Ggra8212.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8212.t1
Unique NameGgra8212.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length757
Homology
BLAST of Ggra8212.t1 vs. uniprot
Match: A0A2V3J5U4 (ERAD-associated E3 ubiquitin-protein ligase HRD1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5U4_9FLOR)

HSP 1 Score: 585 bits (1507), Expect = 1.520e-195
Identity = 433/792 (54.67%), Postives = 499/792 (63.01%), Query Frame = 0
Query:    1 MALVSVLLIWRLTQLIFLGPLRFRELERLHLRARDAIIEYCFAISVFRDDFNTRFVALIMTLLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLAATCIQATLQSNGRSMFVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANMHEVVDEVTEEELQQGDRTCIICREEMESAIKLVCGHIFHRRCLENWLKRQLSCPTCRATIDVNRGARNREGSANQNQNGNQQQPAANAAGGQAVTPNQAQRPLQPGQXXXXXXXXXXXXXXXXXXXXXAN--IGEAGARLLNFANQWINQVMNEAGMRPQ-ANAQNPNAXXXXXXXXXXXXXXXXXXXXXXXXXXANW---LQNRDMAAYANQQGAQPQNQNAFNPGLP---GPNAIAHMQLRARRRGAFAGLRQ-YPPMYRVRLPPLNNAANAMNNTPNQNANPTTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGTAGSSXXXXXXXXXXT----PNPFASVQTASSSRGP--AVSHAQASSSGSSSVRAESQVPRAAQ--TNHLSATSAAIQMALGYPLGTGAQALPLERLFEIQRQIEVLRSEVQSLVLYATEAQLSAMESEEQQQNDAQESSEVAASE----GQNTTTNDV--AQASASVGASSTDAANAA-------------SAVESTQNVAADAGAEQGDEAEQEVTENGSGVRNEEEDSEAERIRRRRIEFLERTSR 755
            MALVS+LL+WR+ QLIFLGPLRFRELERL LRARDAIIEYCFAISVFRDDFN RFVAL+MT+LLLKSLHWLAKDRTD+LEEQ   P RTH+RLVGLL+LL  LDCFLA TC++ T  SNGRSM+VLFSFEFTLL IELA+NVFQY+F LIDQRM GRW SKG+F+FYA+LLCD+STLT YI+F +YV +YYSFP+HI+RE YVTLSKFQR+C DFLRYRRVVANM+EVV+EVTEEELQQGDRTCIICREEMESAIKL CGH+FH RCL++WLKRQLSCPTCRATIDV+R A     S NQN N             Q   P           X    XXXXXXXXX        N  +GEAGARL NFANQWINQVMNEAG++ Q AN   PN      X     XXXXXXXXXXXXXXX +       + +AA A  Q     + NAF P  P   G NAIAHMQLRARRRGA A L Q Y   YRV+LPPLNN A   N   +   NP                               Q    SSXXXXXXXXXX     P+  A+  TAS + G      H       +   + E  +    Q   N L A   AI            +ALPLERLF+IQRQIEVLRSEVQ LVL  TEAQ++ M++  Q  ND  E +  A +E     +  T N+   +Q  A+    +    N A               + +TQ   A A A Q  +   E  EN +    ++EDS AERIRRRR++FLER +R
Sbjct:   54 MALVSILLVWRIIQLIFLGPLRFRELERLQLRARDAIIEYCFAISVFRDDFNYRFVALVMTVLLLKSLHWLAKDRTDFLEEQPLSPFRTHMRLVGLLILLCSLDCFLAVTCVRITFNSNGRSMYVLFSFEFTLLLIELASNVFQYVFLLIDQRMQGRWESKGLFTFYADLLCDMSTLTFYIIFLVYVHLYYSFPFHILRELYVTLSKFQRRCTDFLRYRRVVANMNEVVEEVTEEELQQGDRTCIICREEMESAIKLACGHMFHPRCLQSWLKRQLSCPTCRATIDVDRSA-----SRNQNDNSXXXXXXXXXXXNQRAQPENXXXXXXXXXXLQQIXXXXXXXXXPLHPNAPQNPHLGEAGARLYNFANQWINQVMNEAGIQQQPANGAPPNGANPPPXNARNQXXXXXXXXXXXXXXXXSMHPRTLQQQVAAQAQHQNGHRLHPNAF-PQYPFPAGQNAIAHMQLRARRRGALASLPQAYDQQYRVQLPPLNNLAGHRNRAQDHPTNPAAQTEPEANMESSNTNAQSISDVEQTSTASRQPAPSSSXXXXXXXXXXXXXXXPSQTANRSTASRTAGDRSTAGHPGRPMEPAPMTQYELGLRSGIQFYLNILRARDQAIAQR-----AAATRALPLERLFDIQRQIEVLRSEVQDLVLQVTEAQVNTMDNTAQDNNDQLEQTTAAPAETETRSEERTANEAMNSQEEAASDDITEQVPNTAREHSVADEREPVEEPLSTTQASDASASASQEVQGGDEERENDA----DDEDSVAERIRRRRLQFLERNNR 830          
BLAST of Ggra8212.t1 vs. uniprot
Match: R7QRC3 (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRC3_CHOCR)

HSP 1 Score: 404 bits (1038), Expect = 1.680e-124
Identity = 213/388 (54.90%), Postives = 269/388 (69.33%), Query Frame = 0
Query:    1 MALVSVLLIWRLTQLIFLGPLRFRELERLHLRARDAIIEYCFAISVFRDDFNTRFVALIMTLLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLAATCIQATLQSNGRSMFVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANMHEVVDEVTEEELQQGDRTCIICREEMESAIKLVCGHIFHRRCLENWLKRQLSCPTCRATIDVNRGARNREGSANQNQNGNQQQPAANAAGGQAVTPNQAQRPLQPGQXXXXXXXXXXXXXXXXXXXXXANIGEAGARLLNFANQWINQVMNEA--GMRPQANA 386
            MAL S LL+WR+ Q +FLGPLRFRE+ERLH+RARDA+IE CFAISVFR+D + RFVA  MTLLLLKSLHWL+KDR ++LEEQ   P+RTH+RLVGL+  L  LD FL       TL + G +M+VLF+FE+T++ IEL +++ +Y+F +ID+ M+G W  K ++SFY ELL DL  LT+Y++FFIYVQ +YS P+HIIRE +VT SKF+R+C+DFLRYRRVVA M+++  + TEEEL +GDRTCIICREEM++A KL CGH+FH RCL+NWLKRQLSCPTCRA IDVN               G+Q   A N      +       P                          AN+G+AGARL+N ANQW+NQVM +A  G  P ANA
Sbjct:   50 MALASALLLWRVLQAVFLGPLRFREVERLHIRARDAVIECCFAISVFREDLDARFVAFFMTLLLLKSLHWLSKDRIEFLEEQPLTPVRTHLRLVGLMSALLVLDIFLVQRFATITLTTEGATMYVLFAFEYTIIVIELLSDIVKYVFLVIDRSMEGHWEEKNMYSFYIELLSDLCQLTVYVLFFIYVQYFYSMPFHIIREVWVTFSKFRRRCSDFLRYRRVVATMNDLFADATEEELVEGDRTCIICREEMQTAKKLACGHLFHARCLQNWLKRQLSCPTCRAVIDVNGP-------------GSQSPQAQNPNMNNPLNALHINNPNNINNGFNFRANANMNNNGAVPLNQAANVGDAGARLVNLANQWLNQVMVDARAGGGPGANA 424          
BLAST of Ggra8212.t1 vs. uniprot
Match: A0A7S0ZHY2 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZHY2_9RHOD)

HSP 1 Score: 311 bits (797), Expect = 7.560e-96
Identity = 154/292 (52.74%), Postives = 210/292 (71.92%), Query Frame = 0
Query:    4 VSVLLIWRLTQLIFLGPLRFRELERLHLRARDAIIEYCFAISVFRDDFNTRFVALIMTLLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLAATCIQATLQSNGRSMFVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANMHEVVDEVTEEELQQGDRTCIICREEMESAIKLVCGHIFHRRCLENWLKRQLSCPTCRATIDVN-RGARNR 294
            V +LL+ +  Q +FLGPLRFRE ERL +R R+A+IE C A++VFR++FN++F+ L   LL LK  HWL++DR +Y+EEQ   PL  H RL+ L+ +L  LD  L  +C   T+Q  G S  VLF+FEF +L I L + + +Y     D  ++GRW +KG+ SFY ELLCD S L +YI FF+YVQ +Y+ P HIIR+ Y+T +KF ++C DFLRYRRV ++M+E+  + TE++   GDRTCIICREEM+SA KL CGHIFH RCL++WL+RQLSCP CRA ++V+ RG+  R
Sbjct:   54 VCLLLVGKFMQAVFLGPLRFREEERLQVRIREAVIESCLAMTVFREEFNSKFIGLFAVLLFLKIFHWLSRDRVEYMEEQPNAPLLAHARLISLMAVLFALDIRLVVSCATYTMQ-YGPSFLVLFAFEFAVLSISLISTITRYGLNSADSYLEGRWDAKGMISFYNELLCDASQLIVYIAFFLYVQAFYTLPLHIIRDIYLTFTKFHKRCVDFLRYRRVASSMNELFPDATEQDFSDGDRTCIICREEMQSAKKLNCGHIFHVRCLQSWLRRQLSCPVCRANVEVSTRGSNTR 344          
BLAST of Ggra8212.t1 vs. uniprot
Match: A0A7S1TGM3 (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TGM3_9RHOD)

HSP 1 Score: 308 bits (788), Expect = 1.300e-90
Identity = 168/325 (51.69%), Postives = 215/325 (66.15%), Query Frame = 0
Query:    3 LVSVLLIWRLTQLIFLGPLRFRELERLHLRARDAIIEYCFAISVF---RDDFNTRFVALIMTLLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLAATCIQATLQSNGRSMFVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANMHEVVDEVTEEELQQGDRTCIICREEMESAIKLVCGHIFHRRCLENWLKRQLSCPTCRATIDVNRGARNRE-GSANQNQNGNQQQPAANAAGGQAVTPNQ 323
