Ggra1075.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1075.t1
Unique NameGgra1075.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length344
Homology
BLAST of Ggra1075.t1 vs. uniprot
Match: A0A2V3IR24 (Transcription initiation factor IIB n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR24_9FLOR)

HSP 1 Score: 608 bits (1569), Expect = 6.930e-219
Identity = 302/337 (89.61%), Postives = 321/337 (95.25%), Query Frame = 0
Query:    7 MPSLAPPMEREMPEECPECGSDDIVENWREGTADCRGCGLIIIERLLDLGTEWRTFTSEEGDDPNRAGPANNPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRHRDRLNLAKSVSDRALELFKRYQDHLTTKIVSTPGQPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICALTGVPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVAGEMQNHGVLHGKTYTTLAAASIYIVTLLCKAEHKRSAKEIADVTGVAEVTIKSTYRQFYPHIEGVIPDDFECAVSVSDLPQP 343
            MPSLAPPMEREMP+ECPECGSDDIVENWR+G+ADCRGCGL+I ERLLDLGTEWRTFT+EEGDDPNRAGPANNPLLEFEHGT IGTGAKGGGALS+SLNRAQNRNATSAADKVMMEVIQRIGR+R+RLNLAKSVSDRALELFKRYQDHLTTK V+ PG+ +KRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICALTGVPKKNVGATVKKME+ LTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVA EMQNH VLHGKTYTTLAAASIYIVT LCK E KRSAK+IA+VTGVAEVTIKSTYR FYP+IEGVIP++ E A+ VS+LP P
Sbjct:    1 MPSLAPPMEREMPQECPECGSDDIVENWRQGSADCRGCGLVIAERLLDLGTEWRTFTAEEGDDPNRAGPANNPLLEFEHGTGIGTGAKGGGALSISLNRAQNRNATSAADKVMMEVIQRIGRYRERLNLAKSVSDRALELFKRYQDHLTTKNVAGPGEAEKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICALTGVPKKNVGATVKKMEQALTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVAHEMQNHEVLHGKTYTTLAAASIYIVTQLCKREDKRSAKDIAEVTGVAEVTIKSTYRLFYPYIEGVIPEELETAIKVSELPAP 337          
BLAST of Ggra1075.t1 vs. uniprot
Match: R7QNA6 (TFIIB-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNA6_CHOCR)

HSP 1 Score: 448 bits (1153), Expect = 1.070e-155
Identity = 229/330 (69.39%), Postives = 266/330 (80.61%), Query Frame = 0
Query:   14 MEREMPEECPECGSDDIVENWREGTADCRGCGLIIIERLLDLGTEWRTFTSEEGDDPNRAGPANNPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRHRDRLNLAKSVSDRALELFKRYQDHLTTKIVSTPGQPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICALTGVPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVAGEMQNHGVLHGKTYTTLAAASIYIVTLLCKAEHKRSAKEIADVTGVAEVTIKSTYRQFYPHIEGVIPDDFECAVSVSDLPQP 343
            MERE+PEECPEC SDDI+E+W  G A CR CGL++ +RLLDLGTEWRTFT+EEGDDPNRAGPA NPLLE E GTSIG GA+GGG L+ +LNRAQ RNA S ADKVM+ V+ RI R  +RL+L  S+S RA ELFKRY+DHLT K   T   PD   R+R LR+EEV+EI+ASSLFIACRN+K AR+YKEIC LT VPKKNVGATVKKME  L  AKTTYVRGTDDFVTRF N LDLPRDVINAADAVA  +QN   ++GKTYTT+AA+SIY+VT L   +H R+AKEIADVTGVA+VTIK+TYR  YP+I+ V+P DF+ A  +S LP P
Sbjct:    1 MERELPEECPECESDDIIEDWAHGNAVCRSCGLVVQDRLLDLGTEWRTFTAEEGDDPNRAGPAANPLLEGEQGTSIGNGARGGGQLNKALNRAQQRNAISDADKVMIAVMGRIDRFCERLSLTGSISKRAKELFKRYRDHLTLK--KTASNPDVFTRSRPLRDEEVSEIIASSLFIACRNEKAARTYKEICGLTKVPKKNVGATVKKMELVLEGAKTTYVRGTDDFVTRFCNLLDLPRDVINAADAVANALQNQEGVYGKTYTTVAASSIYVVTQLSDDKHVRTAKEIADVTGVADVTIKTTYRLIYPYIKKVLPKDFKPAKPLSRLPPP 328          
BLAST of Ggra1075.t1 vs. uniprot
Match: A0A7S3EGB1 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EGB1_9RHOD)

