Ggra1053.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1053.t2
Unique NameGgra1053.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length396
Homology
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A2V3IIT0 (Retinoblastoma-associated protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIT0_9FLOR)

HSP 1 Score: 385 bits (989), Expect = 3.240e-126
Identity = 201/336 (59.82%), Postives = 241/336 (71.73%), Query Frame = 0
Query:   33 LRKVTGGGRPLLAIIDVGRRFSAALCTVLRDTNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRLDLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHY 368
            +R + G  RPL A+ID+GRR+S ALC VL++ N   + R  LAVYF A+EGIL+KE RRLS Q  KF + VL N +LHKSFLTFAWETTAAA+G++DL VF VAYRAF+VSPFELTKALD FC LVPQMPR LV+H++ CDARILEWMAWR  SPLV VLQAY RD +  Q  +  ++   SP+             + ++   +S V P+   G          E      +   L+EME+PER+Y D +AR RVLDFF+EKVFALAGTRTEELLRRL+L  LR  VWRSIK+ LWCRWNLVINRHVDLII+CVIYGVAKVQH++LRFR IV  Y
Sbjct:    1 MRTLAGSPRPLKAVIDLGRRYSDALCNVLKEFNVPHYKRAALAVYFYAIEGILQKEHRRLSNQLHKFSAKVLQNAILHKSFLTFAWETTAAAYGKKDLNVFTVAYRAFNVSPFELTKALDAFCTLVPQMPRSLVNHMINCDARILEWMAWRHDSPLVNVLQAYGRDRLRMQQSSGQASAPGSPQ-------------TPQHRNSSSDVQPSSSGGL---------EQSASTEAPSPLREMERPERLYSDVEARVRVLDFFYEKVFALAGTRTEELLRRLNLTCLRKPVWRSIKYCLWCRWNLVINRHVDLIIMCVIYGVAKVQHLRLRFREIVHEY 314          
BLAST of Ggra1053.t2 vs. uniprot
Match: R7QJ10 (Similar to Retinoblastoma-associated protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ10_CHOCR)

HSP 1 Score: 182 bits (463), Expect = 7.050e-48
Identity = 126/369 (34.15%), Postives = 184/369 (49.86%), Query Frame = 0
Query:    3 WITTLTASRPETNSES-CLTCPLEQVSTTDGLRKVTGGGRPLLAIIDVGRRFSAALCTVLRDTNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEK--FLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRLDLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHY 368
            W+  L   RPET  E     C  + + TTD + +V       L I++  R  S  L     D       RE +AV+FAA E IL +E  RL  + EK   + N+     +HKS L  +WE T+A++GRRDL VF  A  AF++  F++ K ++ F  L P MPR L  H+  C  R+LE MAW   S LV+ L+A  R L                 EV     T Q SE+ ++   A+  +  +E             A  +D   P             ++  R   L+FFF+K+ ++A  R +ELL RL +  +   VW +IK A+W +W+L+++RH+D II+C IYGVAKV   +L+FR I++ Y
Sbjct:   66 WLKKLAQERPETEDEDHFFDCTSKDMPTTDAMMRVLKTDDVWLNIVNTTRALSDKLAEKTPDLAGPDRKREAMAVFFAAFESILLREDARLKAKKEKPWVIDNLGRATSIHKSLLLCSWEITSASYGRRDLTVFNAAIEAFEIPAFDILKIIEPFARL-PDMPRPLASHINLCGVRVLECMAWTPGSKLVKNLRA--RSL-----------------EVASKKSTKQASENGKDTNGAAAASKEEE-------------ANKQDPPVP-------------ENATREFALEFFFKKLLSVASDRAQELLIRLGMDLIAEPVWAAIKHAVWEKWHLMVDRHIDQIIMCCIYGVAKVGMYELKFRDIIQAY 388          
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A7S3A3H1 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3H1_9RHOD)

HSP 1 Score: 126 bits (317), Expect = 6.260e-28
Identity = 99/330 (30.00%), Postives = 156/330 (47.27%), Query Frame = 0
Query:   65 NSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQ--ASPVTPAQERGASVDEDEVKGEAEVEDSS--TPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRLDLVHLRSQ-VWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQH--IQLRFRTIVRHYHSPGPHERSNVPIQFAIGI 387
             +++ +RE  AVYFA++EGIL  E++RL       L  + HN   H + L  + ET + A+GRR+   F      FD+ PF+LTK +++F    P +P+ +  HL+ C+ RILE +AW   S LV+ L+        +      S Q  +     G+ D    S+ +E+  +   +P  P    G            +V +S+   PK   +E PE            LD FF K+  +   R + L  R  L   + + VW + K+ +  +W L+I RH+D +I+C +YGVAK+      ++F  I R Y    PH R     Q+   I
Sbjct:  450 TANQKIRETTAVYFASLEGILRAEEKRLKTSN---LDALAHNGTFHCALLAISCETASVAYGRREFAPFPKILDDFDIEPFDLTKVVESFIKHTPGLPKAIGRHLLRCEERILEKLAWMPGSALVRSLEIREEKYRGESGSADDSQQSDTGNFSQGTVDLISSSQLSESVHENRGTPTIPCVGNGTH----------DVTESAGIVPKPF-VEVPEA----------ALDIFFRKLLFVGSARLQALSTRAGLSSAQVENVWSAFKYIVSEKWRLIIGRHLDQMIMCCVYGVAKLSQETSSMKFSDITRWYEML-PHTREESFKQYVSSI 754          
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A7S0BJ67 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BJ67_9RHOD)

