Ggra1041.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1041.t1
Unique NameGgra1041.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length274
Homology
The following BLAST results are available for this feature:
BLAST of Ggra1041.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 96..111
score: 39.84
coord: 150..168
score: 45.39
coord: 16..27
score: 57.29
coord: 123..133
score: 39.77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 224..245
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 246..250
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 251..271
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..223
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 272..273
NoneNo IPR availableTMHMMTMhelixcoord: 250..272
NoneNo IPR availableTMHMMTMhelixcoord: 224..246
NoneNo IPR availableTMHMMTMhelixcoord: 79..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:882503..883840 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1041.t1Ggra1041.t1Gracilaria gracilis GNS1m malemRNAtig00000027_pilon 882503..883840 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1041.t1 ID=Ggra1041.t1|Name=Ggra1041.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=274bp
MGGGSPNAVFGGDGGDGGMGGSDGDGGDGGAGGEGLLIGGAGGMGGMGGM
NGDGGDGGDAGLESVGGDGGAGGDGSFNMTGGAGGMGGMGGGGAFGLGGM
GGMGGSGGAMAEGGPGGFGGTPEGDGGMGGMGGTGADGGAGGSGGPDGGM
GGTGGTGGVGGDGGPGGFGGVSILEDGGTGGTGGMGGARGAGGPGGPGGD
SLFADGGAGGEGAAAAAVRAAMSAAASVLAAAVLAATVLVAPVLVAPVLV
APVLVARVLVAVAAALVRVFVGQ*
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