HSP 1 Score: 271 bits (692), Expect = 1.310e-85
Identity = 147/350 (42.00%), Postives = 222/350 (63.43%), Query Frame = 0
Query:    1 MASFNG--MPSLAPPMEREMPEECPECGSDDIVENWREGTADCRGCGLIIIERLLDLGTEWRTFTSEE-GDDPNRAGPANNPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRHRDRLNLAKSVSDRALELFKRYQDHLTTKIVSTPGQPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICALTGVPKKNVGATVKKMERQ----LTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVAGEMQNHGVLHGKTYTTLAAASIYIVTLLCKAEHKRSAKEIADVTGVAEVTIKSTYRQFYPHIEGVIPDDFECAVSVSDLPQP 343
            MA  N   +PSLAP +ER+ PEECPECGS DIVE+W+EG   CR CGL+I E+L+DLG EWRTFT++E G DPNRA    NPLLE    TSI    +GG  +  SLNRAQN +  SA+D+ +++V   I +  +R ++   V +R  E+FK Y D LT +   T        R R+LREEE  +I+A  L ++ R + + R++ EI  +TGVPK+++G  VK ++++    +  + TTY    +D V R  + L L R V+NAA  +A + ++   ++G+T  ++AAA I+I+  L   + +++AK+++D   VAEVTI++ Y + YPH++G++P+ +E +    DLP P
Sbjct:    1 MAKINSSVLPSLAPELERDTPEECPECGSPDIVEDWKEGQNVCRSCGLVIQEKLVDLGCEWRTFTNDEPGADPNRASGPANPLLESGANTSISM--EGGRGIGSSLNRAQNMHTISASDRYLLDVFAEISKLCERNSIPHKVQERCNEMFKLYYDVLTLRADGT--------RVRSLREEETKQIIAGVLLLSLRGENMTRTFTEISRMTGVPKRDLGRVVKLIDKRVKSTIATSATTYT-SMEDVVLRCCSALGLERKVVNAATELANKARDLDRVYGRTPVSIAAACIFIICQLGPQDERKTAKQVSDAALVAEVTIRAAYNKIYPHLKGILPEGYENSERFKDLPVP 339          
BLAST of Ggra1075.t1 vs. uniprot
Match: A0A5J4YSQ3 (Transcription initiation factor IIB n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSQ3_PORPP)

HSP 1 Score: 261 bits (667), Expect = 1.140e-81
Identity = 149/336 (44.35%), Postives = 212/336 (63.10%), Query Frame = 0
Query:    2 ASFNGMPSL--APPMEREMPEECPECGSDDIVENWREGTADCRGCGLIIIERLLDLGTEWRTFTSEE-GDDPNRAGPANNPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRHRDRLNLAKSVSDRALELFKRYQDHLTTKIVSTPGQPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICALTGVPKKNVGATVKKMERQL-TDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVAGEMQNHGVLHGKTYTTLAAASIYIVTLLCK-AEH-KRSAKEIADVTGVAEVTIKSTYRQFYPHIEGVIPDDF 331
            A+  G P +  AP +ER++PE+C ECGSDDIVE+W++GT  CRGCGL++   ++DLG+EWRTFTS+E G DPNR G   NPLLE    T I    +  G     LNRAQ RNA S++D+ +M+V  +IG+  +  +++K V DR  E+FKRY D LT K       PD   R+R+L E+E NEI+A++L IA R+  +ARS+KEI  LT VPK+N+GA VK +ER +    +        DF+ R+ N L LP  V NAA  V  +++    ++GK   ++ AA +Y+V  + +  EH K++ KEI  V GVAE T++ TYR    + + ++P DF
Sbjct:   25 ANVAGAPIMIHAPGLERDLPEQCTECGSDDIVEDWKQGTLVCRGCGLVLQAEIVDLGSEWRTFTSDEPGQDPNRVGGPANPLLESGPTTKIRDELRAAG-----LNRAQKRNAISSSDRYLMDVFSKIGQIAEHFSISKVVVDRTEEIFKRYYDVLTLK-------PDG-TRSRSLPEDETNEIIAAALLIAFRDDGIARSFKEIVTLTKVPKQNIGARVKLIERDIGKSVRHAEPSSASDFIPRYCNRLSLPPSVSNAALHVYEKVRERDGVYGKQPNSIIAACLYLVCQISRDPEHRKKTPKEIGGVAGVAEATVRQTYRTVQEYTKEIVPSDF 347          
BLAST of Ggra1075.t1 vs. uniprot
Match: M1USL8 (Transcription initiation factor IIB n=2 Tax=cellular organisms TaxID=131567 RepID=M1USL8_CYAM1)

HSP 1 Score: 213 bits (541), Expect = 1.580e-62
Identity = 132/338 (39.05%), Postives = 188/338 (55.62%), Query Frame = 0
Query:   11 APPMEREMPEECPECGSDDIVENWREGTADCRGCGLIIIERLLDLGTEWRTFTSEEGD-DPNRAGPANNPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRHRDRLNLAKSVSDRALELFKRYQDHLTTKIVSTPGQPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICALTGVPKKNVGATVKKMERQLTDA-KTTYVRGTDDFVTRFGNFLDLPRDVINAADAVAGEMQNHGVLHGKTYTTLAAASIYIVTLLCKAEHKRS------------AKEIADVTGVAEVTIK---STYRQFYPHIEGVIPDDF 331
            AP MER++P+ C ECGS D+VE+ + G   C  CG++  E L+DLG EWRTF +++   DPNR G + NPLL+    TSI  G  G  AL+  L RAQ+RN   A D+ + E   RI    +R  L + V DRA EL + Y DHLT       G    R R R  RE+E   I++++LFIACRN+   R++ EI  +  V K  V A VK ME  + +A K + +R TDDFV+RF ++L++P  V +  + VA        +HG+T  ++AA +IY V LL +    +S               IA+V+G+ E  +K   S  RQ+     G++P D+
Sbjct:    3 APTMERDVPDVCGECGSTDLVEDTKNGDLVCAQCGVVAAELLIDLGHEWRTFENDDSAYDPNRVGGSINPLLDSGLATSISQGPAGANALNERLARAQSRNVLDANDRYVTECYNRISYLCERSGLPQLVKDRACELLRLYYDHLTL------GADGVRARAR-FREDETASIISAALFIACRNEGFPRTFNEISVIVSVAKSRVAAYVKAMEMSIGEAAKISRIRTTDDFVSRFCSYLEIPNIVRSLVNQVARAAAEKDGIHGRTLVSIAAGAIYFVLLLWRETCPQSIPATLRVSDEALVNRIAEVSGITEGVVKTVASRIRQYRDR--GLLPPDW 331          
BLAST of Ggra1075.t1 vs. uniprot
Match: A0A152A9B4 (Transcription initiation factor IIB n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A9B4_9MYCE)

HSP 1 Score: 203 bits (516), Expect = 2.900e-59
Identity = 123/328 (37.50%), Postives = 192/328 (58.54%), Query Frame = 0
Query:   22 CPECGSDD--IVENWREGTADCRGCGLIIIERLLDLGTEWRTFTSEE--GDDPNRAGPANNPLL-EFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRHRDRLNLAKSVSDRALELFKRYQDHLTTKIVSTPGQPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICALTG-VPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVAGEMQNHGVLHGKTYTTLAAASIYIVTLLCKAEHKRSAKEIADVTGVAEVTIKSTYRQFYPHIEGVIPDDFECAVSVSDLPQP 343
            CP C ++D  IVE++ +G   CRGCG+++ +R++D  +EWRTF++ E  G DPNR G   NPLL E    T+IG GAK  G+LS    + QNRNA  + D+ ++     IGR  DRL L +++ D+A EL++   D                   + LR +  + ++A++L++ACR     R +KEI  LT  V K ++    K M+  L+D  +     ++DF+TR+ + L LP DV  +A+ V+   Q+ G++ GK+  ++ AASIY+V+  C  E KRS KEI++++G++EVTIK+TY+  Y H E + P +      +S LP P
Sbjct:   35 CPVCKNNDPDIVEDYAKGDLICRGCGVVLGDRIIDEHSEWRTFSNSESTGADPNRVGGPTNPLLREAALSTTIGKGAKDTGSLS----KLQNRNALGSGDRNLLAAFSEIGRMVDRLGLPQTIHDKANELYRMMDDR------------------KPLRGKSADGMMAAALYMACRIDGTTRQFKEIAILTSNVTKVDISRCYKTMKDSLSDYISLQTITSEDFITRYCSELKLPLDVKKSAEHVSKTAQDMGIVSGKSPISVTAASIYMVSQ-CSTE-KRSQKEISNISGISEVTIKNTYKDLYNHRESLFPANSPFISKISSLPSP 338          
BLAST of Ggra1075.t1 vs. uniprot
Match: A9BL15 (TfIIB n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BL15_HEMAN)