HSP 1 Score: 124 bits (310), Expect = 2.770e-27
Identity = 99/357 (27.73%), Postives = 163/357 (45.66%), Query Frame = 0
Query:   52 RFSAALCTVLRD----TNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARV--------------LDFFFEKVFALAGTRTEELLRRLDLVHLRSQ-VWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQH--IQLRFRTIVRHYHSPGPHERSNVPIQFAIGI 387
            R    LCT  R       +++ +RE  AVYF+++EGI+  E++RL       L  +++N   H++ L  + ET + A+GRRD   F       D+ PF++TK +++F    P +P+ +  HL+ C+ RILE +AW   S LV  L+    +    +N +A  +Q++         DT   S+   +   +S ++                E+  E+  T  +     P    G HDA                  LD FF K+  L   R + L  R  L  ++ +  W ++K+ L  +W L++ RH+D +I+C +YGVAK+      ++F  I R Y    PH R     Q+   I
Sbjct:  184 RAQKMLCTYWRKHYGTITANQKIRETTAVYFSSLEGIMLAEEKRLKTSN---LDALVNNGTFHRALLAISCETASVAYGRRDFAPFPKILDDLDIEPFDMTKVVESFIKHTPSLPKAVGRHLLRCEERILEKLAWMPGSALVGSLEI-REEKYRGENGSANDSQQS---------DTCNFSQGTVDLISSSQLS----------------ESVHENGRTAAI-----PSVGNGSHDATESAGVVPKPFVEVPEAALDIFFRKLLFLGSGRLQALSTRAGLSSIQVENAWSALKYILSEKWKLLVGRHLDQMIMCCVYGVAKLSQETSSMKFSDITRWYEVL-PHTREESFKQYVSSI 505          
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A8D2INS4 (RB transcriptional corepressor 1 n=6 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2INS4_VARKO)

HSP 1 Score: 105 bits (262), Expect = 7.800e-21
Identity = 91/311 (29.26%), Postives = 139/311 (44.69%), Query Frame = 0
Query:   76 VYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHG-------------RRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDE--DEVKG-EAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRL--DLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHY 368
            +Y+  ME IL+ E++RLS       S +L+N + H S L  A E   A +G               DL  F       D+  F+L K +++F  + P + R ++ HL CC+ +I+E +AWRS SPL         DLI Q       T  + P               A  F Q     P Q    + D     +K  + +V  SS     E +           ++  L  F++KV+ LA  R  +L  RL  D   L+  +W  +   L   + L+ +RH+D I++C +YG+ KV++I LRF+TIV  Y
Sbjct:  460 LYYRVMESILKSEEKRLSIHN---FSKLLNNGIFHTSLLACALEVVIATYGISRNTSQSNNMTMETDLS-FPWIINILDLKAFDLYKVIESFIKVEPSLTREMIKHLECCEHQIMESLAWRSDSPLF--------DLIKQSKEQDGQTDHSEP---------------ANCFIQ-----PLQHNHTAADLYLSPIKSPKKKVSSSSVYSFPETQSTLVNQSQKSYKSTSLSLFYKKVYWLAYMRLNDLCLRLLSDHPELKHFIWTLLDHTLQNEYELMKDRHLDQILMCSMYGICKVKNIDLRFKTIVTAY 738          
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A8D0KMR8 (RB transcriptional corepressor 1 n=2 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0KMR8_9SAUR)

HSP 1 Score: 100 bits (248), Expect = 4.780e-19
Identity = 93/344 (27.03%), Postives = 149/344 (43.31%), Query Frame = 0
Query:   52 RFSAALCTVLRDTNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGR------------RDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVL-QAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQA------------SPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRL--DLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHY 368
            +F+ A+     +  S R+ R  + +Y+  ME IL+ E++RLS       S +L+N   H S L  A E   A +G               +  F       ++  F+L K +++F    P + R ++ HL CC+ RI+E +AW+S SPL +++ Q+  RD   +Q                         E A NFAQ             SP    ++R        V        S +  + + +KP         ++  L  F++KV  LA  R + L  RL  D   L   +W      L   + L+ +RH+D I++C +YG+ KV++I LRF+TIV  Y
Sbjct:  423 KFAEAVGQGCAEIGSQRY-RLGVRLYYRVMESILKSEEKRLSIHN---FSKLLNNNAFHTSLLACALEVVIATYGTSRSASQNDSLNTETVLSFPWIINTLNLKAFDLYKVIESFIKAEPNLSREMIKHLECCEHRIMESLAWKSDSPLFELIKQSKERDGQSEQL------------------------EHASNFAQPLQHNHSAAELYISPTKSPKKR--------VPSSLACPPSDSQSVNQAQKP--------YKSTSLSLFYKKVHWLAYMRLKNLCLRLLSDHPELEHMIWTLFHHTLQNEYELMKDRHLDQIMMCSMYGMCKVKNIDLRFKTIVTAY 722          
BLAST of Ggra1053.t2 vs. uniprot
Match: Q98966 (Retinoblastoma protein n=1 Tax=Notophthalmus viridescens TaxID=8316 RepID=Q98966_NOTVI)

HSP 1 Score: 96.3 bits (238), Expect = 8.880e-18
Identity = 81/298 (27.18%), Postives = 134/298 (44.97%), Query Frame = 0
Query:   78 FAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHG----RRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVL-QAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRL--DLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHY 368
            +  ME +L+ E++RLS Q     SN+L+N   H+S L  + E   A +G      DL  F      F + P++  K +++F    P + R ++ HL  C+ RI+E +AWRS+SP+ +++ Q   R+  + Q     S  +        +D               SP+   +          V     +   S P+   +  P         R+  L  F++KV+ LA  R   L  +L  D   L   +W   +  L   + L+ +RH+D I++C +Y + KV+ I LRF+TIV  Y
Sbjct:  434 YRVMEAMLKSEEKRLSVQN---FSNLLNNSAFHESLLACSIEVVMATYGSISRETDLS-FPWILEVFKIEPYDFYKVIESFIKDEPSLTREMIKHLESCEHRIMESLAWRSESPIYELIRQPREREGHVDQPEPTSSLNQPLEHNHTAAD------------LYLSPLRSPRRN--------VPTSRAIPTLSVPESNNVPAP---LPQPTQRSTSLSLFYKKVYRLAYLRMNTLCSKLLPDHPELEHVIWTLFQHTLQNEYELMKDRHLDQIMMCSMYAICKVKAIDLRFKTIVTAY 704          
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A3B3T0B6 (RB transcriptional corepressor 1 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3T0B6_9TELE)

HSP 1 Score: 94.7 bits (234), Expect = 2.880e-17
Identity = 81/315 (25.71%), Postives = 137/315 (43.49%), Query Frame = 0
Query:   76 VYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHG------------------RRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRL--DLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHYHS 370
            +Y+  ME +L+ E++RLS Q     S +L+N   H S L  A E   A +G                    DL  F      F +S F+  K +++F    P + R ++ HL  C+  ++E +AWRS SPL ++L+    + +++Q   + +  +        +D               SPV P+   G              +  ++P L     P        +++  L  F+ KV+ LA  R   L  RL  D   L   +W  ++  L   + L+ +RH+D +++  +Y + KV++I LRF+TIV  Y S
Sbjct:  441 LYYRVMESMLKSEEKRLSVQN---FSILLNNSAFHISLLACALEVVMATYGGSTFKNGSACSDGDGGGTESDLS-FPWILDVFQLSAFDFYKVIESFIKAEPSLSRDMIKHLERCEHLVMERIAWRSDSPLFELLRRSQEECLVEQAEPSATLNQPLQHNHTAAD------------LYLSPVRPSSRIGP------------PDFHASPSL-----PASCPSASQSKSISLSLFYRKVYRLAYLRLNTLCSRLLKDQADLEPVMWTLLQHTLQYEYELMKDRHLDQLMMSAMYAICKVKNIDLRFKTIVTAYKS 722          
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A4X1SJ47 (RB transcriptional corepressor 1 n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A4X1SJ47_PIG)

HSP 1 Score: 93.2 bits (230), Expect = 9.200e-17
Identity = 93/341 (27.27%), Postives = 158/341 (46.33%), Query Frame = 0
Query:   43 LLAIIDVG----RRFSAALCTVLRDTNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQ--------VFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQ-QNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRL--DLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHY 368
            L  + D+G     +F+ A+     +  S R+   V  +Y+  ME +L+ E+ RLS Q     S +L++ + H S L  A E   A + R   Q         F       ++  F+  K +++F      + R ++ HL  C+ RI+E +AWRS SPL         DLI Q ++R  P+    S   ++      Q + +A +    SP+   +++G++     V   A  E  +T    + +KP         ++  L  F++KV+ LA  R   L  RL  D   L   +W   +  L   + L+ +RH+D I++C +YG+ KV++I L+F+ IV  Y
Sbjct:  385 LKRVKDIGYIFKEQFAKAVGQGCMEIGSQRYKLGV-RLYYRVMESMLKSEEERLSIQN---FSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWRSDSPLF--------DLIKQAKDREGPADHLESACTLINL--PLQSNHTAADMY-LSPLRSPKKKGSTT---RVNSTANSEAQATSTF-QTQKP--------LKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAY 698          
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A8D1QCK4 (RB transcriptional corepressor 1 n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1QCK4_PIG)

HSP 1 Score: 93.2 bits (230), Expect = 9.330e-17
Identity = 93/341 (27.27%), Postives = 158/341 (46.33%), Query Frame = 0
Query:   43 LLAIIDVG----RRFSAALCTVLRDTNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQ--------VFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQ-QNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRL--DLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHY 368
            L  + D+G     +F+ A+     +  S R+   V  +Y+  ME +L+ E+ RLS Q     S +L++ + H S L  A E   A + R   Q         F       ++  F+  K +++F      + R ++ HL  C+ RI+E +AWRS SPL         DLI Q ++R  P+    S   ++      Q + +A +    SP+   +++G++     V   A  E  +T    + +KP         ++  L  F++KV+ LA  R   L  RL  D   L   +W   +  L   + L+ +RH+D I++C +YG+ KV++I L+F+ IV  Y
Sbjct:  412 LKRVKDIGYIFKEQFAKAVGQGCMEIGSQRYKLGV-RLYYRVMESMLKSEEERLSIQN---FSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWRSDSPLF--------DLIKQAKDREGPADHLESACTLINL--PLQSNHTAADMY-LSPLRSPKKKGSTT---RVNSTANSEAQATSTF-QTQKP--------LKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAY 725          
The following BLAST results are available for this feature:
BLAST of Ggra1053.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIT03.240e-12659.82Retinoblastoma-associated protein n=1 Tax=Gracilar... [more]
R7QJ107.050e-4834.15Similar to Retinoblastoma-associated protein n=1 T... [more]
A0A7S3A3H16.260e-2830.00Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7S0BJ672.770e-2727.73Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A8D2INS47.800e-2129.26RB transcriptional corepressor 1 n=6 Tax=Varanus k... [more]
A0A8D0KMR84.780e-1927.03RB transcriptional corepressor 1 n=2 Tax=Salvator ... [more]
Q989668.880e-1827.18Retinoblastoma protein n=1 Tax=Notophthalmus virid... [more]
A0A3B3T0B62.880e-1725.71RB transcriptional corepressor 1 n=2 Tax=Paramormy... [more]
A0A4X1SJ479.200e-1727.27RB transcriptional corepressor 1 n=1 Tax=Sus scrof... [more]
A0A8D1QCK49.330e-1727.27RB transcriptional corepressor 1 n=1 Tax=Sus scrof... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002720Retinoblastoma-associated protein, A-boxSMARTSM01368RB_A_2coord: 5..192
e-value: 2.2E-8
score: 33.9
IPR002720Retinoblastoma-associated protein, A-boxPFAMPF01858RB_Acoord: 63..191
e-value: 4.9E-22
score: 78.8
NoneNo IPR availableGENE3D1.10.472.10coord: 16..182
e-value: 7.2E-20
score: 73.6
NoneNo IPR availableGENE3D1.10.472.10coord: 254..392
e-value: 3.0E-24
score: 87.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..277
IPR002719Retinoblastoma-associated protein, B-boxPFAMPF01857RB_Bcoord: 289..380
e-value: 8.7E-19
score: 67.9
IPR028309Retinoblastoma protein familyPANTHERPTHR13742RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATEDcoord: 64..370
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 65..195
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 290..379

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000868_piloncontigtig00000868_pilon:7091..8278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1053.t2Ggra1053.t2Gracilaria gracilis GNS1m malemRNAtig00000868_pilon 7091..8278 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1053.t2 ID=Ggra1053.t2|Name=Ggra1053.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=396bp
MRWITTLTASRPETNSESCLTCPLEQVSTTDGLRKVTGGGRPLLAIIDVG
RRFSAALCTVLRDTNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFL
SNVLHNYVLHKSFLTFAWETTAAAHGRRDLQVFAVAYRAFDVSPFELTKA
LDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLI
MQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASV
DEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALA
GTRTEELLRRLDLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYG
VAKVQHIQLRFRTIVRHYHSPGPHERSNVPIQFAIGIGDSQHQPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002720RB_A
IPR002719RB_B
IPR028309RB_fam
IPR036915Cyclin-like_sf