Ggra995.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra995	Ggra995	Gracilaria gracilis GNS1m male	gene	tig00000027_pilon 98456..100380 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra995.t1	Ggra995.t1	Gracilaria gracilis GNS1m male	polypeptide	tig00000027_pilon 98456..100380 -

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra995.t1.stop1	Ggra995.t1.stop1	Gracilaria gracilis GNS1m male	stop_codon	tig00000027_pilon 98456..98458 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra995.t1.CDS1	Ggra995.t1.CDS1	Gracilaria gracilis GNS1m male	CDS	tig00000027_pilon 98456..99736 -
Ggra995.t1.CDS2	Ggra995.t1.CDS2	Gracilaria gracilis GNS1m male	CDS	tig00000027_pilon 99865..100380 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra995.t1.exon1	Ggra995.t1.exon1	Gracilaria gracilis GNS1m male	exon	tig00000027_pilon 98456..99736 -
Ggra995.t1.exon2	Ggra995.t1.exon2	Gracilaria gracilis GNS1m male	exon	tig00000027_pilon 99865..100380 -

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra995.t1.intron1	Ggra995.t1.intron1	Gracilaria gracilis GNS1m male	intron	tig00000027_pilon 99737..99864 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra995.t1.start1	Ggra995.t1.start1	Gracilaria gracilis GNS1m male	start_codon	tig00000027_pilon 100378..100380 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00000027_pilon:98456..100380-
coding sequence from alignment at tig00000027_pilon:98456..100380-

mRNA sequence

>Ggra995.t1 ID=Ggra995.t1|Name=Ggra995.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=599bp
MEQDRAHSSMSDDDDDGDKDDATTTARHFVRFAKGEVRRHVEPQSDDGSH
AVTDERWRGVFDELEQQLAQHEQQQQQQQQQQQAAPALSQLQQAAAALIG
AAAAAAAAAAAAPGWAQQRELSGAFARRGRREQAAQLAQARRLCAFAQRW
LRGVARANGARGAARAARAADELRRRDARHARCRHDRDHDGAEEEEEEET
EPEQERVATVAVAAAQRVSVAREFVAHTLRFVRADGGVAGGERIRADVRA
LRAAFERAQLCVHQLVSAVNAAVRSAHRGALLEFDMYQHFTARRRSEHAA
AGDGDDGDHEDDDALARVEAAMTRGADERGAAAELGARIIAACSRLRGGV
QQGVARNAARRVAHAHSAAEVRAAVREWGGLDVLLLARLFAAVHALQQQR
RDAARAARVQRGVQRRRRRRRQRALMQATPPPLLPPRAALRELPLTAGVV
DLQREQSLLQRGAAEQPQHEGDDEREGGGGEALQQLRSECALDVRAVAQR
MRAAWQQQQQQQQQQPLRRDGARPPLLGARAAEALALGAHARAASVLAEL
SALRALLRAPRLDARVLAAAGAAAGWRAARRRRRHGAGWWRRSWRPRR*