HSP 1 Score: 202 bits (515), Expect = 4.820e-59
Identity = 111/318 (34.91%), Postives = 190/318 (59.75%), Query Frame = 0
Query:   20 EECPECGSDDIVENWREGTADCRGCGLIIIERLLDLGTEWRTFTSEE-GDDPNRAGPANNPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRHRDRLNLAKSVSDRALELFKRYQDHLTTKIVSTPGQPDKRVRTR-TLREEEVNEIVASSLFIACRNQKVARSYKEICALTGVPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVAGEMQNHGVLHGKTYTTLAAASIYIVTLLCKAEHKRSAKEIADVTGVAEVTIKSTYRQFYPH----IEGVIPDDF 331
            E+C +CGS++++E+ ++G   C  CGL++    +D  +EWR F  ++ G DP R G  N+PLLE   GT I  G +G   L+  L   QN++     D+ + +   +I    ++  L K + +R  ELFK Y D+LT +   + G      RTR +LR++E    +A+S+FI  RN+ + R+++EI   T VPKK +G+ V+ +ER L   K + +R T+DF++RF + L LP  +   A+ +A  ++    L+GK Y +++AASI++++ L   ++K +AKEIA V G++E+T++ T +  YP+    ++ +IP +F
Sbjct:   20 EKCTDCGSENLLEDKKQGDLICFECGLVLTSHNIDFTSEWRCFADDQRGKDPTRIGDPNHPLLESNSGTLISKGLRGANNLNERLATTQNQSNLQKTDRFLTQSFSKINLFLEKNFLFKGIKERVEELFKSYFDYLTLR---SDGS-----RTRYSLRKDETLSSIAASIFIVSRNEGIPRTFREIYETTKVPKKEIGSRVRAIERSLRGVKISKIRNTEDFISRFCSKLGLPVFISRLAEKLAKTVREKEGLYGKNYISVSAASIHVISQLSPIKNKCTAKEIAKVAGISEITLRLTQKAMYPYRDKILKTLIPPNF 329          
BLAST of Ggra1075.t1 vs. uniprot
Match: A0A075AQZ5 (Cyclin-like domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AQZ5_ROZAC)

HSP 1 Score: 199 bits (507), Expect = 3.440e-58
Identity = 116/325 (35.69%), Postives = 185/325 (56.92%), Query Frame = 0
Query:   22 CPECGSD--DIVENWREGTADCRGCGLIIIERLLDLGTEWRTFTSEEG-DDPNRAGPANNPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRHRDRLNLAKSVSDRALELFKRYQDHLTTKIVSTPGQPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICALTGVPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVAGEMQNHGVLHGKTYTTLAAASIYIVTLLCKAEHKRSAKEIADVTGVAEVTIKSTYRQFYPHIEGVIPDDFECAVSVSDLPQP 343
            CP+C +   +IVE+++ GT  CR C +++++R++D  +EWRTF+SE G DDP+R G A++PLL      ++ +   G   +S  LNR Q R A S++++ ++   + I  H DR+NL K V DRA + F+  + H                  + L+ +  N ++A+ + IAC  + VAR+YKEICA+T VPK  +    K +   LT A    V    DFV R  N L +  D+      +     +HG + GK+  +++AA IYI+TLL + +++   K I++V GV+E+TI++TYR  YPH++ +IPD     + V  LP P
Sbjct:   14 CPDCRNPHPNIVEDFKSGTLICRDCAVVLVDRIIDTRSEWRTFSSEAGKDDPSRVGGASDPLLNGTQLDTMISAQDGFSGMSKELNRVQQRTAMSSSNRALINAAKDIATHCDRMNLPKVVIDRARQYFQIAEKH------------------KLLKSKSANGMIAACILIACAQEGVARTYKEICAITRVPKVEIARCKKALLEHLTVAPK--VGKASDFVARQCNALGMGADMERLGTEIVKRASDHGCVDGKSPLSVSAAGIYILTLLYQ-KYRGIMKNISEVAGVSEMTIRNTYRDMYPHLDTIIPDTVPKEL-VQMLPSP 316          
BLAST of Ggra1075.t1 vs. uniprot
Match: TF2B (Transcription initiation factor IIB n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=TF2B_DICDI)

