Ggra9331.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9331.t1
Unique NameGgra9331.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length769
Homology
BLAST of Ggra9331.t1 vs. uniprot
Match: A0A2V3IMI9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI9_9FLOR)

HSP 1 Score: 408 bits (1049), Expect = 5.860e-129
Identity = 226/420 (53.81%), Postives = 276/420 (65.71%), Query Frame = 0
Query:  101 ATQDVIRARSKGRKHSGLKELKPINLLYKKLLSYRYDRLEDSSLDRTPRGTGKVKDCIKRMQLSLRNQLFTGDDPILVFDFLSRFVAEANILGMNEGQAFVALPYFLRGLEEDQKNSVRGSSRASEGGVPCWPEAVQYLLRSYATGTAIQSAILALRDTKQRPGETETDYSVRLNKTFHRCSNVHSAQERCTMFVDGLDPAIRTLVARRREENRKTTYLELVHVDVGTGNPSASMLADEHSQKK----------------------YDQVHFARSDVLSIPTTELSSTTDASFQTAPDNTLLYADSNRVRQPRLSYENGGTRASRPGWQASRPA-----------------------------CVLTMREWAQVIANYESLSPDEKASVPMASYIRAKMDIPRTIAAPVAQNMVTSHPRG 469
            AT   +R R KGRKH GLKELKP NLLY++LLSYRY RLEDSS++RTPRGTG++KDCIKR++L+LR   FTG+DPIL+ DFL+RFVAEA+ILGM+E QA++ALPYFLRG+ EDQ NSVRGSSRA+EGGV CWPEAVQYLLRSYATG AIQ+AILALRDT+Q+  E+ET YS RL K FHRC NV+SAQERCTMFVDGLDP IRTLVAR RE+ R+ TYLELV      G+   +    +H   K                      YD +H  +SD  S+PTTEL STT+ S  T   +  +YA  N V    + Y +G TR  RPGW+   P                              C L M++ A+VI NYE+L+P EK  VP ++Y+RA+   PR IA   +Q+  T  P+G
Sbjct:  242 ATHGAVRTREKGRKHLGLKELKPTNLLYRRLLSYRYYRLEDSSMERTPRGTGRLKDCIKRLELTLRKHQFTGEDPILILDFLARFVAEADILGMSEAQAYIALPYFLRGMAEDQFNSVRGSSRATEGGVTCWPEAVQYLLRSYATGNAIQAAILALRDTRQKSEESETAYSTRLTKAFHRCGNVYSAQERCTMFVDGLDPTIRTLVARHREDRRRITYLELVQFAQAEGDALRARKGTKHRSGKVLHLEARQVPSPPLTRRTDHGMYDNMHLLQSDS-SVPTTELPSTTEPS--TGDVDPAMYAG-NHVPGLTVPYSSG-TRTQRPGWKDPYPPRSDRRPHIADQLRHIICHLCYKPGHVSTNCYLLMKDMAKVIVNYEALTPAEKERVPASAYLRARSVFPRNIADFQSQDAGTQPPQG 656          
BLAST of Ggra9331.t1 vs. uniprot
Match: A0A2V3IQ80 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ80_9FLOR)

HSP 1 Score: 130 bits (328), Expect = 2.210e-30
Identity = 68/146 (46.58%), Postives = 96/146 (65.75%), Query Frame = 0
Query:  523 LRRPWIR-VRNNRFPDRVMVMAKLNYKVYADLGLSPQFTVRYLTVLDTGAGLNFIAETALPPALRSHTRRGDIPEVADANNNPFSTVGYIELVIHLGSCVVKLDFVVCRSLAAPVILGCDFCDRFVDAIRLRQRRVEMEDGSSVPI 667
            L+RP  R V   R  D V++MA  NYKVYAD+GLS     R L VLDTGAG NF   + L     +  ++  +P++ DAN  P  ++G I+LV+  G+ V +L F+VC +LA+PV+LGCD+ DRFV+ IR + R VE+++G +VPI
Sbjct:  116 LKRPCRRYVCPERRTDYVLIMAHRNYKVYADIGLSKSLLSRRLAVLDTGAGPNFTRLSELDSDEPAGMQKACLPDIRDANKRPIKSLGTIKLVVQHGNHVFRLSFIVCTTLASPVVLGCDYFDRFVETIRPKNREVELDEGFTVPI 261          
BLAST of Ggra9331.t1 vs. uniprot
Match: A0A2V3ICD1 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICD1_9FLOR)

HSP 1 Score: 86.7 bits (213), Expect = 7.070e-15
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0
Query:  101 ATQDVIRARSKGRKHSGLKELKPINLLYKKLLSYRYDRLEDSSLDRTPRGTGKVKD 156
            AT   +R R KGRKH GLKELKP NLLY+KLLSYRY RLEDSS++RT RGTG+VKD
Sbjct:  242 ATHGAVRTREKGRKHLGLKELKPTNLLYRKLLSYRYYRLEDSSMERTSRGTGRVKD 297          
BLAST of Ggra9331.t1 vs. uniprot
Match: A0A2V3IJC9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJC9_9FLOR)

HSP 1 Score: 72.4 bits (176), Expect = 1.800e-11
Identity = 44/110 (40.00%), Postives = 59/110 (53.64%), Query Frame = 0
Query:  502 QVRILSRKQAVEDVNSEHL--GVLRRPWIR-VRNNRFPDRVMVMAKLNYKVYADLGLSPQFTVRYLTVLDTGAGLNFIAETALPPALRSHTRRGDIPEVADANNNPFSTV 608
            +++IL R +   +V         L+RPW   V   R  D VM+MA+ NYKVYAD+G S     R L VLDTGAG NFI    L    RS  +   +P++ DAN  P  ++
Sbjct:   22 KLKILLRSERSSNVGKRVQLDSALKRPWRGYVDMPRKTDYVMIMARRNYKVYADIGSSKSLLSRRLAVLDTGAGPNFIRLYELQSDERSRIQEACLPDIRDANKRPIKSL 131          
The following BLAST results are available for this feature:
BLAST of Ggra9331.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IMI95.860e-12953.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQ802.210e-3046.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICD17.070e-1575.00Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IJC91.800e-1140.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 560..671
e-value: 3.9E-7
score: 31.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 678..699
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 561..643
e-value: 1.25588E-7
score: 48.1016

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000863_piloncontigtig00000863_pilon:917505..920498 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9331.t1Ggra9331.t1Gracilaria gracilis GNS1m malemRNAtig00000863_pilon 917505..920498 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9331.t1 ID=Ggra9331.t1|Name=Ggra9331.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=769bp
MPATEAVPTTTRLPPTSLINPHRGDGTAPAVAGPVPIVGVAVSHGDKKVS
GSKARKERKNYDSDSSASSLSSRRSTGSDSSDSSVEAARHERSSRSKRSS
ATQDVIRARSKGRKHSGLKELKPINLLYKKLLSYRYDRLEDSSLDRTPRG
TGKVKDCIKRMQLSLRNQLFTGDDPILVFDFLSRFVAEANILGMNEGQAF
VALPYFLRGLEEDQKNSVRGSSRASEGGVPCWPEAVQYLLRSYATGTAIQ
SAILALRDTKQRPGETETDYSVRLNKTFHRCSNVHSAQERCTMFVDGLDP
AIRTLVARRREENRKTTYLELVHVDVGTGNPSASMLADEHSQKKYDQVHF
ARSDVLSIPTTELSSTTDASFQTAPDNTLLYADSNRVRQPRLSYENGGTR
ASRPGWQASRPACVLTMREWAQVIANYESLSPDEKASVPMASYIRAKMDI
PRTIAAPVAQNMVTSHPRGICSENLIVGVSSLGEAPSELRLKAPEASPPR
SQVRILSRKQAVEDVNSEHLGVLRRPWIRVRNNRFPDRVMVMAKLNYKVY
ADLGLSPQFTVRYLTVLDTGAGLNFIAETALPPALRSHTRRGDIPEVADA
NNNPFSTVGYIELVIHLGSCVVKLDFVVCRSLAAPVILGCDFCDRFVDAI
RLRQRRVEMEDGSSVPIVRRPVRHASKKHVPLPAAQEAPPSSRESTKLRV
ASETRVPPESQVWVQVNSRQHGLRIVQPLPQNNPVSGEKPIDWLGHAASN
CVGTDEDDCCRCARNRSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom_sf