Ggra1053.t2 (polypeptide) Gracilaria gracilis GNS1m male
Overview
Homology
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A2V3IIT0 (Retinoblastoma-associated protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIT0_9FLOR) HSP 1 Score: 385 bits (989), Expect = 3.240e-126 Identity = 201/336 (59.82%), Postives = 241/336 (71.73%), Query Frame = 0 Query: 33 LRKVTGGGRPLLAIIDVGRRFSAALCTVLRDTNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRLDLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHY 368 +R + G RPL A+ID+GRR+S ALC VL++ N + R LAVYF A+EGIL+KE RRLS Q KF + VL N +LHKSFLTFAWETTAAA+G++DL VF VAYRAF+VSPFELTKALD FC LVPQMPR LV+H++ CDARILEWMAWR SPLV VLQAY RD + Q + ++ SP+ + ++ +S V P+ G E + L+EME+PER+Y D +AR RVLDFF+EKVFALAGTRTEELLRRL+L LR VWRSIK+ LWCRWNLVINRHVDLII+CVIYGVAKVQH++LRFR IV Y Sbjct: 1 MRTLAGSPRPLKAVIDLGRRYSDALCNVLKEFNVPHYKRAALAVYFYAIEGILQKEHRRLSNQLHKFSAKVLQNAILHKSFLTFAWETTAAAYGKKDLNVFTVAYRAFNVSPFELTKALDAFCTLVPQMPRSLVNHMINCDARILEWMAWRHDSPLVNVLQAYGRDRLRMQQSSGQASAPGSPQ-------------TPQHRNSSSDVQPSSSGGL---------EQSASTEAPSPLREMERPERLYSDVEARVRVLDFFYEKVFALAGTRTEELLRRLNLTCLRKPVWRSIKYCLWCRWNLVINRHVDLIIMCVIYGVAKVQHLRLRFREIVHEY 314
BLAST of Ggra1053.t2 vs. uniprot
Match: R7QJ10 (Similar to Retinoblastoma-associated protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ10_CHOCR) HSP 1 Score: 182 bits (463), Expect = 7.050e-48 Identity = 126/369 (34.15%), Postives = 184/369 (49.86%), Query Frame = 0 Query: 3 WITTLTASRPETNSES-CLTCPLEQVSTTDGLRKVTGGGRPLLAIIDVGRRFSAALCTVLRDTNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEK--FLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRLDLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHY 368 W+ L RPET E C + + TTD + +V L I++ R S L D RE +AV+FAA E IL +E RL + EK + N+ +HKS L +WE T+A++GRRDL VF A AF++ F++ K ++ F L P MPR L H+ C R+LE MAW S LV+ L+A R L EV T Q SE+ ++ A+ + +E A +D P ++ R L+FFF+K+ ++A R +ELL RL + + VW +IK A+W +W+L+++RH+D II+C IYGVAKV +L+FR I++ Y Sbjct: 66 WLKKLAQERPETEDEDHFFDCTSKDMPTTDAMMRVLKTDDVWLNIVNTTRALSDKLAEKTPDLAGPDRKREAMAVFFAAFESILLREDARLKAKKEKPWVIDNLGRATSIHKSLLLCSWEITSASYGRRDLTVFNAAIEAFEIPAFDILKIIEPFARL-PDMPRPLASHINLCGVRVLECMAWTPGSKLVKNLRA--RSL-----------------EVASKKSTKQASENGKDTNGAAAASKEEE-------------ANKQDPPVP-------------ENATREFALEFFFKKLLSVASDRAQELLIRLGMDLIAEPVWAAIKHAVWEKWHLMVDRHIDQIIMCCIYGVAKVGMYELKFRDIIQAY 388
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A7S3A3H1 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3H1_9RHOD) HSP 1 Score: 126 bits (317), Expect = 6.260e-28 Identity = 99/330 (30.00%), Postives = 156/330 (47.27%), Query Frame = 0 Query: 65 NSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQ--ASPVTPAQERGASVDEDEVKGEAEVEDSS--TPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRLDLVHLRSQ-VWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQH--IQLRFRTIVRHYHSPGPHERSNVPIQFAIGI 387 +++ +RE AVYFA++EGIL E++RL L + HN H + L + ET + A+GRR+ F FD+ PF+LTK +++F P +P+ + HL+ C+ RILE +AW S LV+ L+ + S Q + G+ D S+ +E+ + +P P G +V +S+ PK +E PE LD FF K+ + R + L R L + + VW + K+ + +W L+I RH+D +I+C +YGVAK+ ++F I R Y PH R Q+ I Sbjct: 450 TANQKIRETTAVYFASLEGILRAEEKRLKTSN---LDALAHNGTFHCALLAISCETASVAYGRREFAPFPKILDDFDIEPFDLTKVVESFIKHTPGLPKAIGRHLLRCEERILEKLAWMPGSALVRSLEIREEKYRGESGSADDSQQSDTGNFSQGTVDLISSSQLSESVHENRGTPTIPCVGNGTH----------DVTESAGIVPKPF-VEVPEA----------ALDIFFRKLLFVGSARLQALSTRAGLSSAQVENVWSAFKYIVSEKWRLIIGRHLDQMIMCCVYGVAKLSQETSSMKFSDITRWYEML-PHTREESFKQYVSSI 754
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A7S0BJ67 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BJ67_9RHOD) HSP 1 Score: 124 bits (310), Expect = 2.770e-27 Identity = 99/357 (27.73%), Postives = 163/357 (45.66%), Query Frame = 0 Query: 52 RFSAALCTVLRD----TNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARV--------------LDFFFEKVFALAGTRTEELLRRLDLVHLRSQ-VWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQH--IQLRFRTIVRHYHSPGPHERSNVPIQFAIGI 387 R LCT R +++ +RE AVYF+++EGI+ E++RL L +++N H++ L + ET + A+GRRD F D+ PF++TK +++F P +P+ + HL+ C+ RILE +AW S LV L+ + +N +A +Q++ DT S+ + +S ++ E+ E+ T + P G HDA LD FF K+ L R + L R L ++ + W ++K+ L +W L++ RH+D +I+C +YGVAK+ ++F I R Y PH R Q+ I Sbjct: 184 RAQKMLCTYWRKHYGTITANQKIRETTAVYFSSLEGIMLAEEKRLKTSN---LDALVNNGTFHRALLAISCETASVAYGRRDFAPFPKILDDLDIEPFDMTKVVESFIKHTPSLPKAVGRHLLRCEERILEKLAWMPGSALVGSLEI-REEKYRGENGSANDSQQS---------DTCNFSQGTVDLISSSQLS----------------ESVHENGRTAAI-----PSVGNGSHDATESAGVVPKPFVEVPEAALDIFFRKLLFLGSGRLQALSTRAGLSSIQVENAWSALKYILSEKWKLLVGRHLDQMIMCCVYGVAKLSQETSSMKFSDITRWYEVL-PHTREESFKQYVSSI 505
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A8D2INS4 (RB transcriptional corepressor 1 n=6 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2INS4_VARKO) HSP 1 Score: 105 bits (262), Expect = 7.800e-21 Identity = 91/311 (29.26%), Postives = 139/311 (44.69%), Query Frame = 0 Query: 76 VYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHG-------------RRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDE--DEVKG-EAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRL--DLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHY 368 +Y+ ME IL+ E++RLS S +L+N + H S L A E A +G DL F D+ F+L K +++F + P + R ++ HL CC+ +I+E +AWRS SPL DLI Q T + P A F Q P Q + D +K + +V SS E + ++ L F++KV+ LA R +L RL D L+ +W + L + L+ +RH+D I++C +YG+ KV++I LRF+TIV Y Sbjct: 460 LYYRVMESILKSEEKRLSIHN---FSKLLNNGIFHTSLLACALEVVIATYGISRNTSQSNNMTMETDLS-FPWIINILDLKAFDLYKVIESFIKVEPSLTREMIKHLECCEHQIMESLAWRSDSPLF--------DLIKQSKEQDGQTDHSEP---------------ANCFIQ-----PLQHNHTAADLYLSPIKSPKKKVSSSSVYSFPETQSTLVNQSQKSYKSTSLSLFYKKVYWLAYMRLNDLCLRLLSDHPELKHFIWTLLDHTLQNEYELMKDRHLDQILMCSMYGICKVKNIDLRFKTIVTAY 738
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A8D0KMR8 (RB transcriptional corepressor 1 n=2 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0KMR8_9SAUR) HSP 1 Score: 100 bits (248), Expect = 4.780e-19 Identity = 93/344 (27.03%), Postives = 149/344 (43.31%), Query Frame = 0 Query: 52 RFSAALCTVLRDTNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGR------------RDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVL-QAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQA------------SPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRL--DLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHY 368 +F+ A+ + S R+ R + +Y+ ME IL+ E++RLS S +L+N H S L A E A +G + F ++ F+L K +++F P + R ++ HL CC+ RI+E +AW+S SPL +++ Q+ RD +Q E A NFAQ SP ++R V S + + + +KP ++ L F++KV LA R + L RL D L +W L + L+ +RH+D I++C +YG+ KV++I LRF+TIV Y Sbjct: 423 KFAEAVGQGCAEIGSQRY-RLGVRLYYRVMESILKSEEKRLSIHN---FSKLLNNNAFHTSLLACALEVVIATYGTSRSASQNDSLNTETVLSFPWIINTLNLKAFDLYKVIESFIKAEPNLSREMIKHLECCEHRIMESLAWKSDSPLFELIKQSKERDGQSEQL------------------------EHASNFAQPLQHNHSAAELYISPTKSPKKR--------VPSSLACPPSDSQSVNQAQKP--------YKSTSLSLFYKKVHWLAYMRLKNLCLRLLSDHPELEHMIWTLFHHTLQNEYELMKDRHLDQIMMCSMYGMCKVKNIDLRFKTIVTAY 722
BLAST of Ggra1053.t2 vs. uniprot
Match: Q98966 (Retinoblastoma protein n=1 Tax=Notophthalmus viridescens TaxID=8316 RepID=Q98966_NOTVI) HSP 1 Score: 96.3 bits (238), Expect = 8.880e-18 Identity = 81/298 (27.18%), Postives = 134/298 (44.97%), Query Frame = 0 Query: 78 FAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHG----RRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVL-QAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRL--DLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHY 368 + ME +L+ E++RLS Q SN+L+N H+S L + E A +G DL F F + P++ K +++F P + R ++ HL C+ RI+E +AWRS+SP+ +++ Q R+ + Q S + +D SP+ + V + S P+ + P R+ L F++KV+ LA R L +L D L +W + L + L+ +RH+D I++C +Y + KV+ I LRF+TIV Y Sbjct: 434 YRVMEAMLKSEEKRLSVQN---FSNLLNNSAFHESLLACSIEVVMATYGSISRETDLS-FPWILEVFKIEPYDFYKVIESFIKDEPSLTREMIKHLESCEHRIMESLAWRSESPIYELIRQPREREGHVDQPEPTSSLNQPLEHNHTAAD------------LYLSPLRSPRRN--------VPTSRAIPTLSVPESNNVPAP---LPQPTQRSTSLSLFYKKVYRLAYLRMNTLCSKLLPDHPELEHVIWTLFQHTLQNEYELMKDRHLDQIMMCSMYAICKVKAIDLRFKTIVTAY 704
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A3B3T0B6 (RB transcriptional corepressor 1 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3T0B6_9TELE) HSP 1 Score: 94.7 bits (234), Expect = 2.880e-17 Identity = 81/315 (25.71%), Postives = 137/315 (43.49%), Query Frame = 0 Query: 76 VYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHG------------------RRDLQVFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQQNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRL--DLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHYHS 370 +Y+ ME +L+ E++RLS Q S +L+N H S L A E A +G DL F F +S F+ K +++F P + R ++ HL C+ ++E +AWRS SPL ++L+ + +++Q + + + +D SPV P+ G + ++P L P +++ L F+ KV+ LA R L RL D L +W ++ L + L+ +RH+D +++ +Y + KV++I LRF+TIV Y S Sbjct: 441 LYYRVMESMLKSEEKRLSVQN---FSILLNNSAFHISLLACALEVVMATYGGSTFKNGSACSDGDGGGTESDLS-FPWILDVFQLSAFDFYKVIESFIKAEPSLSRDMIKHLERCEHLVMERIAWRSDSPLFELLRRSQEECLVEQAEPSATLNQPLQHNHTAAD------------LYLSPVRPSSRIGP------------PDFHASPSL-----PASCPSASQSKSISLSLFYRKVYRLAYLRLNTLCSRLLKDQADLEPVMWTLLQHTLQYEYELMKDRHLDQLMMSAMYAICKVKNIDLRFKTIVTAYKS 722
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A4X1SJ47 (RB transcriptional corepressor 1 n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A4X1SJ47_PIG) HSP 1 Score: 93.2 bits (230), Expect = 9.200e-17 Identity = 93/341 (27.27%), Postives = 158/341 (46.33%), Query Frame = 0 Query: 43 LLAIIDVG----RRFSAALCTVLRDTNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQ--------VFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQ-QNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRL--DLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHY 368 L + D+G +F+ A+ + S R+ V +Y+ ME +L+ E+ RLS Q S +L++ + H S L A E A + R Q F ++ F+ K +++F + R ++ HL C+ RI+E +AWRS SPL DLI Q ++R P+ S ++ Q + +A + SP+ +++G++ V A E +T + +KP ++ L F++KV+ LA R L RL D L +W + L + L+ +RH+D I++C +YG+ KV++I L+F+ IV Y Sbjct: 385 LKRVKDIGYIFKEQFAKAVGQGCMEIGSQRYKLGV-RLYYRVMESMLKSEEERLSIQN---FSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWRSDSPLF--------DLIKQAKDREGPADHLESACTLINL--PLQSNHTAADMY-LSPLRSPKKKGSTT---RVNSTANSEAQATSTF-QTQKP--------LKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAY 698
BLAST of Ggra1053.t2 vs. uniprot
Match: A0A8D1QCK4 (RB transcriptional corepressor 1 n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1QCK4_PIG) HSP 1 Score: 93.2 bits (230), Expect = 9.330e-17 Identity = 93/341 (27.27%), Postives = 158/341 (46.33%), Query Frame = 0 Query: 43 LLAIIDVG----RRFSAALCTVLRDTNSDRHVREVLAVYFAAMEGILEKEKRRLSQQPEKFLSNVLHNYVLHKSFLTFAWETTAAAHGRRDLQ--------VFAVAYRAFDVSPFELTKALDTFCMLVPQMPRCLVHHLVCCDARILEWMAWRSKSPLVQVLQAYNRDLIMQ-QNRTAPSTQEASPEEVVGSDDTAQGSESAENFAQASPVTPAQERGASVDEDEVKGEAEVEDSSTPKLKEMEKPERMYGDHDARARVLDFFFEKVFALAGTRTEELLRRL--DLVHLRSQVWRSIKFALWCRWNLVINRHVDLIILCVIYGVAKVQHIQLRFRTIVRHY 368 L + D+G +F+ A+ + S R+ V +Y+ ME +L+ E+ RLS Q S +L++ + H S L A E A + R Q F ++ F+ K +++F + R ++ HL C+ RI+E +AWRS SPL DLI Q ++R P+ S ++ Q + +A + SP+ +++G++ V A E +T + +KP ++ L F++KV+ LA R L RL D L +W + L + L+ +RH+D I++C +YG+ KV++I L+F+ IV Y Sbjct: 412 LKRVKDIGYIFKEQFAKAVGQGCMEIGSQRYKLGV-RLYYRVMESMLKSEEERLSIQN---FSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWRSDSPLF--------DLIKQAKDREGPADHLESACTLINL--PLQSNHTAADMY-LSPLRSPKKKGSTT---RVNSTANSEAQATSTF-QTQKP--------LKSTSLSLFYKKVYRLAYLRLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAY 725 The following BLAST results are available for this feature:
BLAST of Ggra1053.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra1053.t2 ID=Ggra1053.t2|Name=Ggra1053.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=396bpback to top |