Ggra7245.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7245.t1
Unique NameGgra7245.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length919
Homology
BLAST of Ggra7245.t1 vs. uniprot
Match: A0A2V3J239 (PAB-dependent poly(A)-specific ribonuclease subunit PAN2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J239_9FLOR)

HSP 1 Score: 1243 bits (3215), Expect = 0.000e+0
Identity = 689/1236 (55.74%), Postives = 784/1236 (63.43%), Query Frame = 0
Query:    1 MNSQFVPPR-SPPADEAQAPPVYSEADQYYYDAAAEHM-PPHGWYEHSCTQVGHPNSHADPIRALACDPVKELIWAATASGMLHAHHAPDMARIVSTYVGEPSSDPSNHGDVRDIVVSSTSVLAAVSYGLAVVKRGGVLVASIRADTIRNAKALALNPVSDDHVCVGGESRMLAVVDVQQQRILRQATLRGATGVTAAVWTAPQAASSLAVFSTSTGRISLCDPSSMREVNAIAAFAGATTSIATSGYYLAATGLGTRGGVPYLEQTVKLYDIRAVQNPLPSVLFSAPPMFIAFDHATSQIYNTDGALWMLSPHGVMQLLDISTVTNREPAYPLCDEIHLDAGSDVFTAMVVSSQGLLVLGDSGGFVHQWSSSESVKVNSSSEPVWTTPVNPEPPTPSIHMDDFINLDIGGTIPKCAMPEFECEYLTEELFTSVSNQPQRRKRGEL----IAE----------------------------------------------------------------------------------------------RSKYVEMDLVAWESIEGFDFLKYNTSPRFCGLENALPNV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NASHNLDGIAVKAMQEAKKIVQSMRVELTDGISVTEIDSLASCGKSSLGYDAIEGSFSDTGNLIAEYDLSFVVALVPPTSQDLEAMSVNDGSSTRNVAGHLVAYIHVPSVYSETGNNRGEKSEQSKLDAKHVDAEWWCFNDFVIAPCEGFDEVAAFHKFWKKPCVIAYVRRDINNRVKMEIDDTAVDVREVIGEEPHNAAIGLQPDEEVPGKGTVLALDCEFVMVSRDEADIFGDGTRQIVVPARMALARVSVIRGYGRLKGVALIDDYVAVREPVLDYLTRFSGLSEGDLDATRSPHKVSSLKSVYKRLRCLVDAGCIFVGHGLKSDFRIINFVVPLDQVIDTVTLFRVKNKRLLGLRFLSNALLGGDIQSATHDSIEDSDAALRLYDVYLTLKEGEDGDDRFERTLKELYAYGYAHGWKADPDDPFVIPQ 918
            MN QFVP      AD+A  P VY++ + +YY   A+ +  P GWYE SCTQ G    HADPIRALACDP KELIWA TASGMLHAH+A DM+RIVS+Y+GEPS+  +N GDVRDIVVS++SVLAAVSYGL +V RGGVL  ++RA+ I NAKALALNP+SD HVC+GGESRMLAV+D++Q+RILRQATLRGATGVTAA+W AP+AASS+A+FSTSTGRISLCDPS+MREVNAIAAFAGATTS+ATSGYYLAATGL TRGGVPYLEQ+VKLYDIRAVQ PLPSVLFSAPPMFIAFD ATS +YNTDGALWMLSPHGVMQLLDIS VT   PAYPLCDEI LDAGSDVFTAMVVS QGLL LGDSGGFVHQW+SS+SVKVN+SSEPVWTTPVNPEP TPSIHMD+FI  +IG TIPKCA+PEFE EYLT+ELF S    P +RK G+L    IA+                                                                                              RS YVEMDLVAWES EGFDFLKYN S RFCGLENALPNV                                                                                                                                                                                                                          + +  L+ IA +AMQ  KK+V+SMR++LT+G+SVT++    +  ++ LGYDA      DT +L+AEYDLSFV+A VP   Q+    + N G + +NV GHLVAYI VP  Y E G +R +K+    +  ++ DAEWWCFNDFVI+PCEGF+EVAAFH+ WK+PCVI YVRRDIN+RV+ME ++T  DVREVIGEE  NAA+GLQPDEEVP KGTVLALDCEFVMV+RDEADIFGDGT Q+VVPAR ALARVSVIRGYG+LKG ALIDDYVAVREPV+DYLTRFSGLSEGDLDA+RSPHKVSSLKSVYKRLRCLVDAGCIFVGHGLKSDFRIINFVVP +QVIDTVTLFR KNKRLLGLRFLSN LLGGDIQS THDSIED+DAALRLYD+Y+ LK+GE G+ R +RT+KELYAYGYAHGWKAD D+ FV P+