            L +V+L+ ++ Q IFLG LRFRE ERL +R R+A++E C A+SVF   R DF+ RF+  +  LL +K+ HWLAKDR D++EEQ   PLR+H+RL  LL+     D  L    I      N   + VLF+FEFTLLFI ++ N  +YI  LID +MDGRW  +  FSFYAEL+ D+S L +Y+ FF+YV  +YS P HIIR+ Y+T S FQR+C DFLRYR+V+  M+E+    TEEEL   DR CIICRE+M+SA KL CGH+FH RCL++WLKRQ  CPTCRA ID   GA  R+   A Q Q G+    AA   G Q   P Q
Sbjct:   52 LATVVLVGKMVQWIFLGQLRFRETERLQIRMREAVVETCLAMSVFKFDRTDFDARFLLFLSILLFMKTFHWLAKDRVDFMEEQPLVPLRSHLRLTFLLLXXXXXDLVLLYWSIIYGALRNQYPILVLFTFEFTLLFITISWNAVRYILLLIDLKMDGRWDDRSTFSFYAELVADVSQLLVYMAFFVYVLFHYSLPLHIIRDIYITFSNFQRRCNDFLRYRKVLNEMNELFPNATEEELDAADRVCIICREDMQSAKKLNCGHLFHPRCLQSWLKRQRICPTCRAAIDFRGGAARRDQAGAGQGQAGD----AARLPGPQNALPQQ 372          
BLAST of Ggra8212.t1 vs. uniprot
Match: A0A5J4YLY9 (ERAD-associated E3 ubiquitin-protein ligase HRD1B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLY9_PORPP)

HSP 1 Score: 293 bits (749), Expect = 1.060e-85
Identity = 142/285 (49.82%), Postives = 204/285 (71.58%), Query Frame = 0
Query:    5 SVLLIWRLTQLIFLGPLRFRELERLHLRARDAIIEYCFAISVFRDDFNTRFVALIMTLLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLAATCIQATLQSNGRSMFVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANMHEVVDEVTEEELQQGDRTCIICREEMESA--IKLVCGHIFHRRCLENWLKRQLSCPTCRATIDV 287
            SVL++ ++ Q +FLGPLRFRE ERL +R RDA+IE C A++VFRD+F+ +F  +   LL +K  HWL++DR + +EEQL  P+RTH++LV L+++L   D ++   CI  T+ + G SM VLF+FEF +L + L + + +Y F +ID R DG W +KG+ SFY EL+ D   L +YI FF+YVQ +Y+ P HIIR+ Y+T +KFQ++ +DF+RYR+V + M+E+  E TEE+ +Q DR CIICR+EM ++   KL C HIFH  CL+ WL+RQL+CP CR  I+V
Sbjct:   54 SVLVLGKVIQSVFLGPLRFREQERLQIRVRDAVIETCLAMTVFRDEFDAKFFGMFAVLLFVKVFHWLSRDRVENMEEQLLVPVRTHMKLVFLMLMLLLTDVYVLVQCISITV-TKGPSMLVLFTFEFAVLLLWLVSTMVRYAFQVIDARYDGHWEAKGLCSFYNELISDFLQLVVYIAFFMYVQAFYTLPLHIIRDIYLTFNKFQKRVSDFIRYRKVASTMNELFSEPTEEDFEQMDRICIICRDEMSTSGCKKLGCNHIFHTHCLQGWLRRQLNCPVCRTAIEV 337          
BLAST of Ggra8212.t1 vs. uniprot
Match: A0A1X6NM01 (RING-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NM01_PORUM)

HSP 1 Score: 294 bits (752), Expect = 9.190e-84
Identity = 148/291 (50.86%), Postives = 203/291 (69.76%), Query Frame = 0
Query:    1 MALVSVLLIWRLTQLIFLGPLRFRELERLHLRARDAIIEYCFAISVFRDDFNTRFVALIMTLLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLAATCIQATLQSNGRSMFVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANMHEVVDEVTEEELQQGDRTCIICREEMESAIKLVCGHIFHRRCLENWLKRQLSCPTCRATIDVNRGA 291
            M L +VL+  +  Q +FLG LRFRE+ERL+LR R+A+IE C A++VFRDDFNT F+ +   LL LK  HWLAKDR ++LEEQ   P  T++RL+ L+++L  +D  L   C+  TL+  G +M  LF+FEFT+L IEL +++ ++   ++D    GRW  K + +FYAEL+ D   L +Y+ FF++V  +Y  P HI+R+ YV  ++ QR+  DF+RYRRVVA M ++  + T EEL   D TCIICREEM +A KL CGHIFH RCL++WLKRQLSCPTCRA +DV+  A
Sbjct:   50 MLLATVLVAGKTVQRLFLGSLRFREVERLYLRIREAVIETCLAMTVFRDDFNTNFILMFGMLLFLKVFHWLAKDRIEFLEEQPLSPRSTYVRLLCLMLMLFSVDARLLIACLHYTLE-YGHTMVALFAFEFTVLLIELCSHIVRFTLHVVDVACAGRWEGKAMVAFYAELVADALQLVVYVAFFVHVLTFYPLPIHILRDLYVAATRLQRRVFDFMRYRRVVATMSQLFADATPEELAAADATCIICREEMVAAKKLACGHIFHARCLQSWLKRQLSCPTCRAPVDVSPSA 339          
