Ggra7241.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7241.t1
Unique NameGgra7241.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length478
Homology
BLAST of Ggra7241.t1 vs. uniprot
Match: A0A2V3J167 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J167_9FLOR)

HSP 1 Score: 630 bits (1624), Expect = 1.080e-222
Identity = 310/480 (64.58%), Postives = 399/480 (83.12%), Query Frame = 0
Query:    1 MEPALNSQFYQIGYAGKDAVKECFENRDYEIEKVIEFIMEFKNLRGLQIGTT--PLTLLKKGGFVPSRTLTEVLKIVIDKMKRDISTLSHDKLDCLLEKSFTYLTVPHLAEIPIATLERINVVDPHIWKQIVDNGLNDSPYTDLPLSIKKRIWSFEPKALDHEVDVLIDSLPDTANPENLDD--MNRDRHRMRSTNAKLNELLRMLEGMGENEVMQVMEKMVERASVEQVPSKLDTIANFYHDLVLRLPTASVSGPNLMTVRKMGKFLDTKAGHDIALDTHLLKEIREAMSAEHPNGAVILLVGSTYSRDFLADQLIYGLISRRGPINDFTDENILKSAASHLRADPHVEDLTFLNLCNMKTGTLLSGSGSVSEAEFEEPFQLFFQLIMDEIHMEITHFHDKFYSSNIGLPNSRLVEAVQKGRLQRRVLTSYCLQQLIHGNFIALSRYRLLLEDVLRAADNTTEPREVTLARELIFKIID 476
            ME +L+ + YQIGYAG+DA+KE FENRDY++E+V +FI++F+ LR LQ  +   PL LLK GGF  SR L +VLK++IDK+KRDI+TLSH+KL+ LLEKSFTYLTVP LA IPIA LE +NVVDP IWKQIVDNGL+++PY DLPLSIKKRIWSFEPKALDHE++ L+D LP+    E++++  + +DRH++RS N  L +LLRMLEGMGENEV+QV+EKM+ERASVEQ  SK  +IANFYHDL+LRLP+  VSGPN++++RKM +FL +   +++ +D+HLLK IRE++  E P+ +V LL+GSTY+RDFLA+QL++ LI RRGPIND+ D  IL+SA SHL+ADPH+EDLT+LNLCNMK+  ++SGS  V+EAE +EPFQLFFQL+MDEIH +I   HD +YS+N+GLPN +LV+AVQKG+LQRRV++SYCLQQ IH N ++LSRYRL+LEDVLRAAD TTE REV LA +LI +II+
Sbjct:    1 MEQSLDPELYQIGYAGQDAIKESFENRDYDLERVKQFIIDFRTLRRLQFDSVRAPLELLKMGGFSESRVLRDVLKVMIDKVKRDINTLSHEKLESLLEKSFTYLTVPQLAPIPIAVLEHMNVVDPSIWKQIVDNGLSEAPYIDLPLSIKKRIWSFEPKALDHEIEALLDRLPEAPPSESIEEFVVKQDRHKLRSANQMLGDLLRMLEGMGENEVLQVIEKMIERASVEQTASKHISIANFYHDLLLRLPSVVVSGPNMISLRKMARFLASVPSYELDIDSHLLKSIRESLLRETPSSSVALLLGSTYTRDFLAEQLVFSLIHRRGPINDWNDTTILESATSHLKADPHIEDLTYLNLCNMKSAGIVSGSDRVAEAEVDEPFQLFFQLMMDEIHADIVAHHDSYYSANVGLPNVQLVDAVQKGKLQRRVMSSYCLQQFIHRNMVSLSRYRLILEDVLRAADQTTELREVALAHQLILRIIN 480          
BLAST of Ggra7241.t1 vs. uniprot
Match: R7QN54 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN54_CHOCR)

HSP 1 Score: 358 bits (920), Expect = 5.060e-116
Identity = 204/472 (43.22%), Postives = 292/472 (61.86%), Query Frame = 0
Query:   12 IGYAGKDAVKECFENRDYEIEKVIEFIMEFKNLRGLQIGTTP--LTLLKKGGFVPSRTLTEVLKIVIDKMKRDISTLSHDKLDCLLEKSFTYLTVPHLAEIPIATLERINVVDPHIWKQIVDNGLNDSPYTDLPLSIKKRIWSFEPKALDHEVDVLIDSLPDTANPENLDD--MNRDRHRMRSTNAKLNELLRMLEGMGENE--VMQVMEKMVERASVEQVPSKLDTIANFYHDLVLRL-PTASVSGPNLMTVRKMGKFLDTKAGHDIALDTHLLKEIREAMSAEHPNGAVILLVGSTYSRDFLADQLIYGLISRRGPINDFTDENILKSAASHLRADPHVEDLTFLNLCNMKTGTLLSGSGSVSEAEFEEPFQLFFQLIMDEIHMEITHFHDKFYSSNIGLPNSRLVEAVQKGRLQRRVLTSYCLQQLIHGNFIALSRYRLLLEDVLRAADNTTEPREVTLARELIFKIID 476