spliced messenger RNA

>Ggra995.t1 ID=Ggra995.t1|Name=Ggra995.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1797bp|location=Sequence derived from alignment at tig00000027_pilon:98456..100380- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGCAAGACAGAGCGCACAGCAGCATGAGCGACGACGACGACGACGG
CGACAAGGACGACGCGACGACGACGGCGCGGCACTTTGTGCGCTTTGCCA
AGGGCGAGGTGCGCAGACACGTCGAGCCGCAAAGCGACGACGGCTCGCAC
GCAGTGACGGACGAGCGGTGGCGCGGCGTGTTTGACGAGCTGGAGCAGCA
GCTCGCGCAGCACGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGG
CGGCGCCCGCGCTGTCGCAGCTGCAGCAAGCGGCAGCAGCGCTGATAGGC
GCGGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCTCCCGGGTGGGCGCA
GCAGCGCGAGCTATCGGGCGCGTTTGCGCGGCGCGGGCGGCGCGAGCAGG
CGGCGCAGCTGGCGCAGGCGCGGCGGCTGTGCGCGTTTGCGCAGCGCTGG
CTGCGCGGCGTGGCGCGCGCCAACGGCGCGCGCGGCGCGGCGCGCGCGGC
GCGAGCAGCCGACGAGCTGCGCCGCCGCGACGCGCGCCACGCGCGCTGCC
GCCACGACCGCGACCACGACGGCGCGGAGGAGGAGGAGGAGGAGGAGACG
GAGCCGGAGCAGGAGCGCGTGGCGACGGTGGCGGTGGCGGCGGCGCAGCG
CGTGAGCGTCGCGCGCGAGTTTGTGGCGCACACGCTGCGCTTTGTGCGCG
CCGACGGCGGCGTGGCGGGCGGCGAGCGCATCCGCGCCGACGTGCGCGCG
CTGCGCGCCGCGTTTGAACGCGCGCAGCTGTGCGTGCACCAGCTGGTCAG
CGCCGTCAACGCGGCGGTGCGCAGCGCCCATCGCGGCGCGCTGCTCGAGT
TTGACATGTACCAGCACTTTACGGCGCGCCGCCGCAGCGAGCACGCCGCC
GCCGGCGACGGCGACGACGGCGACCACGAGGACGACGACGCGCTGGCGCG
CGTCGAGGCGGCCATGACGCGCGGTGCGGACGAGCGCGGCGCGGCGGCCG
AGCTGGGCGCGCGCATCATCGCGGCGTGCAGCCGGCTGCGCGGCGGCGTG
CAGCAGGGCGTGGCGCGCAACGCGGCGCGGCGCGTGGCGCACGCGCACAG
CGCGGCGGAGGTGCGCGCCGCCGTGCGCGAGTGGGGCGGGCTGGACGTGC
TGCTGCTGGCGCGGCTGTTCGCCGCCGTGCACGCGCTGCAGCAGCAGCGG
CGCGACGCGGCGCGCGCGGCGCGCGTGCAGCGCGGCGTGCAGCGCCGCCG
CCGCCGCCGCCGACAGCGGGCGCTGATGCAAGCCACGCCGCCGCCGCTGC
TGCCGCCGCGCGCCGCGCTGCGCGAGCTGCCGCTCACGGCGGGCGTGGTG
GACCTGCAGCGCGAGCAGTCGCTGCTGCAGCGCGGCGCGGCCGAGCAGCC
CCAGCACGAAGGCGACGACGAGCGCGAGGGCGGCGGCGGCGAGGCGTTGC
AGCAGCTGCGGAGCGAGTGCGCGCTGGACGTGCGCGCAGTGGCGCAGCGC
ATGCGCGCCGCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCT
GCGACGCGACGGCGCGCGGCCGCCGCTGCTGGGCGCGCGCGCGGCGGAAG
CGCTGGCGCTGGGCGCGCACGCGCGCGCCGCCTCCGTGCTGGCGGAGCTG
AGCGCGCTACGCGCGCTGCTACGCGCGCCGCGGCTGGACGCGCGCGTGCT
GGCCGCGGCCGGCGCCGCCGCCGGCTGGCGCGCGGCGCGCCGCCGTCGCC
GCCACGGCGCCGGCTGGTGGCGCCGCAGCTGGCGCCCGCGCCGCTGA

protein sequence of Ggra995.t1

>Ggra995.t1 ID=Ggra995.t1|Name=Ggra995.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=599bp
MEQDRAHSSMSDDDDDGDKDDATTTARHFVRFAKGEVRRHVEPQSDDGSH
AVTDERWRGVFDELEQQLAQHEQQQQQQQQQQQAAPALSQLQQAAAALIG
AAAAAAAAAAAAPGWAQQRELSGAFARRGRREQAAQLAQARRLCAFAQRW
LRGVARANGARGAARAARAADELRRRDARHARCRHDRDHDGAEEEEEEET
EPEQERVATVAVAAAQRVSVAREFVAHTLRFVRADGGVAGGERIRADVRA
LRAAFERAQLCVHQLVSAVNAAVRSAHRGALLEFDMYQHFTARRRSEHAA
AGDGDDGDHEDDDALARVEAAMTRGADERGAAAELGARIIAACSRLRGGV
QQGVARNAARRVAHAHSAAEVRAAVREWGGLDVLLLARLFAAVHALQQQR
RDAARAARVQRGVQRRRRRRRQRALMQATPPPLLPPRAALRELPLTAGVV
DLQREQSLLQRGAAEQPQHEGDDEREGGGGEALQQLRSECALDVRAVAQR
MRAAWQQQQQQQQQQPLRRDGARPPLLGARAAEALALGAHARAASVLAEL
SALRALLRAPRLDARVLAAAGAAAGWRAARRRRRHGAGWWRRSWRPRR*

mRNA from alignment at tig00000027_pilon:98456..100380-

Legend: polypeptideCDSexonstart_codonintronstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ggra995.t1 ID=Ggra995.t1|Name=Ggra995.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1925bp|location=Sequence derived from alignment at tig00000027_pilon:98456..100380- (Gracilaria gracilis GNS1m male)
ATGGAGCAAGACAGAGCGCACAGCAGCATGAGCGACGACGACGACGACGG
CGACAAGGACGACGCGACGACGACGGCGCGGCACTTTGTGCGCTTTGCCA
AGGGCGAGGTGCGCAGACACGTCGAGCCGCAAAGCGACGACGGCTCGCAC
GCAGTGACGGACGAGCGGTGGCGCGGCGTGTTTGACGAGCTGGAGCAGCA
GCTCGCGCAGCACGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGG
CGGCGCCCGCGCTGTCGCAGCTGCAGCAAGCGGCAGCAGCGCTGATAGGC
GCGGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCTCCCGGGTGGGCGCA
GCAGCGCGAGCTATCGGGCGCGTTTGCGCGGCGCGGGCGGCGCGAGCAGG
CGGCGCAGCTGGCGCAGGCGCGGCGGCTGTGCGCGTTTGCGCAGCGCTGG
CTGCGCGGCGTGGCGCGCGCCAACGGCGCGCGCGGCGCGGCGCGCGCGGC
GCGAGCAGCCGACGAGGTGCGCGCGGCGCTGGCGCACTTCGAGGCGGCGC
GCTGCGAGTGGCGCCAGCTGCTGGCGCGCGTGAACGACGCGGCGCGCCTC
GCTGGCGCCGCGCACCGCTGGCGGCCGCCTGTCTGCTGCGCGAGCTGCGC
CGCCGCGACGCGCGCCACGCGCGCTGCCGCCACGACCGCGACCACGACGG
CGCGGAGGAGGAGGAGGAGGAGGAGACGGAGCCGGAGCAGGAGCGCGTGG
CGACGGTGGCGGTGGCGGCGGCGCAGCGCGTGAGCGTCGCGCGCGAGTTT
GTGGCGCACACGCTGCGCTTTGTGCGCGCCGACGGCGGCGTGGCGGGCGG
CGAGCGCATCCGCGCCGACGTGCGCGCGCTGCGCGCCGCGTTTGAACGCG
CGCAGCTGTGCGTGCACCAGCTGGTCAGCGCCGTCAACGCGGCGGTGCGC
AGCGCCCATCGCGGCGCGCTGCTCGAGTTTGACATGTACCAGCACTTTAC
GGCGCGCCGCCGCAGCGAGCACGCCGCCGCCGGCGACGGCGACGACGGCG
ACCACGAGGACGACGACGCGCTGGCGCGCGTCGAGGCGGCCATGACGCGC
GGTGCGGACGAGCGCGGCGCGGCGGCCGAGCTGGGCGCGCGCATCATCGC
GGCGTGCAGCCGGCTGCGCGGCGGCGTGCAGCAGGGCGTGGCGCGCAACG
CGGCGCGGCGCGTGGCGCACGCGCACAGCGCGGCGGAGGTGCGCGCCGCC
GTGCGCGAGTGGGGCGGGCTGGACGTGCTGCTGCTGGCGCGGCTGTTCGC
CGCCGTGCACGCGCTGCAGCAGCAGCGGCGCGACGCGGCGCGCGCGGCGC
GCGTGCAGCGCGGCGTGCAGCGCCGCCGCCGCCGCCGCCGACAGCGGGCG
CTGATGCAAGCCACGCCGCCGCCGCTGCTGCCGCCGCGCGCCGCGCTGCG
CGAGCTGCCGCTCACGGCGGGCGTGGTGGACCTGCAGCGCGAGCAGTCGC
TGCTGCAGCGCGGCGCGGCCGAGCAGCCCCAGCACGAAGGCGACGACGAG
CGCGAGGGCGGCGGCGGCGAGGCGTTGCAGCAGCTGCGGAGCGAGTGCGC
GCTGGACGTGCGCGCAGTGGCGCAGCGCATGCGCGCCGCGTGGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCCGCTGCGACGCGACGGCGCGCGGCCG
CCGCTGCTGGGCGCGCGCGCGGCGGAAGCGCTGGCGCTGGGCGCGCACGC
GCGCGCCGCCTCCGTGCTGGCGGAGCTGAGCGCGCTACGCGCGCTGCTAC
GCGCGCCGCGGCTGGACGCGCGCGTGCTGGCCGCGGCCGGCGCCGCCGCC
GGCTGGCGCGCGGCGCGCCGCCGTCGCCGCCACGGCGCCGGCTGGTGGCG
CCGCAGCTGGCGCCCGCGCCGCTGA

Coding sequence (CDS) from alignment at tig00000027_pilon:98456..100380-

>Ggra995.t1 ID=Ggra995.t1|Name=Ggra995.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1797bp|location=Sequence derived from alignment at tig00000027_pilon:98456..100380- (Gracilaria gracilis GNS1m male)
ATGGAGCAAGACAGAGCGCACAGCAGCATGAGCGACGACGACGACGACGG
CGACAAGGACGACGCGACGACGACGGCGCGGCACTTTGTGCGCTTTGCCA
AGGGCGAGGTGCGCAGACACGTCGAGCCGCAAAGCGACGACGGCTCGCAC
GCAGTGACGGACGAGCGGTGGCGCGGCGTGTTTGACGAGCTGGAGCAGCA
GCTCGCGCAGCACGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGG
CGGCGCCCGCGCTGTCGCAGCTGCAGCAAGCGGCAGCAGCGCTGATAGGC
GCGGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCTCCCGGGTGGGCGCA
GCAGCGCGAGCTATCGGGCGCGTTTGCGCGGCGCGGGCGGCGCGAGCAGG
CGGCGCAGCTGGCGCAGGCGCGGCGGCTGTGCGCGTTTGCGCAGCGCTGG
CTGCGCGGCGTGGCGCGCGCCAACGGCGCGCGCGGCGCGGCGCGCGCGGC
GCGAGCAGCCGACGAGCTGCGCCGCCGCGACGCGCGCCACGCGCGCTGCC
GCCACGACCGCGACCACGACGGCGCGGAGGAGGAGGAGGAGGAGGAGACG
GAGCCGGAGCAGGAGCGCGTGGCGACGGTGGCGGTGGCGGCGGCGCAGCG
CGTGAGCGTCGCGCGCGAGTTTGTGGCGCACACGCTGCGCTTTGTGCGCG
CCGACGGCGGCGTGGCGGGCGGCGAGCGCATCCGCGCCGACGTGCGCGCG
CTGCGCGCCGCGTTTGAACGCGCGCAGCTGTGCGTGCACCAGCTGGTCAG
CGCCGTCAACGCGGCGGTGCGCAGCGCCCATCGCGGCGCGCTGCTCGAGT
TTGACATGTACCAGCACTTTACGGCGCGCCGCCGCAGCGAGCACGCCGCC
GCCGGCGACGGCGACGACGGCGACCACGAGGACGACGACGCGCTGGCGCG
CGTCGAGGCGGCCATGACGCGCGGTGCGGACGAGCGCGGCGCGGCGGCCG
AGCTGGGCGCGCGCATCATCGCGGCGTGCAGCCGGCTGCGCGGCGGCGTG
CAGCAGGGCGTGGCGCGCAACGCGGCGCGGCGCGTGGCGCACGCGCACAG
CGCGGCGGAGGTGCGCGCCGCCGTGCGCGAGTGGGGCGGGCTGGACGTGC
TGCTGCTGGCGCGGCTGTTCGCCGCCGTGCACGCGCTGCAGCAGCAGCGG
CGCGACGCGGCGCGCGCGGCGCGCGTGCAGCGCGGCGTGCAGCGCCGCCG
CCGCCGCCGCCGACAGCGGGCGCTGATGCAAGCCACGCCGCCGCCGCTGC
TGCCGCCGCGCGCCGCGCTGCGCGAGCTGCCGCTCACGGCGGGCGTGGTG
GACCTGCAGCGCGAGCAGTCGCTGCTGCAGCGCGGCGCGGCCGAGCAGCC
CCAGCACGAAGGCGACGACGAGCGCGAGGGCGGCGGCGGCGAGGCGTTGC
AGCAGCTGCGGAGCGAGTGCGCGCTGGACGTGCGCGCAGTGGCGCAGCGC
ATGCGCGCCGCGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCT
GCGACGCGACGGCGCGCGGCCGCCGCTGCTGGGCGCGCGCGCGGCGGAAG
CGCTGGCGCTGGGCGCGCACGCGCGCGCCGCCTCCGTGCTGGCGGAGCTG
AGCGCGCTACGCGCGCTGCTACGCGCGCCGCGGCTGGACGCGCGCGTGCT
GGCCGCGGCCGGCGCCGCCGCCGGCTGGCGCGCGGCGCGCCGCCGTCGCC
GCCACGGCGCCGGCTGGTGGCGCCGCAGCTGGCGCCCGCGCCGCTGA