BLAST of Ggra8212.t1 vs. uniprot
Match: A0A0D2QXA5 (RING-type domain-containing protein n=3 Tax=Malvoideae TaxID=214907 RepID=A0A0D2QXA5_GOSRA)

HSP 1 Score: 258 bits (659), Expect = 1.490e-75
Identity = 123/285 (43.16%), Postives = 194/285 (68.07%), Query Frame = 0
Query:    1 MALVSVLLIWRLTQLIFLGPLRFRELERLHLRARDAIIEYCFAISVFRDDFNTRFVALIMTLLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLAATCIQATLQSNGRSMFVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANMHEVVDEVTEEELQQGDRTCIICREEMESAIKLVCGHIFHRRCLENWLKRQLSCPTCRATI 285
            M LV + ++W++T+ IFLG LR  E+ERL+ ++   ++E  FAI++FR DF+  F+A++  LLL+K+LHWLA+ R +Y+E     P+ +HIR+V  L  L  LDC   ++ I+  +Q+   S+ + F+FE+ +L   + +N  +Y+F++ D  M+G+W  K V++FY EL+ DL  L++Y+ FF+ + + Y  P H+IRE Y T   F+ + AD++RYR++ +NM++   + T EEL   D TCIICREEM +A KL+CGH+FH  CL +WL+RQ +CPTCRA +
Sbjct:   49 MGLVFMCILWQITKKIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPSVPMLSHIRIVSFLGFLLLLDCLFLSSSIKFLIQTRQASVSLFFAFEYMILATTIVSNFIKYVFYVSDMLMEGQWEKKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYGVPLHLIRELYETFRNFKIRVADYMRYRKIASNMNDRFPDATAEELAANDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALV 333          
BLAST of Ggra8212.t1 vs. uniprot
Match: A0A3L6FPH1 (RING-type domain-containing protein n=5 Tax=Zea mays TaxID=4577 RepID=A0A3L6FPH1_MAIZE)

HSP 1 Score: 261 bits (667), Expect = 2.400e-75
Identity = 135/325 (41.54%), Postives = 209/325 (64.31%), Query Frame = 0
Query:    3 LVSVLLIWRLTQLIFLGPLRFRELERLHLRARDAIIEYCFAISVFRDDFNTRFVALIMTLLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLAATCIQATLQSNGRSMFVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANMHEVVDEVTEEELQQGDRTCIICREEMESAIKLVCGHIFHRRCLENWLKRQLSCPTCRATI---DVNRGARNREGSANQNQNGNQQQPAANAAGGQAVTPNQA 324
            LV++ + W+L + +FLG LR  E+ERL+ ++   +IE  FA+++FR DF+  F+A++  LLL+K+LHWLA+ R +Y+E     PL +HIR+V  ++ L  +DC   +  +++ +Q    S+ + FSFE+T+L     +   +YIF++ D  M+G+W  K V++FY EL+ DL  L++Y++FFI + + Y  P H+IRE Y T   F+ + AD++RYR++ +NM+E   E T EEL   D TCIICREEM +A KL+CGH+FH  CL +WL+RQ +CPTCRA I   D  R A +R+  A          P++  A G+ ++  QA
Sbjct:   51 LVAMCVAWQLARRLFLGSLREAEVERLNEQSWREVIEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLAQKRVEYIETTPSVPLLSHIRIVSFMVFLLTVDCLFLSNSLRSLIQKREASVAIFFSFEYTILATSTLSTFVKYIFYVSDMLMEGQWERKAVYTFYLELISDLVHLSLYMLFFIAIFLNYGVPLHLIRELYETFRSFRIRIADYIRYRKITSNMNERFPEATSEELDASDATCIICREEMTTAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPIVPADNGRAASSRQHGAQAGVQPGTATPSSEGAPGENMSRRQA 375          
BLAST of Ggra8212.t1 vs. uniprot
Match: A0A3L6FPP6 (RING-type domain-containing protein n=2 Tax=Zea mays TaxID=4577 RepID=A0A3L6FPP6_MAIZE)

HSP 1 Score: 260 bits (664), Expect = 2.800e-75
Identity = 130/299 (43.48%), Postives = 199/299 (66.56%), Query Frame = 0
