Ggra7193.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7193.t1
Unique NameGgra7193.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length141
Homology
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BLAST of Ggra7193.t1 vs. uniprot
Match: A0A2V3ILU7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILU7_9FLOR)

HSP 1 Score: 120 bits (302), Expect = 1.760e-32
Identity = 95/140 (67.86%), Postives = 104/140 (74.29%), Query Frame = 0 
Query:    1 MSEGALSRLLPFSGIXXXXXXXXXXXGVVGCGIGGKGIKGVNIPGFXXXXXXXXXXXXXXXLFLLGIGTPVYSTTKLLGIEDRKMDKRAVEIDGDLAAGKRPYGALPESLSTKDELMDRFIRSLIIKREKMRRNRGQFMQ 140
            MS G  SRLLPFSGI XXXXXXXXXX        GK IK   IP FXXXXXXXXXXXXXXX FL G+GTPV  +TKL GIEDR MDK+A EID D   GKRPYGALPE +ST DELMD+ +RSLII R KM+R RG  ++
Sbjct:    1 MSTGPRSRLLPFSGIGXXXXXXXXXXXXXXXXXXGKEIKAAKIPSFXXXXXXXXXXXXXXXXFLFGMGTPVRRSTKLFGIEDRIMDKKAKEIDQDREEGKRPYGALPEEMSTGDELMDKIVRSLIINRAKMQRGRGVLVE 140
The following BLAST results are available for this feature:
BLAST of Ggra7193.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILU71.760e-3267.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..140
NoneNo IPR availableTMHMMTMhelixcoord: 9..31
NoneNo IPR availableTMHMMTMhelixcoord: 46..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:166669..168001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7193.t1Ggra7193.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 166669..168001 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7193.t1 ID=Ggra7193.t1|Name=Ggra7193.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=141bp
MSEGALSRLLPFSGIGIGFGFGFGCGGVVGCGIGGKGIKGVNIPGFGWGV
GCGVGFGFGWGLFLLGIGTPVYSTTKLLGIEDRKMDKRAVEIDGDLAAGK
RPYGALPESLSTKDELMDRFIRSLIIKREKMRRNRGQFMQ*
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