BD11.170e-10988.00ADP-ribosylation factor 1-like n=1 Tax=Mercenaria ... [more]
A0A7S2ZI952.060e-10683.80Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
A0A8H3TPZ71.540e-9977.09Uncharacterized protein n=1 Tax=Naganishia liquefa... [more]
ARF/SAR n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI00044090DB2.180e-9977.97ARF/SAR n=1 Tax=Fomitiporia mediterranea (strain M... [more]
M2WZR64.260e-9978.09ADP-ribosylation factor n=2 Tax=Galdieria sulphura... [more]
M1CC021.260e-9879.21ADP-ribosylation factor, arf n=15 Tax=Solanaceae T... [more]
ADP-ribosylation factor n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=UPI001E8CF29E1.850e-9877.40ADP-ribosylation factor n=1 Tax=Filobasidium flori... [more]
M5WK442.630e-9877.53Uncharacterized protein n=27 Tax=Mesangiospermae T... [more]
A0A3S3Q2S82.630e-9877.53ADP-ribosylation factor 1 isoform X2 n=1 Tax=Cinna... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 19..42
score: 52.45
coord: 74..99
score: 33.26
coord: 119..140
score: 32.09
coord: 47..71
score: 33.41
IPR006689Small GTPase superfamily, ARF/SAR typeSMARTSM00178sar_sub_1coord: 5..177
e-value: 4.3E-29
score: 112.6
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 6..177
e-value: 2.5E-77
score: 258.3
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 18..169
e-value: 6.0E-4
score: -60.5
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..179
e-value: 6.9E-115
score: 397.6
NoneNo IPR availablePANTHERPTHR11711:SF383ADP-RIBOSYLATION FACTOR A1Bcoord: 1..178
NoneNo IPR availablePROSITEPS51417ARFcoord: 11..177
score: 25.219767
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 16..137
e-value: 1.9E-22
score: 77.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 5..179
e-value: 1.5E-79
score: 267.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..177
IPR024156Small GTPase superfamily, ARF typePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..178
IPR045872ADP-ribosylation factor 1-5CDDcd04150Arf1_5_likecoord: 18..176
e-value: 1.03943E-111
score: 312.804

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000872_piloncontigtig00000872_pilon:58387..59258 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8185.t1Ggra8185.t1Gracilaria gracilis GNS1m malemRNAtig00000872_pilon 58387..59258 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8185.t1 ID=Ggra8185.t1|Name=Ggra8185.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=180bp
MGLSISKVLASLLGQKEVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG
FNVETVDYKNVKFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRDRI
PEARDELKKMLSEEELRNATVLVFANKQDLPNAMPVADLTQELGLPSMPN
RKWFVQACCATNGTGLYEGLDWLTENISD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
IPR024156Small_GTPase_ARF
IPR045872Arf1-5-like