Query:    3 LVSVLLIWRLTQLIFLGPLRFRELERLHLRARDAIIEYCFAISVFRDDFNTRFVALIMTLLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLAATCIQATLQSNGRSMFVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANMHEVVDEVTEEELQQGDRTCIICREEMESAIKLVCGHIFHRRCLENWLKRQLSCPTCRATI---DVNRGARNREGSA 298
            LV++ + W+L + +FLG LR  E+ERL+ ++   +IE  FA+++FR DF+  F+A++  LLL+K+LHWLA+ R +Y+E     PL +HIR+V  ++ L  +DC   +  +++ +Q    S+ + FSFE+T+L     +   +YIF++ D  M+G+W  K V++FY EL+ DL  L++Y++FFI + + Y  P H+IRE Y T   F+ + AD++RYR++ +NM+E   E T EEL   D TCIICREEM +A KL+CGH+FH  CL +WL+RQ +CPTCRA I   D  R A +R+  A
Sbjct:  127 LVAMCVAWQLARRLFLGSLREAEVERLNEQSWREVIEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLAQKRVEYIETTPSVPLLSHIRIVSFMVFLLTVDCLFLSNSLRSLIQKREASVAIFFSFEYTILATSTLSTFVKYIFYVSDMLMEGQWERKAVYTFYLELISDLVHLSLYMLFFIAIFLNYGVPLHLIRELYETFRSFRIRIADYIRYRKITSNMNERFPEATSEELDASDATCIICREEMTTAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPIVPADNGRAASSRQHGA 425          
BLAST of Ggra8212.t1 vs. uniprot
Match: HRD1B (ERAD-associated E3 ubiquitin-protein ligase HRD1B n=11 Tax=Camelineae TaxID=980083 RepID=HRD1B_ARATH)

HSP 1 Score: 259 bits (661), Expect = 9.750e-75
Identity = 127/285 (44.56%), Postives = 190/285 (66.67%), Query Frame = 0
Query:    1 MALVSVLLIWRLTQLIFLGPLRFRELERLHLRARDAIIEYCFAISVFRDDFNTRFVALIMTLLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLAATCIQATLQSNGRSMFVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANMHEVVDEVTEEELQQGDRTCIICREEMESAIKLVCGHIFHRRCLENWLKRQLSCPTCRATI 285
            M LV +L +W L +++FLG LR  E+ERL+ +A   ++E  FAI++FR DF+  F++L++TLLL+K LHW+A+ R +Y+E      L +H+R+V  ++ L  LDC L  + IQ  +QS   SM V F+FE+ +L     + + +Y F++ D   +G+W  K V++FY EL+ DL  L++Y+ FF+ + + Y  P H+IRE Y T   F+ +  D+LRYR++ +NM++   + T EEL   D TCIICREEM SA KLVCGH+FH  CL +WL+RQ +CPTCRA +
Sbjct:   49 MGLVLMLSLWNLVKIVFLGSLREAEVERLNEQAWRELMEILFAITIFRQDFSVGFISLVVTLLLIKGLHWMAQKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYMILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYGLPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALV 333          
The following BLAST results are available for this feature:
BLAST of Ggra8212.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5U41.520e-19554.67ERAD-associated E3 ubiquitin-protein ligase HRD1 n... [more]
R7QRC31.680e-12454.90RING-type domain-containing protein n=1 Tax=Chondr... [more]
A0A7S0ZHY27.560e-9652.74Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S1TGM31.300e-9051.69Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A5J4YLY91.060e-8549.82ERAD-associated E3 ubiquitin-protein ligase HRD1B ... [more]
A0A1X6NM019.190e-8450.86RING-type domain-containing protein n=1 Tax=Porphy... [more]
A0A0D2QXA51.490e-7543.16RING-type domain-containing protein n=3 Tax=Malvoi... [more]
A0A3L6FPH12.400e-7541.54RING-type domain-containing protein n=5 Tax=Zea ma... [more]
A0A3L6FPP62.800e-7543.48RING-type domain-containing protein n=2 Tax=Zea ma... [more]
HRD1B9.750e-7544.56ERAD-associated E3 ubiquitin-protein ligase HRD1B ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 244..281
