Ggra1011.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1011.t1
Unique NameGgra1011.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length166
Homology
BLAST of Ggra1011.t1 vs. uniprot
Match: A0A2V3IGF5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGF5_9FLOR)

HSP 1 Score: 163 bits (412), Expect = 2.230e-48
Identity = 81/135 (60.00%), Postives = 98/135 (72.59%), Query Frame = 0
Query:    5 VLNAVVVFSALATFSIAASLDLEDEAERFPERCDVPSDVAYCMDVMRVGTMFNDHTAEQFVRLETQLSEHALEECSWESFEGKRSPEECISTLSRFAEDNTALVDTPNDLDVSEHAL--DKICYKVCKAAKCFKC 137
            +LN +VV  AL   S+ +SL L D  ER  E C++PSDVAYCMDVMRVGT FND +A+ F RLE  LSEHALEECSWESFEGK+SP+ECISTLSRF+E++   + +  DLD SEH +  +K CY  CK  K  KC
Sbjct:    4 ILNTLVVLCALFYISVGSSLKLHDTEERMSEPCNIPSDVAYCMDVMRVGTRFNDESAQHFARLEDLLSEHALEECSWESFEGKKSPDECISTLSRFSENSVPPISSSTDLDFSEHIVRVNKACYNACKIVKGLKC 138          
BLAST of Ggra1011.t1 vs. uniprot
Match: A0A2V3IE60 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE60_9FLOR)

HSP 1 Score: 163 bits (412), Expect = 1.620e-47
Identity = 81/135 (60.00%), Postives = 98/135 (72.59%), Query Frame = 0
Query:    5 VLNAVVVFSALATFSIAASLDLEDEAERFPERCDVPSDVAYCMDVMRVGTMFNDHTAEQFVRLETQLSEHALEECSWESFEGKRSPEECISTLSRFAEDNTALVDTPNDLDVSEHAL--DKICYKVCKAAKCFKC 137
            +LN +VV  AL   S+ +SL L D  ER  E C++PSDVAYCMDVMRVGT FND +A+ F RLE  LSEHALEECSWESFEGK+SP+ECISTLSRF+E++   + +  DLD SEH +  +K CY  CK  K  KC
Sbjct:   61 ILNTLVVLCALFYISVGSSLTLHDTEERMSEPCNIPSDVAYCMDVMRVGTRFNDESAQHFARLEDLLSEHALEECSWESFEGKKSPDECISTLSRFSENSVPPISSSTDLDFSEHIVRVNKACYNACKIVKGLKC 195          
BLAST of Ggra1011.t1 vs. uniprot
Match: F2Z7J1 (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J1_9FLOR)

HSP 1 Score: 63.9 bits (154), Expect = 1.610e-9
Identity = 39/123 (31.71%), Postives = 68/123 (55.28%), Query Frame = 0
Query:    1 MKLKVLNAVVVFSALATFSIAASLDLE--DEAERFPERCDVPSDVAYCMDVMRVGTMFNDHTAEQFVRLETQLSEHALEECSWESFEGKRSPEECISTLSRFA---EDNTALVDTPNDLDVSE 118
            MKL +L +   FSA     IA++ ++   DE E   E+CDVP  VAYC+D++ +G+  N ++++    L+  + E  +  C+W  + GK S ++C+  L  +A   E+   L D  ND + ++
Sbjct:    1 MKLLILCS---FSAFIVVFIASAANVREVDEIEIINEQCDVPPVVAYCLDMVHLGSNINKNSSQSNGELQHDVEEIPVGMCAWGDWAGKVSAKQCVQILKEYAAAEEEEKRLRDRQNDTETTK 120          
BLAST of Ggra1011.t1 vs. uniprot
Match: A0A2V3IIV8 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIV8_9FLOR)

HSP 1 Score: 60.1 bits (144), Expect = 4.290e-8
Identity = 33/92 (35.87%), Postives = 53/92 (57.61%), Query Frame = 0
Query:   12 FSA-LATFSIAASLDLE-DEAERFPERCDVPSDVAYCMDVMRVGTMFNDHTAEQFVRLETQLSEHALEECSWESFEGKRSPEECISTLSRFA 101
            FSA L  FS +A+   E DE +   E CDVP  VAYC+D++ +G+ F  +++++   L+  + E  +  C+W  + GK S  EC+  L  +A
Sbjct:    9 FSAFLIVFSASAARVHEIDETDIINEECDVPPVVAYCLDMIHLGSNFKTYSSQRSGELQQDVDEVPVGMCAWGDWAGKLSANECVVVLKEYA 100          
BLAST of Ggra1011.t1 vs. uniprot
Match: A0A2V3II71 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II71_9FLOR)

HSP 1 Score: 59.7 bits (143), Expect = 7.200e-8
Identity = 28/95 (29.47%), Postives = 50/95 (52.63%), Query Frame = 0
Query:   28 DEAERFPERCDVPSDVAYCMDVMRVGTMFNDHTAEQFVRLETQLSEHALEECSWESFEGKRSPEECISTLSRFAEDNTALVDTP---NDLDVSEH 119
            DE       CDVP  VAYC+D+M +G+ +N   +++   L+  + E  +  C+W  + GK S +EC+  L+ + +++    D P   N+ +   H
Sbjct:   27 DEKALIEAECDVPPAVAYCLDMMHLGSNYNSDGSQESAELQHDVDEVPIGMCAWGDWVGKLSADECMQVLAEYEDEDDEDDDVPETGNEAETEVH 121          
BLAST of Ggra1011.t1 vs. uniprot
Match: A0A2V3II08 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II08_9FLOR)

HSP 1 Score: 58.9 bits (141), Expect = 1.890e-7
Identity = 33/110 (30.00%), Postives = 55/110 (50.00%), Query Frame = 0
Query:   14 ALATFSIAAS-LDLEDEAERFPERCDVPSDVAYCMDVMRVGTMFNDHTAEQFVRLETQLSEHALEECSWESFEGKRSPEECISTLSRF---AEDNTALVDTPNDLDVSEH 119
            AL  FS + S +   DE       CDVP  VAYC+D++ +G+ +N   +     L+  + E  +  C+W  + GK S +EC+  L+ +   A+D   + +T +D     H
Sbjct:   12 ALCIFSASVSAVPQPDEKALIDAECDVPPVVAYCLDMIHLGSNYNSDGSHDSEELKLDVDEVPIGMCAWGDWVGKLSADECMQVLAEYEDEADDEEDVPETESDAQTEVH 121          
The following BLAST results are available for this feature:
BLAST of Ggra1011.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IGF52.230e-4860.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IE601.620e-4760.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
F2Z7J11.610e-931.71Uncharacterized protein n=1 Tax=Gracilariopsis and... [more]
A0A2V3IIV84.290e-835.87Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3II717.200e-829.47Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3II081.890e-730.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..165
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:452425..452922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1011.t1Ggra1011.t1Gracilaria gracilis GNS1m malemRNAtig00000027_pilon 452425..452922 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1011.t1 ID=Ggra1011.t1|Name=Ggra1011.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=166bp
MKLKVLNAVVVFSALATFSIAASLDLEDEAERFPERCDVPSDVAYCMDVM
RVGTMFNDHTAEQFVRLETQLSEHALEECSWESFEGKRSPEECISTLSRF
AEDNTALVDTPNDLDVSEHALDKICYKVCKAAKCFKCKFKLRKKKRKKCK
KKCKKKCRKKCDKYF*
back to top