Ggra1016.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1016.t1
Unique NameGgra1016.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length616
Homology
BLAST of Ggra1016.t1 vs. uniprot
Match: A0A2V3IEM1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEM1_9FLOR)

HSP 1 Score: 165 bits (417), Expect = 4.560e-40
Identity = 202/596 (33.89%), Postives = 293/596 (49.16%), Query Frame = 0
Query:    7 NSLEKALALERAVLRYNDINAMINLGRLLLYNEQ------FVSQRARGLQMLERAIKQAQHPFAMYSVADYLLTCKRREDHCRAYSLLERSMKLKENPYVLTRLGYCYVRGKGVAKDVNVAAQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSDAEMMNDLGLLYHNGCENLSACTKKASKWYLRAIQTSEYPSAMYNLAVLLLNNEPSEDQ-VKRAISLLEDAMKLEEQKDVVTIVKLAEAYSEHR--IDVERALELYETAAIHFNSQRARSALLGAWIDGMGGQTIKHTRIQDFCWRDFK-QNDDNDSLVVFSMMTWTGTRDNQMDPKKAVQLLTSNRWTGHGSL-SLVLRHDLDKYPHGRKNAERLMKKFDDEIDPCNLKDLESIVFSERSCDGDKLSALESFRKQRDVPSSLDEITWLVPHLRVGRRILPFDGDPDWVTNVMRRFSRWKYISSLNLASLLLEIDGKQQK----AVAVLEDLMNSDLRVIAMLNLAYILINDVDGVKKDVGKGMQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWCSVEKEVEEEEELRKVRRLIS 587
            ++++ A   ERA+ R+ND++AMI LG +LL          +     RG+Q+LERA+KQA +P A   +A +      ++   R  SLLE + +   +P  L  L      G    KD       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++++++M+ L  LYH G  NL    + A KWY R+I   E+  + Y LA LLL     E +   RA  LLEDA  L +     +++ LA  Y+ HR   ++ RA  L E A   F S  A   LL     G  G  + H R    C R     N     +++ + + W+G+   ++D ++A+Q+        HG + +L+LR+D    P  RK A      F      C +  L  +   +     D + A + FR  R      D + W+  ++R     LP+ GD    T  + RF     I+SLNLASLLL+   K  +    A+ +LE LM ++LR IA +NL Y+L   V G+ +D  + +++                                        ++  E+ +EEEL+K+ RL+S
Sbjct:    7 SAVQLAKRYERAIKRFNDVDAMIQLGHMLLSGRHSSGAVGYKIDHCRGVQLLERAVKQADNPRAKALLALHFRDFGNKKQRRRVVSLLEDAFRQMGDPVSLHVLAKVLYDGDCGEKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNESDIMHRLARLYHEGTVNLEPSFENAVKWYQRSIDVGEHCDSKYYLARLLLETPVGEYRDPTRAALLLEDA--LTQSYTERSLICLANVYTVHRQVANIPRAAYLLERAVCDFGSTAATVHLLNFCAFGFQGFPLDHQRAILICERHLSCTNPHRTVMMIMASILWSGSVSVRVDRERAIQVARQIE-NDHGIMFALMLRYDAPSRPADRKLAASYFTNFRH----CYVNAL--LTSEQEDPRFDSVQAEQMFRLARGNLLGTDYLGWIPLYIRKSTLGLPYHGDERCFTKNVMRFCSVANITSLNLASLLLDRTSKSPEQCAEAITILECLMETELRDIAAVNLCYVLWYGVGGIAQDQPRALKMLVRFIGETRDVSARVLLASTLAERANESNWNLESSSWTLSAIRAEISDEEELQKLARLLS 593          
BLAST of Ggra1016.t1 vs. uniprot
Match: A0A2V3ITQ7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITQ7_9FLOR)

HSP 1 Score: 164 bits (415), Expect = 5.930e-40
Identity = 196/509 (38.51%), Postives = 277/509 (54.42%), Query Frame = 0
Query:   28 MINLGRLLLYNEQFVSQRARGLQMLERAIKQAQHPFAMYSVADYLLTCKRREDHCRAYSLLERSMKLKENPYVLTRLGYCYVRGKGVAKDVNVAAQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSDAEMMNDLGLLYHNGCENLSACTKKASKWYLRAIQTSEYPSAMYNLAVLLLNNEPSEDQV----KRAISLLEDAMKLEEQKDVVTIVKLAEAYSEHR--IDVERALELYETAAIHFNSQRARSALLGAWIDGMGGQTIKHTRIQDFCWRDFKQNDDNDSLVVFSMMTWTGTRDNQMDPKKAVQL---LTSNRWTGHGSLSLVLRHDLDKYPHGRKNAERLMKKFDDEIDPCNLKDLESIVFSE--RSCDGDKLSALESFRKQR-DVPSSLDEITWLVPHLRVGRRILPFDGDPDWVTNVMRRFSRWKYISSLNLASLLLEIDGK----QQKAVAVLEDLMNSDLRVIAMLNLAYILINDVDGVKKD 520
            MI L  LL+Y+E +  +  RG+QMLERAIKQA  P AMY +A Y L    R  + +A +LLERS+   E+P VL  L +    G GV +++      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        N LG+++ +G  +     ++A KW+ RAI+    PSA +NLAV+L       D+V     RA  LLE+ +  EE      I++LAE YS     ++  RA+ L   A   FNS  AR +L      G G    + T +  F  R +++  D  S++  S M W+GT +   D +++V L   L      G+  L+ +LR+     P   K A  + ++   + D   +  + +I+ SE   S D D   A+E FR    D P  +  + WL   LR     LP  G+   +T  ++R+     I+ LNLASLL+E         ++AV +LE L+++ +  +A LNL Y+L N+V G+ +D
Sbjct:    1 MIALANLLMYSEDYRDEE-RGIQMLERAIKQAGSPLAMYRLARYYLDFGSRSQYHKAVALLERSLHQSEDPAVLHLLSFAVASGLGVRRNIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNALGVVFADGAPHFPPNARRAVKWFNRAIEVGNLPSAKHNLAVILTQTH---DKVMPDPSRAALLLEEVV--EETGKQGAILQLAELYSNWLSVLNYPRAVTLLTRAVHEFNSYPARFSLARMLAFGEGVPAQRATALGLFE-RHYEKVHDIGSMLNLSEMLWSGTEELPADMERSVSLCKQLCRKTDIGNYVLASMLRYGAPTLPRNLKQAITICEREKADDDHFIML-VHAILLSEDPESNDSDISHAIELFRALSVDTPLQMWWV-WLPLSLRTSSVDLPIHGNEHCITESVKRYEEVNVIAKLNLASLLVEDRSPTLQDSEEAVQLLESLIDTRIGDLAALNLGYLLWNEVGGIPQD 500          
BLAST of Ggra1016.t1 vs. uniprot
Match: A0A2V3IEN9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEN9_9FLOR)

HSP 1 Score: 160 bits (404), Expect = 2.510e-38
Identity = 210/607 (34.60%), Postives = 309/607 (50.91%), Query Frame = 0
Query:    7 NSLEKALALERAVLRYNDINAMINLGRLLLY-NEQFVSQRARGLQMLERAIKQAQHPFAMYSVADYLLTCKRREDHCRAYSLLERSMKLKENPYVLTRLGYCYVRGKGVAK-DVNVAAQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSDAEMMNDLGLLYHNGCENLSACTKKASKWYLRAIQTSEYPSAMYNLAVLLLNNE-PSEDQVKRAISLLEDAMKLEEQKDVVTIVKLAEAYSE--HRIDVERALELYETAAIHFNSQRARSALLGAWIDGMGGQTIKHTRIQDFCWRDFKQNDDNDSLVVFSM--MTWTGTRDNQMDPKKAVQLLTSNRWTGHGSLSLVLRHDLDKYPHGRKNAERLMKKFDDEIDPCNLKDLESIVFSERSCDGDKLSALESFRKQRDVP-SSLDE--ITWLVPHLRVGRRILPFDGDPDWVTNVMRRFSRWKYISSLNLASLLLEIDGKQ----QKAVAVLEDLMNSDLRVIAMLNLAYILINDVDGVKKDVGKGMQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWCSVEKEVEEEEELRKVRRLISQRSEKKWSALGF 599
            ++ ++A   ERA+   NDI+AMI L  +L + +E F  + +RG+Q+ ERAIKQA    A+  +  Y      R +  RA  LLER+++  EN   +  L  C++  +   K D+      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            +LY +G   L    KKA+KWY  AI T+    +   LA+LL + +     Q  RA  LLE+A  LE+    V +++LA+ Y E        RALEL+E+AA  +NS  A  +LL     G  G  + + R      + F+    +DS V ++   + W G  + + D ++A+ +    RW    +LSL+LR+     P  R+ A++  K+ +++        + S+  SE   D  +     +    RD+P S LD   I WL   LR+G   LP+ GD    T   R+F + K I  LNLASLLLE   K      + V + E LM++ +  IA +NL+Y+L   + G+ ++  + ++L                                      W SV+++ EEEEEL+K+  L+S  ++   S +GF
Sbjct:    7 SAADRARTFERAIKANNDIHAMIGLACMLTFGDEDFPKEPSRGVQLFERAIKQANAQRALLFLGLYFQHEGNRSERRRALPLLERAVQCWENYECIHALA-CFLMDEQCPKQDLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLYESGTPLLPRSFKKAAKWYQSAIDTAGDHRSKSCLALLLTSRDWDHPPQPARAAQLLEEA--LEQHHCEVYLLELADLYVEFPELQKTARALELFESAAKQYNSYEAIRSLLDFLAYGEQGFPVDYQRALSVL-KHFRVQGGHDSFVEYTTACILWNGAFNVKRDRERAISIARPRRWFQDCTLSLMLRYGAPNLPRDRRAAKKYYKRIEEKT---YFDLVHSLFISEP--DDPEYDPARAEAIFRDIPISELDSGYIGWLPLSLRMGNIKLPYTGDERCFTYSFRKFGKGKDILVLNLASLLLEKTPKSVETGNEIVEMYESLMDTAVGDIATMNLSYLLWKGIAGITQNRKRAIELLDKLVQEKNNASARVLLASILAEDAGENNKQLERCSALWNSVKEDTEEEEELQKLAMLLSTTAK---SVIGF 601          
BLAST of Ggra1016.t1 vs. uniprot
Match: A0A2V3J3A2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3A2_9FLOR)

HSP 1 Score: 118 bits (295), Expect = 3.230e-24
Identity = 146/607 (24.05%), Postives = 244/607 (40.20%), Query Frame = 0
Query:   10 EKALALERAVLRYNDINAMINLGRLLLYN--EQFVSQRARGLQMLERAIKQAQHPFAMYSVADYLLTCKRREDHCRAYSLLERSMKLKENPYVLTRLGYCYVRGKGVAKDVNVAAQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSDAEMMNDLGLLYHNGCENLSACTKKASKWYLRAIQTSEYPSAMYNLAVLLLNNEPSEDQVK-RAISLLEDAMKLEEQKDVVTIVKLAEAYSEHRI--DVERALELYETAAIHFNSQRARSALLGAWIDGMGGQTIKHTRIQDFCWRDFKQNDDNDSLVVFSMMT--WTGTRDNQMDPKKAVQLLTSNRWTGHGSLSLVLRHDLDKYPHGRKNAERLMKKFDDEIDPCNLKDLESIVFSERSCDGDKLSALESFRKQRDVPS--SLDE-----ITWLVPHLRVGRRILPFDGDPDWVTNVMRRFSRWKYISSLNLASLLLEIDGKQQKA---VAVLEDLMNSDLRVIAMLNLAYILINDVDGVKKDVGKGMQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWCSVEKEVEEEEELRKVRRLISQRSEKKWSALGF 599
            ++A A E A+   ND  A+++L  LLL +  ++    R+RG+Q+LERAIKQ     A+  ++        R                  N   L  L       +    D+  A Q+                                           +++   +M  LG LY  G   L        KWY RAI   +Y  A Y LA  L + E  + +   RA  L E+A  L++       + LA+ Y ++      ER + LYE  A  +NS++A+ AL+     G+    I   R+     + ++ +     L+  ++ +  W+G    +   K AV +  + RW    +LSL+LR+     P  R  A++  ++  ++       D+   +F     D +     +  R  R +PS  +LD        WL  +LR+ +   P+ G     T  ++RF+    I  LN+ASLLLE     + +   + + EDLM ++L  +A LNL+Y+L   V  V +D  + + L                                      W +VE+E +E+EEL+K+ RL+S ++    + LGF
Sbjct:   10 DEARAYEEAIKNGNDEYALVDLAVLLLTDKDDEPAPDRSRGIQLLERAIKQFASQGALVELSYQYRFSDSRSXXXXXXXXXXXXXXXXPNMVSLVGLAKALADPELPMYDLERAVQIFKRCSRNGRASLVMADLAELQLRQPSLRVDRRSALRLFKDAIKVSNSPSLMTKLGHLYSTGTALLPRSYDDMIKWYQRAIDDGKYSPAKYYLACALTSTEWDQPRKPFRASQLFEEA--LDQNPCEGYALALADLYVDYLELQKTERGILLYEATAKKYNSRKAKCALIYILAHGLFDIPIDCKRVLTIL-KPYRSSSARCRLITETVASVLWSGAIGIKPRRKFAVDIARTTRWPNDYTLSLMLRYGAPGLPVNRHAAKKRYRQVKNKA----AYDIAHSLFISEPSDPE----YDPGRAIRIIPSIVTLDSEYVTAFGWLPLYLRMSKIRFPYHGHEQCFTYSVKRFAGLHDILILNMASLLLEEPSSSETSNTIICMFEDLMGTELHDVATLNLSYVLWKGVGVVPQDKARAIGLLEGLVEERNDISARVLLTSILAEETNENNIQRCLSL--WRTVEEETDEDEELKKLSRLLSAKAN---TVLGF 600          
BLAST of Ggra1016.t1 vs. uniprot
Match: A0A2V3IUV8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUV8_9FLOR)

HSP 1 Score: 107 bits (267), Expect = 1.160e-20
Identity = 130/525 (24.76%), Postives = 209/525 (39.81%), Query Frame = 0
Query:   16 ERAVLRYNDINAMINLGRLLL-YNEQFVSQRARGLQMLERAIKQAQHPFAMYSVADYLLTCKRREDHCRAYSLLERSMKLKENPYVLTRLGYCYV-RGKGVAKDVNVAAQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTSDAEMMNDLGLLYHNGCENLSACTKKASKWYLRAIQTSEYPSAMYNLAVLLLNNEPSEDQVKRAISLLEDAMKLEEQKDVVTIVKLAEAYSEHRIDVERALELYETAAIHFNSQRARSALLGAWIDGMGGQTIKHTRIQDFCWRDFKQNDDNDSLVVFSMMTWTGTRDNQMDPKKAVQLLTSNRWTGHGS--LSLVLRHDLDKY-PHGRKNAERLMKKFDDEIDPCNLKDLESIVFSERSCDG----DKLSALESFRKQRDVPSSLDEITWLVPHLRVGRRILPFDGDPDWVTNVMRRFSRWKYISSLNLASLLLEIDG----KQQKAVAVLEDLMNSDLRVIAMLNLAYILINDVDGVKKDVGKGMQL 527
            E A+   N+  AM+ L  ++L +N        RG+Q+LERAIKQAQ P AM+++  YL     R +  RA                L  L    V R  G+A     AAQL                                           LT+D E MN LGL Y +G   +    ++A KW+ RAIQ +++  A YNLAV+L+   P +    R++ LL++ +     KD V  +       +   +   A  LY+ A   ++S  A   L+   + G     +   R      R ++   D                                R     S   + +LR    +     R  A  LM+    + +P + K L +++ SE+        D   A +    + +  +      W+  +LRV    LP  GDP+ +T   +R     +++ +NLA L LE  G    +  +AV +L  L+N+ +  +A +NL ++L N + GVKKD  + ++L
Sbjct:   20 ENAIKFTNNPTAMVELAIMMLNHNTGITRDTDRGVQLLERAIKQAQSPRAMHNLGLYLDDVGNRSERRRAXXXXXXXXXXXXXXXFLYGLASALVDRRCGIAPQPVRAAQLLRRALRLGENPKCMWLLATLLVADPTIQPDTAYAMRLFKRSIQLTNDPEKMNILGLYYADGVLRIRPNKRRAIKWFERAIQCADHAYAKYNLAVMLVLRNPPDPL--RSVRLLKEVILTNGDKDAVLFLASVLCAVKQVENYALAHALYDFAVRVYDSTEAMMKLVDYLMIGSPALAVDIPRAFRLLERHYEIAKDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYRVIKGDSEFTATLLRFGAPQVLVPDRPRALALMQAHS-KAEPDDDKLLLAVLISEQGYHDLEQVDYEQAAQLLEAECESVARKHTFLWMPFYLRVSTIPLPVHGDPNSLTLCTKREECIPHVAQINLAGLYLEGRGLAPDEADRAVNLLTSLLNTRVADLAAMNLGFVLWNGIAGVKKDTVRALEL 541          
The following BLAST results are available for this feature:
BLAST of Ggra1016.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IEM14.560e-4033.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITQ75.930e-4038.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEN92.510e-3834.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J3A23.230e-2424.05Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUV81.160e-2024.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 25..60
e-value: 150.0
score: 3.5
coord: 500..536
e-value: 0.65
score: 19.0
coord: 210..245
e-value: 68.0
score: 6.4
coord: 172..208
e-value: 87.0
score: 5.5
coord: 98..133
e-value: 8.2
score: 14.4
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 172..203
e-value: 230.0
score: 2.7
coord: 210..222
e-value: 72.0
score: 4.3
coord: 27..58
e-value: 150.0
score: 3.3
coord: 265..277
e-value: 75.0
score: 4.2
coord: 502..529
e-value: 5.7
score: 7.8
coord: 102..130
e-value: 0.026
score: 15.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 3..388
e-value: 4.3E-35
score: 123.1
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 15..167
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 15..167
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 155..288
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 155..288
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 154..277
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 7..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:540674..542521 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1016.t1Ggra1016.t1Gracilaria gracilis GNS1m malemRNAtig00000027_pilon 540674..542521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1016.t1 ID=Ggra1016.t1|Name=Ggra1016.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=616bp
MDSDDENSLEKALALERAVLRYNDINAMINLGRLLLYNEQFVSQRARGLQ
MLERAIKQAQHPFAMYSVADYLLTCKRREDHCRAYSLLERSMKLKENPYV
LTRLGYCYVRGKGVAKDVNVAAQLCERALRLKQEPYIMGCLAWALLNAPN
LHAQKKRALALYKKAIELTSDAEMMNDLGLLYHNGCENLSACTKKASKWY
LRAIQTSEYPSAMYNLAVLLLNNEPSEDQVKRAISLLEDAMKLEEQKDVV
TIVKLAEAYSEHRIDVERALELYETAAIHFNSQRARSALLGAWIDGMGGQ
TIKHTRIQDFCWRDFKQNDDNDSLVVFSMMTWTGTRDNQMDPKKAVQLLT
SNRWTGHGSLSLVLRHDLDKYPHGRKNAERLMKKFDDEIDPCNLKDLESI
VFSERSCDGDKLSALESFRKQRDVPSSLDEITWLVPHLRVGRRILPFDGD
PDWVTNVMRRFSRWKYISSLNLASLLLEIDGKQQKAVAVLEDLMNSDLRV
IAMLNLAYILINDVDGVKKDVGKGMQLLEDAVKETNEVSARAMLANALSE
GPDSDAGDVEKGWKLWCSVEKEVEEEEELRKVRRLISQRSEKKWSALGFR
KGQERTEKFESNGKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf