Ggra1008.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1008.t1
Unique NameGgra1008.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length380
Homology
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BLAST of Ggra1008.t1 vs. uniprot
Match: A0A2V3IMG7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMG7_9FLOR)

HSP 1 Score: 366 bits (940), Expect = 5.570e-122
Identity = 249/371 (67.12%), Postives = 301/371 (81.13%), Query Frame = 0 
Query:   11 SLLLASLALAQVPCMGTVTGTVSDNLLVDGIACSVNGATITGSVEIINGGSLTTTGATQXXXXXXXXXXXXXXXXXXXXXXXDVSSEASPSSVVLVGTDAVLGKVSLKDSGSVDVEGTVLSVLNENSGVVTVTSGTVGG--ISAKLGSGNVILCDANITGSVEIVERTGDLSAEESASCPMSSISGGIVVEKGTGDVRLVGASFTGGDLSVVEQTGDIVITSAMLSDIGISSLTGSVTLTMIEADSXXXXXXXXXXXXXXXXXXXXXXXXXGSAAISVTNSKFANEGVSVKGNTGPVVFSMNTELSVEIIENDDVTVSNNNVGVASISVXXXXXXXXDNTFVELGCVDNNPAPVGSDNTVTLTASGQCAAF 379
            S+ + + A AQ PC GT+TGT+ D++LVDG++C++ GA ITGSV++INGG+L TTGATQXXXXXXXXXXXXXXXXXXXXXXX    E+SPSS ++VG++AVLGK+SLKDSG V V G V +VL+ENSG V V  GTVGG  I AKLGSGN++LCDAN+TGSV ++ER G+L AEES+SCP ++I+GGI++EKG GD R++GA+FT GDLSVV+Q GD+ ITSA+LSDIGIS+L GSVTL+MIE DSXXXXXXXXXXXXXXXXXXXXXXXXX   ++SVT S FANE VSV  N GPV FS NTELS+EI ENDDVT++NN + +ASIS          NT  EL CVDN P PVGS NT+ L A+GQCA+F
Sbjct:   12 SITIFTAAFAQTPCTGTITGTIVDDVLVDGVSCTIQGAIITGSVQVINGGTLNTTGATQXXXXXXXXXXXXXXXXXXXXXXXXXXXESSPSSTIVVGSNAVLGKISLKDSGRVTVRGFVSAVLSENSGRVLVRGGTVGGGGIEAKLGSGNIVLCDANVTGSVGVIERAGNLLAEESSSCPKTTITGGILIEKGNGDARVIGANFTSGDLSVVDQIGDVTITSALLSDIGISNLDGSVTLSMIETDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSVTGSSFANESVSVITNAGPVEFSSNTELSLEISENDDVTLTNNEIAIASISSNTGGVGIAGNTITELNCVDNMPPPVGSGNTILLIATGQCASF 382
The following BLAST results are available for this feature:
BLAST of Ggra1008.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMG75.570e-12267.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..379
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:383436..384575 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1008.t1Ggra1008.t1Gracilaria gracilis GNS1m malemRNAtig00000027_pilon 383436..384575 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1008.t1 ID=Ggra1008.t1|Name=Ggra1008.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=380bp
MIRISHAIISSLLLASLALAQVPCMGTVTGTVSDNLLVDGIACSVNGATI
TGSVEIINGGSLTTTGATQIFGSVLAASSGDISLLGTTTVSGDVSSEASP
SSVVLVGTDAVLGKVSLKDSGSVDVEGTVLSVLNENSGVVTVTSGTVGGI
SAKLGSGNVILCDANITGSVEIVERTGDLSAEESASCPMSSISGGIVVEK
GTGDVRLVGASFTGGDLSVVEQTGDIVITSAMLSDIGISSLTGSVTLTMI
EADSDVGLGGVTGSISLSDSTVAGDVGIEGSAAISVTNSKFANEGVSVKG
NTGPVVFSMNTELSVEIIENDDVTVSNNNVGVASISVNTGGVSITDNTFV
ELGCVDNNPAPVGSDNTVTLTASGQCAAF*
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