Ggra9326.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9326.t1
Unique NameGgra9326.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length141
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000863_piloncontigtig00000863_pilon:865692..866114 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9326Ggra9326Gracilaria gracilis GNS1m malegenetig00000863_pilon 865692..866114 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9326.t1.stop1Ggra9326.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000863_pilon 865692..865694 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9326.t1.CDS1Ggra9326.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000863_pilon 865692..866114 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9326.t1.exon1Ggra9326.t1.exon1Gracilaria gracilis GNS1m maleexontig00000863_pilon 865692..866114 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9326.t1.start1Ggra9326.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000863_pilon 866112..866114 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9326.t1Ggra9326.t1Gracilaria gracilis GNS1m malepolypeptidetig00000863_pilon 865692..866114 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9326.t1 ID=Ggra9326.t1|Name=Ggra9326.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=141bp
MSTACNGLPEKQTCPGMPSQFIKHLHRARVLKERGNFTLLHADRSDLPSP
VNWNPNSWLSKMPNFVYELHSASGVHQLAASIHSLLKSQAPDQYLQTLLR
PHNAGMLLWSVVDEESAEYSNLANALKMTTPEGPSKRQDN*
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spliced messenger RNA

>Ggra9326.t1 ID=Ggra9326.t1|Name=Ggra9326.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=423bp|location=Sequence derived from alignment at tig00000863_pilon:865692..866114- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCAACAGCGTGCAATGGTCTCCCCGAGAAGCAAACATGTCCGGGAAT
GCCCTCACAGTTCATCAAGCACTTGCACAGAGCCAGAGTGCTTAAGGAAA
GAGGCAATTTCACACTATTACATGCTGATCGGAGTGATCTCCCTTCGCCG
GTGAACTGGAACCCCAACTCATGGCTTTCAAAGATGCCAAACTTCGTTTA
CGAACTTCATAGCGCTTCTGGAGTTCATCAACTAGCTGCTTCTATTCACA
GTCTTTTGAAAAGTCAAGCGCCAGACCAGTATCTTCAAACTTTGCTTCGA
CCGCACAATGCCGGTATGCTGTTGTGGTCAGTGGTTGATGAAGAGAGTGC
AGAGTATTCCAACCTGGCGAACGCTTTGAAAATGACCACACCTGAAGGAC
CCAGCAAGAGACAGGATAATTAG
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protein sequence of Ggra9326.t1

>Ggra9326.t1 ID=Ggra9326.t1|Name=Ggra9326.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=141bp
MSTACNGLPEKQTCPGMPSQFIKHLHRARVLKERGNFTLLHADRSDLPSP
VNWNPNSWLSKMPNFVYELHSASGVHQLAASIHSLLKSQAPDQYLQTLLR
PHNAGMLLWSVVDEESAEYSNLANALKMTTPEGPSKRQDN*
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mRNA from alignment at tig00000863_pilon:865692..866114-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9326.t1 ID=Ggra9326.t1|Name=Ggra9326.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=423bp|location=Sequence derived from alignment at tig00000863_pilon:865692..866114- (Gracilaria gracilis GNS1m male)
ATGTCAACAGCGTGCAATGGTCTCCCCGAGAAGCAAACATGTCCGGGAAT
GCCCTCACAGTTCATCAAGCACTTGCACAGAGCCAGAGTGCTTAAGGAAA
GAGGCAATTTCACACTATTACATGCTGATCGGAGTGATCTCCCTTCGCCG
GTGAACTGGAACCCCAACTCATGGCTTTCAAAGATGCCAAACTTCGTTTA
CGAACTTCATAGCGCTTCTGGAGTTCATCAACTAGCTGCTTCTATTCACA
GTCTTTTGAAAAGTCAAGCGCCAGACCAGTATCTTCAAACTTTGCTTCGA
CCGCACAATGCCGGTATGCTGTTGTGGTCAGTGGTTGATGAAGAGAGTGC
AGAGTATTCCAACCTGGCGAACGCTTTGAAAATGACCACACCTGAAGGAC
CCAGCAAGAGACAGGATAATTAG
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Coding sequence (CDS) from alignment at tig00000863_pilon:865692..866114-

>Ggra9326.t1 ID=Ggra9326.t1|Name=Ggra9326.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=423bp|location=Sequence derived from alignment at tig00000863_pilon:865692..866114- (Gracilaria gracilis GNS1m male)
ATGTCAACAGCGTGCAATGGTCTCCCCGAGAAGCAAACATGTCCGGGAAT
GCCCTCACAGTTCATCAAGCACTTGCACAGAGCCAGAGTGCTTAAGGAAA
GAGGCAATTTCACACTATTACATGCTGATCGGAGTGATCTCCCTTCGCCG
GTGAACTGGAACCCCAACTCATGGCTTTCAAAGATGCCAAACTTCGTTTA
CGAACTTCATAGCGCTTCTGGAGTTCATCAACTAGCTGCTTCTATTCACA
GTCTTTTGAAAAGTCAAGCGCCAGACCAGTATCTTCAAACTTTGCTTCGA
CCGCACAATGCCGGTATGCTGTTGTGGTCAGTGGTTGATGAAGAGAGTGC
AGAGTATTCCAACCTGGCGAACGCTTTGAAAATGACCACACCTGAAGGAC
CCAGCAAGAGACAGGATAATTAG
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