Ggra9300.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9300.t1
Unique NameGgra9300.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length366
Homology
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BLAST of Ggra9300.t1 vs. uniprot
Match: A0A2V3IIA9 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIA9_9FLOR)

HSP 1 Score: 115 bits (288), Expect = 1.300e-26
Identity = 69/191 (36.13%), Postives = 99/191 (51.83%), Query Frame = 0 
Query:   70 PTWRFIEERVELTISNHHQWIHNLKDTVIEHDYESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNLIADPDIFIKSLAKIVLQKTEVLATKNQTDSFSLMNEALNLRRTGTIANYVNEHLLIPNKQIMANTPDVQSEQYTVNLNLNGLSADQRFGSQATKILVKALRNTINECQLRLDEFGVLMKRQ 260
            P+ RF EE VELT  N+ QW  NL D + EH+Y+ L                                +++ADP +F  S A IV     V+ +++  + FSL  EA++LRRTGTI  Y+  HL I  KQI ANTP V  E+ T+N  L GL  D RF  +A  +++     TI+E Q RL+++  ++ +Q
Sbjct:    6 PSLRFTEELVELTAQNYIQWRQNLDDILTEHEYQQLLSITFQPTTSEDHKATASLRGIITKSITQDVGDMLADPTLFNHSPAAIVHGIQRVIDSQSAKNYFSLTTEAMSLRRTGTILEYIASHLAIRRKQISANTPGVSDERVTINYILQGLVNDHRFSQRAVTLMLDTPPTTISETQHRLEQYESILNQQ 196
[Close]
BLAST of Ggra9300.t1 vs. uniprot
Match: A0A2V3IQ93 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ93_9FLOR)

HSP 1 Score: 83.6 bits (205), Expect = 9.890e-16
Identity = 51/146 (34.93%), Postives = 73/146 (50.00%), Query Frame = 0 
Query:   70 PTWRFIEERVELTISNHHQWIHNLKDTVIEHDYESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNLIADPDIFIKSLAKIVLQKTEVLATKNQTDSFSLMNEALNLRRTGTIANYVNEHLLIPNKQIMANTPDVQSEQYTVN 215
            P+WRF EE VELT  N+     NL + + E +Y+ L                                +++ADP +F +S A IV     V+ +++  + FSL  EA+ LRRTGTI+ Y+  HL I  KQI ANTP +  E+ T+N
Sbjct:    6 PSWRFTEELVELTAQNYIHSRQNLDNILTEQEYQQLLSITFQPTTSKDHKATTSLRRIITKSITQDVSDMLADPTLFNQSPAAIVHGIQRVIDSQSSKNYFSLTTEAMKLRRTGTISEYIASHLAICRKQISANTPGIFDERVTIN 151
The following BLAST results are available for this feature:
BLAST of Ggra9300.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIA91.300e-2636.13Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IQ939.890e-1634.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000863_piloncontigtig00000863_pilon:140569..143085 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9300.t1Ggra9300.t1Gracilaria gracilis GNS1m malemRNAtig00000863_pilon 140569..143085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9300.t1 ID=Ggra9300.t1|Name=Ggra9300.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=366bp
MSLTLHKNSPAVKLLIKKIKRGTITEAQTPAEVWRSEALFQKHKLPAFRN
RLYKLRHQIQTSNEPNSSFPTWRFIEERVELTISNHHQWIHNLKDTVIEH
DYESLLDHPFQAQTSKQHKAVSSVRRKIIKSITSEVVNLIADPDIFIKSL
AKIVLQKTEVLATKNQTDSFSLMNEALNLRRTGTIANYVNEHLLIPNKQI
MANTPDVQSEQYTVNLNLNGLSADQRFGSQATKILVKALRNTINECQLRL
DEFGVLMKRQIGDAEQSSSTNFRGRETYRGRKRYRRRGRGRGHLQQSDHH
VQDMFTQIVSNINELHADTKPKKPRATRGRPNLSLLEDTVEKEALRAYIA
SASDPSAPRDTTDSN*
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