Sbjct:    1 MNHQFVPSSVGGSADDAHLPSVYTQHEPFYYGQHADVLNQPAGWYEVSCTQAGAATPHADPIRALACDPRKELIWAGTASGMLHAHYAADMSRIVSSYIGEPSASHTNLGDVRDIVVSNSSVLAAVSYGLVIVNRGGVLCGAVRAEAISNAKALALNPLSDKHVCIGGESRMLAVIDLEQERILRQATLRGATGVTAALWAAPEAASSIAIFSTSTGRISLCDPSTMREVNAIAAFAGATTSMATSGYYLAATGLSTRGGVPYLEQSVKLYDIRAVQAPLPSVLFSAPPMFIAFDSATSSMYNTDGALWMLSPHGVMQLLDISPVTTGAPAYPLCDEIQLDAGSDVFTAMVVSPQGLLFLGDSGGFVHQWTSSDSVKVNASSEPVWTTPVNPEPSTPSIHMDNFITSEIGATIPKCALPEFEYEYLTDELFDSTEKPPFKRKPGKLRSARIAKAVNTDCDLYPRFPFARFPLQITDDILQVAKRHSFVSYAQAPPSFIRNSESGHRKPPKTKAVNTKSRLQRERRSSSPSGGSAVTSAGPDLTKSSVRSMYVEMDLVAWESFEGFDFLKYNASARFCGLENALPNVYVNPAVQALYFCPPVRTAIGNHACDRDWCISCELGFLFHMFDLGGAGMACEAGNFTRAFMTMANAGALGLLDGPHALPLSQRIENFTRYLLEQLHKDEGMETDSTVLSVFGAETVSYGTFMTSKTNWERKARPFQHTLTYNRPMTGTFCELLEHSLYHRADTTRAFCEASGQFESMTQHRELRNLPNVLLLGCNSKATGYDEWWFETGGNRNPVQSPRDQTRALEDIANEAMQGEKKLVESMRIDLTNGLSVTKLSDEGTEARADLGYDADGRDAKDTADLMAEYDLSFVIAQVPQAIQEGAEANGNGGMNAKNVEGHLVAYIRVPRSYRERGGSREDKTNSKAVSERNSDAEWWCFNDFVISPCEGFNEVAAFHRMWKRPCVIGYVRRDINSRVEMESNNTLADVREVIGEENCNAAVGLQPDEEVPEKGTVLALDCEFVMVARDEADIFGDGTWQVVVPARKALARVSVIRGYGKLKGTALIDDYVAVREPVVDYLTRFSGLSEGDLDASRSPHKVSSLKSVYKRLRCLVDAGCIFVGHGLKSDFRIINFVVPPNQVIDTVTLFRAKNKRLLGLRFLSNTLLGGDIQSKTHDSIEDADAALRLYDLYVKLKKGEGGEQRLQRTIKELYAYGYAHGWKADADEAFVFPE 1236          
BLAST of Ggra7245.t1 vs. uniprot
Match: R7QR64 (USP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR64_CHOCR)

HSP 1 Score: 977 bits (2525), Expect = 0.000e+0
Identity = 577/1252 (46.09%), Postives = 713/1252 (56.95%), Query Frame = 0
Query:    1 MNSQFVPPRSPPADEAQAPPVYSEADQYYYDAAAE-HMPPHGWYEHSCTQVGH--PNSHADPIRALACDPVKELIWAATASGMLHAHHAPDMARIVSTYVGEPSSDPSNHGDVRDIVVSSTSVLAAVSYGLAVVKRGGVLVASIRADTIRNAKALALNPVSDDHVCVGGESRMLAVVDVQQQRILRQATLRGATGVTAAVWTAPQAASSLAVFSTSTGRISLCDPSSMREVNAIAAFAGATTSIATSGYYLAATGLGTRGGVPYLEQTVKLYDIRAVQNPLPSVLFSAPPMFIAFDHATSQIYNTDGALWMLSPHGVMQLLDISTVTNREPAYPLCDEIHLDAGSDVFTAMVVSSQGLLVLGDSGGFVHQWSSSESVKVNSSSEPVWTTPVNPEPPTPSIHMDDFINLDIGGTIPKCAMPEFECEYLTEELF-------------------------------------------------TSV----------------------------------------SNQPQRRKRGELIAE--------RSKYVEMDLVAWESIEGFDFLKYNTSPRFCGLENALPNV--NA----------------SHN-----------------------------------------------LDG----------------------------------------------------------------------------------------------------------------------------------------------------------IAVKAMQEAKK--------IVQSMRVELTDGISVTEIDS------LASCGKSSLGYDA--IEGSFSDTGNLIAEYDLSFVVALVPPTSQDLEAMSVNDGSS-TRNVAGHLVAYIHVPSVYSETGNNRGEKSEQSKLDAKHVDAEWWCFNDFVIAPCEGFDEVAAFHKFWKKPCVIAYVRRDINNRVKMEIDDTAVDVREVIGEEPHNAAIGLQPDEEVPGKGTVLALDCEFVMVSRDEADIFGDGTRQIVVPARMALARVSVIRGYGRLKGVALIDDYVAVREPVLDYLTRFSGLSEGDLDATRSPHKVSSLKSVYKRLRCLVDAGCIFVGHGLKSDFRIINFVVPLDQVIDTVTLFRVKNKRLLGLRFLSNALLGGDIQSATHDSIEDSDAALRLYDVYLTLKEGEDGDDRFERTLKELYAYGYAHGWKADPDDPFVI 916
            MN+ F     P   E   P  Y+    Y Y   A+ H    GWYE SC + G   P  + D IRALA DPVKELIWA TA GMLH+H A DM R+VS+YV EPS+DPS   DVRDIVVSS SVLAA+ YGLAV+ RGG  +A++RADTI+NA+ LALNP S+ HVC+GGESRMLA++D+QQ+RILRQATLRGATGVT A+W A  A SSLA+F+TSTGRIS CDP++MRE+NA+AAFAGATTSIA SGY+LAATG+GTRGGV Y EQ VK++DIR +  P+PSV + APPM++ FD  +S ++NT+GA+W+LSP G++Q +DIS++ N  PAYP+ + I LDAGSDVFT M VS  GLL +GD+GGF+H+W+S+++VKVN SSEP+W +P+  EPP+PS+ +D  +  DIG TIPKCA+PE+   YLT+ELF                                                 TSV                                        S  P   K  E++ +        RS YVEMDLVAWES EGFDFLKYN S  FCGLENALPNV  NA                SH                                                LDG                                                                                                                                                          + ++A+++A K        ++Q+M V++TDG+SV+E++        A+ G+   GYD   +E    + G+  AEYDLSFV+A VP    + EA   + G +  RN+ GHLV+YI VP  Y +      +K E+S+    ++ A+WWCFNDFVI+PC+GF EVAAF K WKKPC+I +VRRD+  RVK    +   +VREV+G E  NAA+GL+P EEVPG+GT+L LDCEFV+V RD A+IFGDGTR++VVP+RMALARVSVIRGYG LKG ALID+YVAVREPV+DY+TRFSG++EGDLD  RS +KV+SLKSVYK+LRCL+DAGCIFVGHGLKSDFRIINFVVP +QVIDTVTLFRV  KRLLGLRFLSN LLGGDIQS THDSIED+DAAL+LY VY+ LK    G D FE  LK LY YGY  GWK D +DPFVI
Sbjct:    1 MNNNFHGHSYPHGGEMN-PNTYNHNQDYQYVPNADPHQEVSGWYEVSCVEAGAGVPGRN-DAIRALAFDPVKELIWAGTAGGMLHSHFASDMTRVVSSYVAEPSADPSITDDVRDIVVSSHSVLAAMGYGLAVLTRGGAFLAAMRADTIKNARGLALNPHSESHVCIGGESRMLAIIDLQQERILRQATLRGATGVTKALWGASDATSSLAIFATSTGRISFCDPATMREINAVAAFAGATTSIALSGYFLAATGIGTRGGVSYFEQHVKIFDIRRLDTPMPSVAYQAPPMYVTFDAYSSHLHNTNGAMWILSPEGLLQCMDISSIANGTPAYPITEPIQLDAGSDVFTCMAVSPSGLLTIGDTGGFIHEWTSTDTVKVNDSSEPLWLSPITTEPPSPSLRLDAILTSDIGTTIPKCALPEYGHSYLTDELFGTQKRSDSPTQPSHHRIKPGLPESLYERHPYARFPLRVRDDISASAKRHTSVGYAQAPHSFVRNSEEGHKASPVVKGMYGKHRNKKYGKPMSSGTPSSSKGVEVVRKLDLSKPYFRSYYVEMDLVAWESFEGFDFLKYNKSALFCGLENALPNVYVNAAVQVLYFTPPLRRAIGSHTCERQWCISCELGFLFHMFDLGGAGMACEAGNFTRAFMTMANAGALGLLDGPHALPLSQRIENFSRYLLEQLHQDDHSHEGSMVSNLFGTETVSHGTFTPSKTNWERRSRPFQHTLTYENDESKQHASFCELLERSFSQDLDPTRAFCEATGQFETMTQRRDIRSLPNLLLIGCNSKAPQYERWWDLSDKADDVYIRSRPTASQQLGIEALEKASKAAMERPHKLIQAMLVDVTDGVSVSELEGDDESWRTATEGEPCFGYDKNEVEMGSLNKGDQSAEYDLSFVIAHVPQL--EFEAGGSDRGDTGRRNIGGHLVSYIRVPQEYRDR-----QKVEKSQSKDMNLGADWWCFNDFVISPCDGFGEVAAFDKRWKKPCLIGFVRRDVWQRVKACKLEHNANVREVLGTEDRNAAVGLRPGEEVPGRGTLLGLDCEFVIVGRDVAEIFGDGTRKVVVPSRMALARVSVIRGYGDLKGTALIDEYVAVREPVVDYVTRFSGIAEGDLDVGRSLYKVTSLKSVYKKLRCLLDAGCIFVGHGLKSDFRIINFVVPPEQVIDTVTLFRVSKKRLLGLRFLSNTLLGGDIQSVTHDSIEDADAALQLYGVYMKLKGQGGGPDVFEHNLKRLYTYGYLKGWKVDVEDPFVI 1243          
BLAST of Ggra7245.t1 vs. uniprot
Match: A0A5J4YMM7 (PAB-dependent poly(A)-specific ribonuclease subunit PAN2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMM7_PORPP)

HSP 1 Score: 312 bits (799), Expect = 9.730e-87
Identity = 187/412 (45.39%), Postives = 243/412 (58.98%), Query Frame = 0
Query:  510 MRVELTDGISVTEIDSLASCGKSSLGYDAIEGSFSDTGNLIAEYDLSFVVALVPPTSQDLEAMSVNDGSSTRNVAGHLVAYIHVPSVYSETGNNRGEKSEQSKLDAKHV---DAEWWCFNDFVIAPCEGFDEVAAFHKFWKKPCVIAYVRRDINNRVKMEIDDTAVD--VREVIGEEPHNAAIGLQPDE--EVPGKGTVLALDCEFVMVSRDEADIFGDGTRQIVVPARMALARVSVIRGYGRLKGVALIDDYVAVREPVLDYLTRFSGLSEGDLDATRSPHKVSSLKSVYKRLRCLVDAGCIFVGHGLKSDFRIINFVVPLDQVIDTVTLFRVKNKRLLGLRFLSNALLGGDIQSATHDSIEDSDAALRLYDVYLTLKEGEDGDDRFERTLKELYAYGYAHGWKADPDDPF 914
            ++VE T G+ V E+   +S          I  +  DTG  +AEYDL  V+A V                  ++   HLVAY+ V                    D+KH       WW  NDF IA C+  DEV  FH  WK PC++ Y RRD++ R+ ++  +  V+  +RE+      N A+ L   E  EV GKG ++ALDCEFVM+ R++ DI GD ++ +V PARMALARVSV+RG G   G   +DDY+A+ E  +D+LTRFSGL EGDL A  SP+K++ LK VY +L  L++AGCIFVGHGLK+DFRIINF VP DQVIDTV +F +  +R L LRFLS+ LL  DIQ ATHDSIEDSDAALRLY  YL+ +         E  +  LYAYG  + W A+P +PF
Sbjct:  869 IQVEATRGVEVEEMTRESS---------EIREAAEDTGLCVAEYDLCAVIARV------------------QSSVLHLVAYVDVQ-------------------DSKHTADRSPPWWVLNDFSIARCQSDDEVTRFHVQWKLPCILMYKRRDMHARLAIKRAEHVVEHELRELFTT-AGNRAVPLSEREIPEVIGKGLLVALDCEFVMMEREQVDIRGDLSKTVVRPARMALARVSVLRGQGSFAGTPFVDDYIAMSETPVDHLTRFSGLREGDLVAGSSPYKLTGLKRVYLKLLALLNAGCIFVGHGLKNDFRIINFHVPRDQVIDTVHVFHLPGRRYLSLRFLSSTLLESDIQGATHDSIEDSDAALRLY--YLSQQHSPR---HMESLMDALYAYGRRNQWSANPAEPF 1228          
BLAST of Ggra7245.t1 vs. uniprot
Match: A0A7M7J675 (Exonuclease domain-containing protein n=3 Tax=Varroa TaxID=62624 RepID=A0A7M7J675_VARDE)

HSP 1 Score: 258 bits (659), Expect = 1.510e-72
Identity = 147/357 (41.18%), Postives = 205/357 (57.42%), Query Frame = 0
Query:  565 TSQDLEAMSVNDGSSTRNVAGHLVAYIHVPS---VYSETGNNRGEKSEQSKLDAKHVDAEWWCFNDFVIAPCEGFDEVAAFHKFWKKPCVIAYVRRDINNRVK--MEIDDTAVDVREVIGEEPHNAAIGLQP-----DEEVPGKGTVLALDCEFVMVSRDEADIFGDGTRQIVVPARMALARVSVIRGYGRLKGVALIDDYVAVREPVLDYLTRFSGLSEGDLDATRSPHKVSSLKSVYKRLRCLVDAGCIFVGHGLKSDFRIINFVVPLDQVIDTVTLFRVKNKRLLGLRFLSNALLGGDIQSATHDSIEDSDAALRLYDVYLTLKEGEDGDDRFERTLKELYAYGYAHGWKADPD 911
            TS  +    +N+G         +V  IH  S   + S      G           H    W+ FNDF +   +   EV      WK+PC++ Y+R+DI ++ K    I     D+       P NA+  L+      D E    G ++A+D EFV ++++EA+I  DGTR  + P++ ++AR+S +RG G+++GVA IDDY+A +E V+DYLT+FSG+  GDLD T S   +S+LK+ Y++LR LVD G IFVGHGLK+DFR+IN VVP +QV DTV LF+++NKR+L LRFL+    G  IQS THDSIED+  ALRLY  YL L++     D     L ELY  G  + WK   D
Sbjct:  161 TSPTVRETEINNGDGINYELAAIVCVIHHDSRENIVSLINVGAGYHERHHSSGMSH----WYVFNDFTVHSIKE-SEVGHLPVDWKQPCMLYYIRKDIAHKYKDLKVISPLTEDLIRKDTSIPRNASARLKTFTPLLDSEQFSAGDIVAMDAEFVTLNQEEAEIRSDGTRATIRPSQRSVARISCLRGQGQMEGVAFIDDYIATQEQVVDYLTQFSGIQPGDLDVTVSSKHLSTLKATYQKLRLLVDKGVIFVGHGLKNDFRVINLVVPQEQVRDTVLLFQLRNKRMLSLRFLAWHFFGETIQSETHDSIEDAKTALRLYRKYLELEQR----DEINAALTELYEVGKKYNWKVPKD 508          
BLAST of Ggra7245.t1 vs. uniprot
Match: K1R055 (PAB-dependent poly(A)-specific ribonuclease subunit 2 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1R055_CRAGI)

HSP 1 Score: 251 bits (641), Expect = 2.040e-71
Identity = 139/350 (39.71%), Postives = 210/350 (60.00%), Query Frame = 0
Query:  563 PPTSQDLEAMSVNDGSSTRNVAGHLVAYIHVPSVYSETGNNRGEKSEQSKLDAKHVDAEWWCFNDFVIAPCEGFDEVAAFHKFWKKPCVIAYVRRDINNRVKMEIDD--TAVDVREVIG-EEPHNAAIGLQP--DEEVPGKGTVLALDCEFVMVSRDEADIFGDGTRQIVVPARMALARVSVIRGYGRLKGVALIDDYVAVREPVLDYLTRFSGLSEGDLDATRSPHKVSSLKSVYKRLRCLVDAGCIFVGHGLKSDFRIINFVVPLDQVIDTVTLFRVKNKRLLGLRFLSNALLGGDIQSATHDSIEDSDAALRLYDVYLTLKEGEDGDDRFERTLKELYAYGYAHGWK 907
            PPT +  E ++V         AG+LVA I+V     ET + R EK   +         +W+ FNDF I P E   E  A +  WK PC I + RR +     + + +  T   ++E  G   P N  +  +P  +EE+P +G V+ALD EFV ++++E+++  DGTR ++ P+ +  AR++ +RG G  KG A IDDY++ +E V+DYLT++SG+S GDL+   S   +++LKS Y +LR LVD   +FVGHGLK DFR+IN  VP DQ++DTV LF +  +R++ L++L+   L  +IQS+THDS+ED++ AL+LYD Y  +    +G D+    +KE+Y  G    WK
Sbjct:   50 PPTMKYYEVLAVVYNIKDEKTAGNLVACINV----GETYHQRKEKVTCT---------QWYLFNDFSILPIEK-HEACAVNLDWKVPCTIYFKRRHLTKFHDLTVTNPITVKVLKEDFGLVNPANRKVTFEPLTEEELPKEGDVVALDAEFVSLNQEESELRSDGTRSMIKPSHLTCARMTCLRGKGEKKGTAFIDDYISTQEQVVDYLTQWSGISPGDLNPELSTKNLTTLKSTYVKLRYLVDNKVVFVGHGLKKDFRVINITVPKDQIVDTVQLFYIPRQRMISLKYLAWYFLKTNIQSSTHDSVEDANTALQLYDKYQEI--AAEGSDKIRAAIKEMYEVGRKDQWK 383          
BLAST of Ggra7245.t1 vs. uniprot
Match: A0A1X6P745 (Exonuclease domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P745_PORUM)

HSP 1 Score: 261 bits (667), Expect = 2.230e-71
Identity = 136/235 (57.87%), Postives = 166/235 (70.64%), Query Frame = 0
Query:  684 NAAIGLQPDEEVPGKGTVLALDCEFVMVSRDEADIFGDGTRQIVVPARMALARVSVIRGYG---RLKGVALIDDYVAVREPVLDYLTRFSGLSEGDLDAT-RSPHKVSSLKSVYKRLRCLVDAGCIFVGHGLKSDFRIINFVVPLDQVIDTVTLFRVKNKRLLGLRFLSNALLGGDIQSATHDSIEDSDAALRLYDVYLTLK-EGEDGDDRFERTLKELYAYGYAHGWKADPDDP 913
            N A+     E +PG+G V+ALDCEFV ++R+E +I   G R +VVP R+ALARVSV+RG        G+  +DDY+AVREPV+DYLTRFSGL EGDLDAT RSP+ V+  K+VYK+LR LVD G +  GHGL  DFRI NFVVP  QV+DTV LFR+  KRLL LR+L+  LLG DIQ+ THDS+ED+  ALRLY V+  L   GE G       L+ LYAYGYAHGW  DP+ P
Sbjct:  525 NGAVPFADGEPLPGRGMVVALDCEFVSITREEVEISTTGARSVVVPERLALARVSVLRGDAWPADRVGLPFLDDYIAVREPVVDYLTRFSGLVEGDLDATGRSPYAVTHRKAVYKKLRALVDGGVVLAGHGLAKDFRIANFVVPPHQVVDTVALFRLAGKRLLSLRYLAACLLGADIQATTHDSVEDAVTALRLYRVWRALHARGEVGG-----VLRTLYAYGYAHGWVVDPERP 754          
BLAST of Ggra7245.t1 vs. uniprot
Match: A0A7S1EPX1 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EPX1_9RHOD)

HSP 1 Score: 259 bits (662), Expect = 2.280e-71
Identity = 158/379 (41.69%), Postives = 211/379 (55.67%), Query Frame = 0
Query:  550 IAEYDLSFVVA--LVPPTSQDLEAMSVNDGSSTRNVAGHLVAYIHVPSVYSETGNNRGEKSEQSKLDAKHVDAEWWCFNDFVIAPCEGFDEVAAFHKFWKKPCVIAYVRR----DINNRVKMEIDDTAVDVREVIGEEPHNAAIGLQPDE--EVPGKGTVLALDCEFVMVSRDEADIFGDGTRQIVVPARMALARVSVIRGYGRLKGVALIDDYVA--VREPVLDYLTRFSGLSEGDLDATRSPHKVSSLKSVYKRLRCLVDAGCIFVGHGLKSDFRIINFVVPLDQVIDTVTLFRVKNKRLLGLRFLSNALLGGDIQSATHDSIEDSDAALRLYDVYLTLKEGEDGDDRFERTLKELYAYGYAHGWKADPDDPFVIPQ 918
            + EY+L  V+A   V    Q+  A S ++ S   +   H V+YI  P   S                       WW  NDF I  CE  +EV AF   WK P +I Y ++    D ++    +I+        + G    N AI L   E   V G+G ++ALDCEFV + R +  I      + + PA MALARVSV+RG G   G   +DDY+A  V E   DYLTRFSGL+ GDL    S + +  LKSVY++L CL++AGCIFVGHGLKSDFR+INFVVP +QVIDTV L+++  KR+L LRFL+ A+LG  IQ+ +HDS+ED+ +AL LY  Y  L        +F+  L +LYAYG  HGW    ++PF+  Q
Sbjct:  326 LEEYELRVVLAHSFVDDQVQEQYASSTDNVSIDPSKIPHTVSYILDPDTKS-----------------------WWLINDFSIRLCEREEEVRAFCDRWKMPALILYTKKSFDHDRSSLTPPKINHLLEQKELLCGNHRINRAISLTEQELSVVVGRGKLVALDCEFVAMKRAQVSIDQKLNTREISPAVMALARVSVLRGEGESMGQPFLDDYIALPVNETPEDYLTRFSGLTAGDLTPGISRYSLVDLKSVYRKLLCLLEAGCIFVGHGLKSDFRVINFVVPPEQVIDTVRLYKLPGKRMLSLRFLTGAVLGTQIQTESHDSVEDAASALLLYRRYCALS----ASGKFQIFLNDLYAYGKQHGWTVVENEPFIFFQ 677          
BLAST of Ggra7245.t1 vs. uniprot
Match: A0A1V9XCR8 (PAB-dependent poly(A)-specific ribonuclease subunit 2-like n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XCR8_9ACAR)

HSP 1 Score: 246 bits (628), Expect = 2.240e-70
Identity = 137/333 (41.14%), Postives = 205/333 (61.56%), Query Frame = 0
Query:  586 HLVAYIHVPSVYSETGNNRGEKSEQSKLDAKHVDAEWWCFNDFVIAPCEGFDEVAAFHKFWKKPCVIAYVRRDINNRVKMEIDDTAVDVREVIGEEPH-NAAIGLQP-----DEEVPGKGTVLALDCEFVMVSRDEADIFGDGTRQIVVPARMALARVSVIRGYGRLKGVALIDDYVAVREPVLDYLTRFSGLSEGDLDATRSPHKVSSLKSVYKRLRCLVDAGCIFVGHGLKSDFRIINFVVPLDQVIDTVTLFRVKNKRLLGLRFLSNALLGGDIQSATHDSIEDSDAALRLYDVYLTLKEGEDGDDRFERTLKELYAYGYAHGWKADPDD 912
            ++++ I+V + Y E  ++ G              + W+ FNDF +   +  +EV      WK+PC++ Y R+DI  + K ++   +    ++I ++    AA  L+      D E    G ++A+D EFV ++++EA+I  DGTR  + P++ ++AR+S +RG G ++GVA IDDY+A +E V+DYLT+FSG+  GDLD T S   +++LK+ Y++LR LVD G IFVGHGLK+DFR+IN VVP +QV DTV LF+++NKR+L LRFL+    G  IQS THDSIED+  ALRLY  +L L++     D     L ELY  G  + WK   D+
Sbjct:   11 NIISLINVGAGYHERHHSSGM-------------SHWYVFNDFTVHSVKE-NEVGHMPINWKQPCMLYYTRKDIALKYK-DLKVISPITEDIIRKDTSIGAAARLKTFTPLLDSEQFNAGDIVAMDAEFVTLNQEEAEIRSDGTRATIRPSQRSVARISCLRGQGPMEGVAFIDDYIATQEQVVDYLTQFSGIQPGDLDVTVSSKHLTTLKATYQKLRLLVDKGVIFVGHGLKNDFRVINLVVPQEQVRDTVLLFQLRNKRMLSLRFLAWHFFGETIQSETHDSIEDAKTALRLYRKFLELRQR----DEINAALTELYEVGKKYSWKVPKDN 324          
BLAST of Ggra7245.t1 vs. uniprot
Match: M2WAE4 (PAB-dependent poly(A)-specific ribonuclease subunit 2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WAE4_GALSU)

HSP 1 Score: 262 bits (670), Expect = 1.210e-69
Identity = 155/381 (40.68%), Postives = 211/381 (55.38%), Query Frame = 0
Query:  553 YDLSFVVALVPPTSQDLEAMSVNDGSSTRNVAGHLVAYIHVPSVYSETGNNRGEKSEQSKLDAKHVDAEWWCFNDFVIAPCEGFDEVAAFHKFWKKPCVIAY-VRRDINNRVKMEIDDTAVDVREVIGEEPHNAAIGLQPDEE------------VPGKGTVLALDCEFVMVSRDEADIFGDGTRQIVVPARMALARVSVI---RGYGRLKGVALIDDYVAVREPVLDYLTRFSGLSEGDLDATRSPHKVSSLKSVYKRLRCLVDAGCIFVGHGLKSDFRIINFVVPLDQVIDTVTLFRVKNKRLLGLRFLSNALLGGDIQSATHDSIEDSDAALRLYDVYLTLKEGEDGDDRFERTLKELYAYGYAHGWKADPDDPFVIP 917
            YDL FV+A VP       A +    S    V GHLV Y+              E  E++  +    D+ WWC NDF I  C+   EV  FH  WK P V+ Y VR+      K+EI  +  D+ +         ++ + P  +             P KG+ +ALD EFV  SR+ A+I GDG+ +I+ PA+M+L RVSV+           V L+DDY+  RE V+DYLT++SGL+  DL+   S   +++LK+VY +LRCL+D GCI +GHGLK DFRIINF+VP  QVIDTV L+R+  +RLL LRFL+  LL  DIQ  THDS+ED+  A RL+  Y  L+E         + L++LY YG  H W+   + PFV P
Sbjct:  848 YDLHFVIAFVPKKPIYNGAHNSKAWSDFPPV-GHLVLYVR-------------ETMERTTREHCSHDSFWWCINDFCITRCQSISEVTRFHPNWKLPVVLGYKVRKSFRYIPKVEISYSLADIYQ------RACSVIINPMSDSLLCSNSVASHLFPPKGSYIALDAEFVETSREVAEIHGDGSYKILKPAQMSLGRVSVVFSTMNSSDSNFVVLMDDYLVQREHVVDYLTKYSGLTFEDLNPNTSKRPLTTLKAVYMKLRCLIDNGCILIGHGLKKDFRIINFIVPKSQVIDTVELYRLPRQRLLSLRFLAATLLHEDIQGVTHDSVEDAQTAWRLFFYYQKLQE----KGLVPQLLEDLYKYGREHHWQYSLEHPFVSP 1204          
BLAST of Ggra7245.t1 vs. uniprot
Match: A0A7M4EFB7 (Poly(A) specific ribonuclease subunit PAN2 n=1 Tax=Crocodylus porosus TaxID=8502 RepID=A0A7M4EFB7_CROPO)

HSP 1 Score: 246 bits (628), Expect = 2.160e-69
Identity = 144/366 (39.34%), Postives = 208/366 (56.83%), Query Frame = 0
Query:  563 PPTSQDLEAMSVNDGSST------RNVAGHLVAYIHVPSVYSETGNNRGEKSEQSKLDAKHVDAEWWCFNDFVIAPCEGFDEVAAFHKFWKKPCVIAYVRRDINNRVKMEIDDTAVDVREVIGEEP--------HNAAIGLQPDEEVPGKGTVLALDCEFVMVSRDEADIFGDGTRQIVVPARMALARVSVIRGYGRLKGVALIDDYVAVREPVLDYLTRFSGLSEGDLDATRSPHKVSSLKSVYKRLRCLVDAGCIFVGHGLKSDFRIINFVVPLDQVIDTVTLFRVKNKRLLGLRFLSNALLGGDIQSATHDSIEDSDAALRLYDVYLTLKEGEDGDDRFERTLKELYAYGYAHGWKA-DPDDP 913
            P  S D +++ V D  +T          G LV +I V           GE   Q K    H   +W+ FNDF+I P + ++ V  F   WK P V+ Y RR++N +  + I +  ++   ++ E          H   I L   E +P  G ++ LD EFV ++ +EA++  DGT+  + P++M++AR++ +RG G  +GV  IDDY++ +E V+DYLT++SG+  GDLDA  S   +++LKS Y +LR L+D G  FVGHGL+ DFR+IN +VP DQVIDTV LF +  KR++ LRFL+   L   IQ+ THDSIED+  AL+LY  YL L +G    D   + LK LY  G    WK  +PD P
Sbjct:   55 PSVSDDPDSVHVYDLMATVVHILDSRTGGSLVGHIKV-----------GETYHQRKEGVTHQ--QWYLFNDFLIEPVDKWEAVQ-FDMSWKVPAVLYYARRNLNAKYNLAIKNP-IEASVLLAEASLARKQRKCHATFIPLMLSE-MPQAGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGVPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDVGVKFVGHGLQKDFRVINLMVPKDQVIDTVYLFHIPRKRMISLRFLAWYFLDLKIQAETHDSIEDARTALQLYRKYLALSQGGAEPDDVRKVLKGLYEKGRKMDWKVPEPDGP 404          
The following BLAST results are available for this feature:
BLAST of Ggra7245.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2390.000e+055.74PAB-dependent poly(A)-specific ribonuclease subuni... [more]
R7QR640.000e+046.09USP domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A5J4YMM79.730e-8745.39PAB-dependent poly(A)-specific ribonuclease subuni... [more]
A0A7M7J6751.510e-7241.18Exonuclease domain-containing protein n=3 Tax=Varr... [more]
K1R0552.040e-7139.71PAB-dependent poly(A)-specific ribonuclease subuni... [more]
A0A1X6P7452.230e-7157.87Exonuclease domain-containing protein n=1 Tax=Porp... [more]
A0A7S1EPX12.280e-7141.69Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1V9XCR82.240e-7041.14PAB-dependent poly(A)-specific ribonuclease subuni... [more]
M2WAE41.210e-6940.68PAB-dependent poly(A)-specific ribonuclease subuni... [more]
A0A7M4EFB72.160e-6939.34Poly(A) specific ribonuclease subunit PAN2 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 700..883
e-value: 6.9E-20
score: 82.1
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 703..874
e-value: 1.3E-17
score: 64.8
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 519..666
e-value: 1.1E-11
score: 46.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR15728DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2coord: 553..908
coord: 44..409
NoneNo IPR availableCDDcd06143PAN2_exocoord: 702..875
e-value: 4.09434E-84
score: 265.634
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 37..377
e-value: 7.6E-46
score: 158.6
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 697..897
e-value: 3.1E-37
score: 129.8
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 698..878
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 55..376

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:418646..422350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7245.t1Ggra7245.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 418646..422350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7245.t1 ID=Ggra7245.t1|Name=Ggra7245.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=919bp
MNSQFVPPRSPPADEAQAPPVYSEADQYYYDAAAEHMPPHGWYEHSCTQV
GHPNSHADPIRALACDPVKELIWAATASGMLHAHHAPDMARIVSTYVGEP
SSDPSNHGDVRDIVVSSTSVLAAVSYGLAVVKRGGVLVASIRADTIRNAK
ALALNPVSDDHVCVGGESRMLAVVDVQQQRILRQATLRGATGVTAAVWTA
PQAASSLAVFSTSTGRISLCDPSSMREVNAIAAFAGATTSIATSGYYLAA
TGLGTRGGVPYLEQTVKLYDIRAVQNPLPSVLFSAPPMFIAFDHATSQIY
NTDGALWMLSPHGVMQLLDISTVTNREPAYPLCDEIHLDAGSDVFTAMVV
SSQGLLVLGDSGGFVHQWSSSESVKVNSSSEPVWTTPVNPEPPTPSIHMD
DFINLDIGGTIPKCAMPEFECEYLTEELFTSVSNQPQRRKRGELIAERSK
YVEMDLVAWESIEGFDFLKYNTSPRFCGLENALPNVNASHNLDGIAVKAM
QEAKKIVQSMRVELTDGISVTEIDSLASCGKSSLGYDAIEGSFSDTGNLI
AEYDLSFVVALVPPTSQDLEAMSVNDGSSTRNVAGHLVAYIHVPSVYSET
GNNRGEKSEQSKLDAKHVDAEWWCFNDFVIAPCEGFDEVAAFHKFWKKPC
VIAYVRRDINNRVKMEIDDTAVDVREVIGEEPHNAAIGLQPDEEVPGKGT
VLALDCEFVMVSRDEADIFGDGTRQIVVPARMALARVSVIRGYGRLKGVA
LIDDYVAVREPVLDYLTRFSGLSEGDLDATRSPHKVSSLKSVYKRLRCLV
DAGCIFVGHGLKSDFRIINFVVPLDQVIDTVTLFRVKNKRLLGLRFLSNA
LLGGDIQSATHDSIEDSDAALRLYDVYLTLKEGEDGDDRFERTLKELYAY
GYAHGWKADPDDPFVIPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf
IPR036322WD40_repeat_dom_sf