Ggra1041.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra1041.t1
Unique NameGgra1041.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length274
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:882503..883840 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1041Ggra1041Gracilaria gracilis GNS1m malegenetig00000027_pilon 882503..883840 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1041.t1Ggra1041.t1Gracilaria gracilis GNS1m malepolypeptidetig00000027_pilon 882503..883840 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1041.t1.stop1Ggra1041.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000027_pilon 882503..882505 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1041.t1.CDS1Ggra1041.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000027_pilon 882503..882687 -
Ggra1041.t1.CDS2Ggra1041.t1.CDS2Gracilaria gracilis GNS1m maleCDStig00000027_pilon 883204..883840 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1041.t1.exon1Ggra1041.t1.exon1Gracilaria gracilis GNS1m maleexontig00000027_pilon 882503..882687 -
Ggra1041.t1.exon2Ggra1041.t1.exon2Gracilaria gracilis GNS1m maleexontig00000027_pilon 883204..883840 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1041.t1.intron1Ggra1041.t1.intron1Gracilaria gracilis GNS1m maleintrontig00000027_pilon 882688..883203 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra1041.t1.start1Ggra1041.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000027_pilon 883838..883840 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra1041.t1 ID=Ggra1041.t1|Name=Ggra1041.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=274bp
MGGGSPNAVFGGDGGDGGMGGSDGDGGDGGAGGEGLLIGGAGGMGGMGGM
NGDGGDGGDAGLESVGGDGGAGGDGSFNMTGGAGGMGGMGGGGAFGLGGM
GGMGGSGGAMAEGGPGGFGGTPEGDGGMGGMGGTGADGGAGGSGGPDGGM
GGTGGTGGVGGDGGPGGFGGVSILEDGGTGGTGGMGGARGAGGPGGPGGD
SLFADGGAGGEGAAAAAVRAAMSAAASVLAAAVLAATVLVAPVLVAPVLV
APVLVARVLVAVAAALVRVFVGQ*
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spliced messenger RNA

>Ggra1041.t1 ID=Ggra1041.t1|Name=Ggra1041.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=822bp|location=Sequence derived from alignment at tig00000027_pilon:882503..883840- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCGGTGGTAGCCCGAACGCAGTGTTCGGTGGGGATGGCGGTGACGG
CGGCATGGGTGGCTCCGACGGCGATGGAGGCGATGGCGGCGCCGGCGGCG
AGGGGCTGCTGATCGGCGGCGCCGGCGGTATGGGCGGCATGGGCGGTATG
AATGGCGACGGAGGCGACGGCGGTGACGCTGGCCTCGAGAGCGTTGGTGG
CGACGGCGGCGCCGGCGGCGACGGCTCGTTCAACATGACGGGTGGCGCCG
GCGGCATGGGCGGCATGGGCGGCGGCGGCGCGTTCGGCCTCGGCGGCATG
GGTGGCATGGGCGGAAGCGGCGGCGCCATGGCCGAGGGTGGCCCGGGGGG
GTTTGGTGGCACGCCCGAGGGCGATGGCGGTATGGGCGGGATGGGTGGTA
CTGGAGCGGACGGCGGCGCCGGCGGCTCCGGCGGTCCTGACGGCGGCATG
GGCGGCACAGGCGGCACTGGCGGCGTCGGCGGTGACGGCGGCCCCGGCGG
CTTTGGCGGCGTGTCCATCCTGGAGGACGGCGGCACCGGCGGCACTGGCG
GCATGGGCGGTGCCCGCGGCGCCGGCGGCCCGGGCGGACCGGGCGGCGAC
TCGCTGTTCGCGGACGGCGGCGCCGGCGGAGAAGGCGCCGCTGCAGCAGC
TGTCAGAGCGGCTATGTCTGCTGCAGCGTCTGTGCTCGCGGCGGCTGTGC
TCGCTGCGACGGTGCTCGTGGCGCCGGTGCTCGTGGCGCCGGTGCTCGTG
GCGCCGGTGCTCGTGGCGAGGGTGCTCGTGGCGGTGGCGGCGGCGCTCGT
GCGCGTCTTCGTCGGACAATGA
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protein sequence of Ggra1041.t1

>Ggra1041.t1 ID=Ggra1041.t1|Name=Ggra1041.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=274bp
MGGGSPNAVFGGDGGDGGMGGSDGDGGDGGAGGEGLLIGGAGGMGGMGGM
NGDGGDGGDAGLESVGGDGGAGGDGSFNMTGGAGGMGGMGGGGAFGLGGM
GGMGGSGGAMAEGGPGGFGGTPEGDGGMGGMGGTGADGGAGGSGGPDGGM
GGTGGTGGVGGDGGPGGFGGVSILEDGGTGGTGGMGGARGAGGPGGPGGD
SLFADGGAGGEGAAAAAVRAAMSAAASVLAAAVLAATVLVAPVLVAPVLV
APVLVARVLVAVAAALVRVFVGQ*
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mRNA from alignment at tig00000027_pilon:882503..883840-

Legend: polypeptideCDSexonstart_codonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra1041.t1 ID=Ggra1041.t1|Name=Ggra1041.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1338bp|location=Sequence derived from alignment at tig00000027_pilon:882503..883840- (Gracilaria gracilis GNS1m male)
ATGGGCGGTGGTAGCCCGAACGCAGTGTTCGGTGGGGATGGCGGTGACGG
CGGCATGGGTGGCTCCGACGGCGATGGAGGCGATGGCGGCGCCGGCGGCG
AGGGGCTGCTGATCGGCGGCGCCGGCGGTATGGGCGGCATGGGCGGTATG
AATGGCGACGGAGGCGACGGCGGTGACGCTGGCCTCGAGAGCGTTGGTGG
CGACGGCGGCGCCGGCGGCGACGGCTCGTTCAACATGACGGGTGGCGCCG
GCGGCATGGGCGGCATGGGCGGCGGCGGCGCGTTCGGCCTCGGCGGCATG
GGTGGCATGGGCGGAAGCGGCGGCGCCATGGCCGAGGGTGGCCCGGGGGG
GTTTGGTGGCACGCCCGAGGGCGATGGCGGTATGGGCGGGATGGGTGGTA
CTGGAGCGGACGGCGGCGCCGGCGGCTCCGGCGGTCCTGACGGCGGCATG
GGCGGCACAGGCGGCACTGGCGGCGTCGGCGGTGACGGCGGCCCCGGCGG
CTTTGGCGGCGTGTCCATCCTGGAGGACGGCGGCACCGGCGGCACTGGCG
GCATGGGCGGTGCCCGCGGCGCCGGCGGCCCGGGCGGACCGGGCGGCGAC
TCGCTGTTCGCGGACGGCGGCGCCGGCGGAGAAGGCGGTGAGGGCGGCTT
CAACGGCGACGGCGGCATGGGCGGACCGGGCGGCGCTGGCAGCGGCATGG
GCGGCGCCGGCGGCGCCGGCGGCGACGGCGGCACCGGCGGTGATGGAGGC
CCCGGTGGCGAGGGCGGGCCCGCCGACATCGGCGGCGACGGCGGCATGGG
CGGCGACGGCGGCGACGGCAACGGCTCGCTGAGCGGCGGCGACGGCGGCG
ACGGCGGCGACGGCGGCTTCGGCGTCGTGCTGTTCGGGCTGGGCGGCGAC
GGCGGTGACGGCGGCAACGAGCTCGGCGGCTAACGGGCGCGCGCGCGCAT
CGGCGCCGAGGCGGCGCGCCGCGCTGTCGCGCGCTGCGCAGCGCGCGGCA
TTGCGCGACTGCCGCCACTCGCAAACGAGCAGCGGGTCTGGCCACGGCTG
CACTAAAAAGTTAAACACAAAACGTTTTTTTATTGTTTTTTTTGTTTTTT
TTTGTTTTTTTGCTCTTCGACTTGCGCCGCTTCACGCGCACTTGCGGCGG
CAGCCGCTGCAGCAGCTGTCAGAGCGGCTATGTCTGCTGCAGCGTCTGTG
CTCGCGGCGGCTGTGCTCGCTGCGACGGTGCTCGTGGCGCCGGTGCTCGT
GGCGCCGGTGCTCGTGGCGCCGGTGCTCGTGGCGAGGGTGCTCGTGGCGG
TGGCGGCGGCGCTCGTGCGCGTCTTCGTCGGACAATGA
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Coding sequence (CDS) from alignment at tig00000027_pilon:882503..883840-

>Ggra1041.t1 ID=Ggra1041.t1|Name=Ggra1041.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=822bp|location=Sequence derived from alignment at tig00000027_pilon:882503..883840- (Gracilaria gracilis GNS1m male)
ATGGGCGGTGGTAGCCCGAACGCAGTGTTCGGTGGGGATGGCGGTGACGG
CGGCATGGGTGGCTCCGACGGCGATGGAGGCGATGGCGGCGCCGGCGGCG
AGGGGCTGCTGATCGGCGGCGCCGGCGGTATGGGCGGCATGGGCGGTATG
AATGGCGACGGAGGCGACGGCGGTGACGCTGGCCTCGAGAGCGTTGGTGG
CGACGGCGGCGCCGGCGGCGACGGCTCGTTCAACATGACGGGTGGCGCCG
GCGGCATGGGCGGCATGGGCGGCGGCGGCGCGTTCGGCCTCGGCGGCATG
GGTGGCATGGGCGGAAGCGGCGGCGCCATGGCCGAGGGTGGCCCGGGGGG
GTTTGGTGGCACGCCCGAGGGCGATGGCGGTATGGGCGGGATGGGTGGTA
CTGGAGCGGACGGCGGCGCCGGCGGCTCCGGCGGTCCTGACGGCGGCATG
GGCGGCACAGGCGGCACTGGCGGCGTCGGCGGTGACGGCGGCCCCGGCGG
CTTTGGCGGCGTGTCCATCCTGGAGGACGGCGGCACCGGCGGCACTGGCG
GCATGGGCGGTGCCCGCGGCGCCGGCGGCCCGGGCGGACCGGGCGGCGAC
TCGCTGTTCGCGGACGGCGGCGCCGGCGGAGAAGGCGCCGCTGCAGCAGC
TGTCAGAGCGGCTATGTCTGCTGCAGCGTCTGTGCTCGCGGCGGCTGTGC
TCGCTGCGACGGTGCTCGTGGCGCCGGTGCTCGTGGCGCCGGTGCTCGTG
GCGCCGGTGCTCGTGGCGAGGGTGCTCGTGGCGGTGGCGGCGGCGCTCGT
GCGCGTCTTCGTCGGACAATGA
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