e-value: 4.9E-7
score: 39.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 243..282
e-value: 1.0E-10
score: 41.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 244..282
score: 13.005633
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 216..295
e-value: 4.5E-22
score: 79.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 483..592
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 651..710
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..398
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 485..592
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..352
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 727..756
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 651..756
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..420
NoneNo IPR availablePANTHERPTHR22765:SF288ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE HRD1Bcoord: 1..312
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 1..312
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 151..169
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 192..756
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..150
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..121
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..92
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 170..191
NoneNo IPR availableCDDcd16479RING-H2_synoviolincoord: 241..282
e-value: 3.37057E-22
score: 87.7387
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 224..291
NoneNo IPR availableTMHMMTMhelixcoord: 127..149
NoneNo IPR availableTMHMMTMhelixcoord: 55..72
NoneNo IPR availableTMHMMTMhelixcoord: 170..192
NoneNo IPR availableTMHMMTMhelixcoord: 93..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000872_piloncontigtig00000872_pilon:150741..153011 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8212.t1Ggra8212.t1Gracilaria gracilis GNS1m malemRNAtig00000872_pilon 150741..153011 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8212.t1 ID=Ggra8212.t1|Name=Ggra8212.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=757bp
MALVSVLLIWRLTQLIFLGPLRFRELERLHLRARDAIIEYCFAISVFRDD
FNTRFVALIMTLLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLL
AFLDCFLAATCIQATLQSNGRSMFVLFSFEFTLLFIELAANVFQYIFFLI
DQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIRE
FYVTLSKFQRKCADFLRYRRVVANMHEVVDEVTEEELQQGDRTCIICREE
MESAIKLVCGHIFHRRCLENWLKRQLSCPTCRATIDVNRGARNREGSANQ
NQNGNQQQPAANAAGGQAVTPNQAQRPLQPGQQPAQRQQQPPRPQAGQAG
PQNANIGEAGARLLNFANQWINQVMNEAGMRPQANAQNPNAPNANNAQAN
HHHHHHHHHHHRNQANLANWLQNRDMAAYANQQGAQPQNQNAFNPGLPGP
NAIAHMQLRARRRGAFAGLRQYPPMYRVRLPPLNNAANAMNNTPNQNANP
TTLGQPPTSGSPEQAAASSHANAPNQPNIPQQGTAGSSSATAAASSSSTP
NPFASVQTASSSRGPAVSHAQASSSGSSSVRAESQVPRAAQTNHLSATSA
AIQMALGYPLGTGAQALPLERLFEIQRQIEVLRSEVQSLVLYATEAQLSA
MESEEQQQNDAQESSEVAASEGQNTTTNDVAQASASVGASSTDAANAASA
VESTQNVAADAGAEQGDEAEQEVTENGSGVRNEEEDSEAERIRRRRIEFL
ERTSRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD