Ggra1074.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1074.t1
Unique NameGgra1074.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1062
Homology
BLAST of Ggra1074.t1 vs. uniprot
Match: A0A2V3IR22 (GLTSCR1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR22_9FLOR)

HSP 1 Score: 575 bits (1483), Expect = 8.020e-186
Identity = 404/866 (46.65%), Postives = 528/866 (60.97%), Query Frame = 0
Query:  226 GDPRLAKFDAATLEQVLRGTTDPQIFATLSKQLNFLRSNAASSNLQTQQMHNSASPFSTQVNTRARHAPLASSQPNLQMGASPNVSQSALLQRQQXXXXXXXXXXXXXNQRHSPAHHSNTLSSFPFNTTASQDHLTASLTQNIGNLPPHIQHLQAQXXXXXXXXXXXLHMHKSKANSSXXXXXXXXXXXXXXXXXXXXNKRPPRHSPKGTTIAVSDINGVASSTSGARANPNHALSQSFEDTQSVGSVRQ----TELRSSDPSRNASQFLSSN---AVNPLAQVQNPS--VVQEAPVAFEIDTKKIDEERSRVLRERDLKGRGNQKKQRLQHRPLNDYLRVHNPDYTTPFHGLVDAFERIVPFHVLLPPEDSSVSSEEWRKHTDNLSEKYNDFYKKLRGHCDRLYDSNYEAVGEETVLGQSSLTTEDSILMERILLDDYSETVRREAALAQQRAAEAEAKRLVELERRHQLLRSQAQQGLSVSGAPSAPLATQTPHLSQTSPLHPGPQPSFESASGPLGVSNGSVSASHVIVSAGAQAALWRQASPSSAQMLPAVPDNGLVQPNSSAVAGVNVAQMQRFATGGGNVAGFVNQGQVPTSGSEVFLSSRPSEQLGSEQYLLSQPQLGKPSDATQGIAPEPK----TGLADDVMVGPME-MSDDGLVNVNMDSALQIATAGSAGSQVSAGVEQNGGNQVSLTRSGSNSALEESSAVQNGASGAEVGSVAEDDGLLSSFNDDSNAGVNGHGNEVAEKRNIFSSE----GTPQSFGIQDVT--NTATGSVGNEVSVDESLEGGDIV----GDNLGVSQLVSSADKSSIGELGDGVS----EMKQIDNSELKKS----EGGALAMGSLLNAD 1059
            GDPRLAKFDAATLE V+R T DP I+A LS QLNFLR+ AAS      Q      PF +Q + R+   PL S+  N  + A   + +  L    Q                  PA HS    +FP  T  +QD L+A+L+++I +LPPH++H Q Q             + +SK  S+   XXXXXXXXXX       N RPPRH P      V+D N VASSTSGARANPNH LS +FEDTQSV S+RQ    T +RSSD +R +  F S++   A+NP AQ+   S  +  E P+AFEID + I  E  RVLRER+L+ R NQKK+RLQ RP NDY RVHNPDY TPFHGLVDAFERIVPFHVL PPE++SVSSEEW K TD L +KY+ FY KLR HC+RL+D+++EAVG+ +VLGQSSLTTEDSI+MERILLDDY +TV+REAALA++RAA+  AK++ E+ R++QLL+SQ +  LS+S  PS   +    HL Q   LHPGPQ +F++ +G +GVSNGSVSASH IVSA AQAA+WRQ  P+  +        G+ +  S+A+  VN    Q+FA   G +  FVN  Q P+SGS ++L+++P+ Q  + +YLL+Q QL K S   Q +A E +    + LAD  ++G  E +S+D L   +M  A+    AGS  SQVS G  +NGG+Q+    SGSNSA++ESS  Q GASG  V      +G L +FN+ +N                        GTPQS G+QD +  N  +GS GN  S+D SL+   +     G N       +       G++   V+    EMK++++SEL++     E  ALAMGSLLN+D
Sbjct:  154 GDPRLAKFDAATLEHVMRTTNDPNIYAALSNQLNFLRARAASQPASAPQH-----PFQSQPSARSHQLPLLSAHHNPLLHAQNFLHKQQLYNHHQRQQPSNIQRPVAPEP---PAQHS----AFPLATNPAQDPLSATLSRDIRSLPPHLRH-QFQAGLQSRQLQAS-QLQRSKPTSTHSQXXXXXXXXXXSRRRSPSNSRPPRHGPN----TVADANAVASSTSGARANPNHPLSNAFEDTQSVASLRQQDQLTAMRSSDSARRSHHFSSTSTQPAINP-AQLHTHSSQLPPERPIAFEIDAQAIRRECERVLRERELQERANQKKRRLQQRPWNDYHRVHNPDYRTPFHGLVDAFERIVPFHVLFPPEEASVSSEEWAKCTDQLCDKYSGFYSKLRTHCNRLHDASFEAVGDGSVLGQSSLTTEDSIIMERILLDDYYQTVQREAALARKRAADEHAKKMAEVNRQNQLLQSQVRHDLSLS-QPSPSQSVPMSHLPQHPSLHPGPQAAFQAVAGQVGVSNGSVSASHDIVSARAQAAMWRQPIPNEMR------STGVARTASAALGAVNQTPAQQFAGTPGAIPSFVNVAQRPSSGSSLYLANQPTAQTETNRYLLTQSQLQK-SMLGQQVANEQQKAETSALADSSLIGEQENVSNDLLGGAHMSGAIHRTNAGSTASQVSDGAVRNGGHQIPAIASGSNSAVDESSVAQGGASGVGVAG----NGDLLAFNNGANXXXXXXXXXXXXXXXXXXXXXXXXGTPQSIGVQDSSGMNMTSGSGGNVASIDGSLDARSMAQVGSGGNCAADHSENKLQAHEFGQVEASVNAEEGEMKRVESSELRRESESPEANALAMGSLLNSD 988          
The following BLAST results are available for this feature:
BLAST of Ggra1074.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR228.020e-18646.65GLTSCR1 domain-containing protein n=1 Tax=Gracilar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 656..691
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 896..1002
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1017..1061
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 436..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 691..734
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 896..929
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..422
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 966..994
IPR015671GLTSCR protein, conserved regionPFAMPF15249GLTSCR1coord: 555..657
e-value: 4.6E-9
score: 36.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000868_piloncontigtig00000868_pilon:110089..113358 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1074.t1Ggra1074.t1Gracilaria gracilis GNS1m malemRNAtig00000868_pilon 110089..113358 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1074.t1 ID=Ggra1074.t1|Name=Ggra1074.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1062bp
MSQPERRLFADLPPGTDAPPFPSLPLPNAMPPPASAPAAPQHPLVSLATA
AHKKPRKPQPRRPRPKPAPPTLLPAPVPPNVSATPPQLPHHISQHPLGHM
FMQSHPSLFQQQFPPQPQSHQLRAALLPQRQKLPLQPHSQPQQPQPQPQS
QPQPLPQPQLQQRQHQRPQQQHQPHQLAFLRSQAPNPAATHPSPSMFLRR
PSSDPSVVHLQRPQQQHRHQQIPLGGDPRLAKFDAATLEQVLRGTTDPQI
FATLSKQLNFLRSNAASSNLQTQQMHNSASPFSTQVNTRARHAPLASSQP
NLQMGASPNVSQSALLQRQQLLQKQQLYNQHHLNQRHSPAHHSNTLSSFP
FNTTASQDHLTASLTQNIGNLPPHIQHLQAQLQSRQMQAQQRLHMHKSKA
NSSHSQASQATHSNSTSRRPSPSNKRPPRHSPKGTTIAVSDINGVASSTS
GARANPNHALSQSFEDTQSVGSVRQTELRSSDPSRNASQFLSSNAVNPLA
QVQNPSVVQEAPVAFEIDTKKIDEERSRVLRERDLKGRGNQKKQRLQHRP
LNDYLRVHNPDYTTPFHGLVDAFERIVPFHVLLPPEDSSVSSEEWRKHTD
NLSEKYNDFYKKLRGHCDRLYDSNYEAVGEETVLGQSSLTTEDSILMERI
LLDDYSETVRREAALAQQRAAEAEAKRLVELERRHQLLRSQAQQGLSVSG
APSAPLATQTPHLSQTSPLHPGPQPSFESASGPLGVSNGSVSASHVIVSA
GAQAALWRQASPSSAQMLPAVPDNGLVQPNSSAVAGVNVAQMQRFATGGG
NVAGFVNQGQVPTSGSEVFLSSRPSEQLGSEQYLLSQPQLGKPSDATQGI
APEPKTGLADDVMVGPMEMSDDGLVNVNMDSALQIATAGSAGSQVSAGVE
QNGGNQVSLTRSGSNSALEESSAVQNGASGAEVGSVAEDDGLLSSFNDDS
NAGVNGHGNEVAEKRNIFSSEGTPQSFGIQDVTNTATGSVGNEVSVDESL
EGGDIVGDNLGVSQLVSSADKSSIGELGDGVSEMKQIDNSELKKSEGGAL
AMGSLLNADER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015671GSCR1_dom