            IGYAGKD +K  FE    +   V +F+ +F+ +  L   T    L LLK GG   +R   EV   ++D MKR I+TL  + L  LL+KS+++LTVP L+ I I+ LER++ VD  IW QIV NGL++SPYTDLP SIKKRIW  E  A DHE+D ++D + +   P  ++   +  DR + RS +  L +L+R+   +   E  V ++++K V++A+  Q  SK   IAN YHD +  + P  +   P+L ++RKM KFLDT  G D  +D+ +L  IR+ +  E     V LLV S+YSRDFLA QL+  L++RRG + +  D+ IL  AA HLRADP + DLTFL LCNMK   L+S   + +E E   PFQ+FF L++ E+ ++   F D+FY+ N  LP+ + ++ VQ G+L+RRV+TSYCLQ   HGNF+ LSR+RL+L+      D   E RE  +A  L+ + I+
Sbjct:   12 IGYAGKDELKAAFEEVLPDKVGVKKFVKDFREVHSLNGRTISPVLPLLKLGGISSNRMANEVKNALVDIMKRQIATLEQEALQALLDKSYSFLTVPELSPIGISVLERLHYVDRRIWAQIVQNGLDESPYTDLPTSIKKRIWPHEVSAFDHEIDKVLDCITELTTPPGIEAFFVTPDRKKARSEDPILTDLMRLSNAVASEEGMVARIVDKFVQKATAAQTGSKRIAIANVYHDFLTTVNPRVN---PSLTSLRKMAKFLDTPNGED-DIDSDVLGFIRKNIGVEASCATVGLLVASSYSRDFLAFQLVLRLLNRRGSLGEGRDQTILDCAAEHLRADPWIPDLTFLTLCNMKAAALISEHKAPTETEANMPFQMFFPLLIHEMELDDQRFSDQFYAMNAALPDPKFLQIVQAGKLERRVVTSYCLQLFGHGNFVGLSRFRLILDVAFHQMDREEEVRETMIAVNLLQRTIE 479          
The following BLAST results are available for this feature:
BLAST of Ggra7241.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1671.080e-22264.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QN545.060e-11643.22Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 178..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:374463..375896 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7241.t1Ggra7241.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 374463..375896 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7241.t1 ID=Ggra7241.t1|Name=Ggra7241.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=478bp
MEPALNSQFYQIGYAGKDAVKECFENRDYEIEKVIEFIMEFKNLRGLQIG
TTPLTLLKKGGFVPSRTLTEVLKIVIDKMKRDISTLSHDKLDCLLEKSFT
YLTVPHLAEIPIATLERINVVDPHIWKQIVDNGLNDSPYTDLPLSIKKRI
WSFEPKALDHEVDVLIDSLPDTANPENLDDMNRDRHRMRSTNAKLNELLR
MLEGMGENEVMQVMEKMVERASVEQVPSKLDTIANFYHDLVLRLPTASVS
GPNLMTVRKMGKFLDTKAGHDIALDTHLLKEIREAMSAEHPNGAVILLVG
STYSRDFLADQLIYGLISRRGPINDFTDENILKSAASHLRADPHVEDLTF
LNLCNMKTGTLLSGSGSVSEAEFEEPFQLFFQLIMDEIHMEITHFHDKFY
SSNIGLPNSRLVEAVQKGRLQRRVLTSYCLQQLIHGNFIALSRYRLLLED
VLRAADNTTEPREVTLARELIFKIIDP*
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