HSP 1 Score: 199 bits (507), Expect = 4.430e-58
Identity = 118/316 (37.34%), Postives = 182/316 (57.59%), Query Frame = 0
Query:   29 DIVENWREGTADCRGCGLIIIERLLDLGTEWRTFTSEE--GDDPNRAGPANNPLL-EFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRHRDRLNLAKSVSDRALELFKRYQDHLTTKIVSTPGQPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICALTGVPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVAGEMQNHGVLHGKTYTTLAAASIYIVTLLCKAEHKRSAKEIADVTGVAEVTIKSTYRQFYPHIEGVIPDDFECAVSVSDLP 341
            DI+E++ +G   CRGCG+++ +R++D  +EWRTF++ E  G DPNR G   NPLL +    T++G G+K  G L+    R QN++A    D+ ++   + IGR  D +NL ++V DRA ELF+   D  +TK  S  G                  +VA++L+IACR + ++R++KEI ALT VPKK +    K M+             ++DF +RF + L LP DV   A+ V+    + G++ GK+  ++ AASIY+V+ L  +  KR+ K+IADV+GV+EVTI++ Y+  Y   + +IP D      V  LP
Sbjct:   32 DIIEDYAKGDLICRGCGVVVGDRIVDEHSEWRTFSNSESTGADPNRVGGPINPLLRDSALSTTVGKGSKDSGTLT----RLQNKSALGTGDRNLLAAFKEIGRMADHMNLPQTVQDRANELFRFMDDKKSTKGRSVDG------------------MVAAALYIACRQEHLSRTFKEIAALTNVPKKEISRCYKIMKETFASVLNLQTISSEDFTSRFCSTLKLPNDVKKGAEHVSKMAMDMGIVAGKSPISVTAASIYMVSQL--SPEKRTQKQIADVSGVSEVTIRNAYKDLYAKRDQLIPSDSPYFSQVQYLP 323          
BLAST of Ggra1075.t1 vs. uniprot
Match: F4QDI6 (Transcription initiation factor IIB n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QDI6_CAVFA)

HSP 1 Score: 196 bits (499), Expect = 8.160e-57
Identity = 123/325 (37.85%), Postives = 184/325 (56.62%), Query Frame = 0
Query:   22 CPECGSDD--IVENWREGTADCRGCGLIIIERLLDLGTEWRTFTSEE--GDDPNRAGPANNPLLEFEHGTSIGTGAKGGGALSVSLNRAQNRNATSAADKVMMEVIQRIGRHRDRLNLAKSVSDRALELFKRYQDHLTTKIVSTPGQPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSYKEICALTG-VPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLPRDVINAADAVAGEMQNHGVLHGKTYTTLAAASIYIVTLLCKAEHKRSAKEIADVTGVAEVTIKSTYRQFYPHIEGVIPDDFECAVSVSDLP 341
            CP C   D  +VE++  G   CR CG +I +R++D  +EWRTF++ E  G DPNR G  NNPLL  E G S   G KG G  +  L+R QNR A  + D+ ++   + I +  D + L ++V D A ELF++  D    K  S  G                  ++A+SL++ACR   +AR++KE+CAL+  V KK +    K+M   L D  + +   TDDF+TRF + L LP DV  AAD V+    + G++ GK   ++ AA+IY+V+ L  +  KR+ K I+DV+GV+EVTI++ Y+  Y   + ++P +     +VSDLP
Sbjct:   27 CPVCKDPDPDVVEDYARGDLICRRCGCVIGDRIVDEHSEWRTFSNSESTGADPNRVGGPNNPLLR-EGGLSTVIG-KGTGKDASVLSRMQNRGALGSGDRSLLAAFKEIEKMSDHIGLPQTVQDTAKELFRQMDDRKPMKGKSADG------------------MLAASLYMACRIDGIARTFKEVCALSNNVSKKELAKCYKQMREALGDVHSLHAISTDDFMTRFCSNLSLPNDVKKAADHVSRTAIDLGIVAGKNPLSVTAAAIYLVSQL--SADKRTQKAISDVSGVSEVTIRNVYKDLYSKRDSLLPPNSPFLQNVSDLP 329          
The following BLAST results are available for this feature:
BLAST of Ggra1075.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IR246.930e-21989.61Transcription initiation factor IIB n=1 Tax=Gracil... [more]
R7QNA61.070e-15569.39TFIIB-type domain-containing protein n=1 Tax=Chond... [more]
A0A7S3EGB11.310e-8542.00Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YSQ31.140e-8144.35Transcription initiation factor IIB n=1 Tax=Porphy... [more]
M1USL81.580e-6239.05Transcription initiation factor IIB n=2 Tax=cellul... [more]
A0A152A9B42.900e-5937.50Transcription initiation factor IIB n=1 Tax=Tieghe... [more]
A9BL154.820e-5934.91TfIIB n=1 Tax=Hemiselmis andersenii TaxID=464988 R... [more]
A0A075AQZ53.440e-5835.69Cyclin-like domain-containing protein n=1 Tax=Roze... [more]
TF2B4.430e-5837.34Transcription initiation factor IIB n=1 Tax=Dictyo... [more]
F4QDI68.160e-5737.85Transcription initiation factor IIB n=1 Tax=Cavend... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000812Transcription factor TFIIBPRINTSPR00685TIFACTORIIBcoord: 210..225
score: 32.08
coord: 56..69
score: 44.29
coord: 69..90
score: 30.0
coord: 34..54
score: 33.97
coord: 307..321
score: 45.33
coord: 184..203
score: 48.33
coord: 239..257
score: 40.0
IPR000812Transcription factor TFIIBPANTHERPTHR11618TRANSCRIPTION INITIATION FACTOR IIB-RELATEDcoord: 21..327
IPR013137Zinc finger, TFIIB-typePFAMPF08271TF_Zn_Ribboncoord: 22..62
e-value: 5.3E-9
score: 35.4
IPR013137Zinc finger, TFIIB-typePROSITEPS51134ZF_TFIIBcoord: 18..49
score: 8.546022
NoneNo IPR availableGENE3D1.10.472.170coord: 21..225
e-value: 7.2E-44
score: 152.0
NoneNo IPR availableGENE3D1.10.472.10coord: 235..342
e-value: 1.6E-22
score: 81.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..89
NoneNo IPR availablePANTHERPTHR11618:SF13TRANSCRIPTION INITIATION FACTOR IIBcoord: 21..327
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 19..65
IPR013150Transcription factor TFIIB, cyclin-like domainPFAMPF00382TFIIBcoord: 179..223
e-value: 6.0E-8
score: 32.6
coord: 236..321
e-value: 2.0E-17
score: 62.9
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 123..225
e-value: 6.5729E-5
score: 39.1441
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 238..320
e-value: 2.87909E-4
score: 37.2181
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 122..225
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 237..342

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000868_piloncontigtig00000868_pilon:114000..115031 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1075.t1Ggra1075.t1Gracilaria gracilis GNS1m malemRNAtig00000868_pilon 114000..115031 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1075.t1 ID=Ggra1075.t1|Name=Ggra1075.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=344bp
MASFNGMPSLAPPMEREMPEECPECGSDDIVENWREGTADCRGCGLIIIE
RLLDLGTEWRTFTSEEGDDPNRAGPANNPLLEFEHGTSIGTGAKGGGALS
VSLNRAQNRNATSAADKVMMEVIQRIGRHRDRLNLAKSVSDRALELFKRY
QDHLTTKIVSTPGQPDKRVRTRTLREEEVNEIVASSLFIACRNQKVARSY
KEICALTGVPKKNVGATVKKMERQLTDAKTTYVRGTDDFVTRFGNFLDLP
RDVINAADAVAGEMQNHGVLHGKTYTTLAAASIYIVTLLCKAEHKRSAKE
IADVTGVAEVTIKSTYRQFYPHIEGVIPDDFECAVSVSDLPQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000812TFIIB
IPR013137Znf_TFIIB
IPR013150TFIIB_cyclin
IPR013763Cyclin-like
IPR036915Cyclin-like_sf