Ggra10065.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10065.t1
Unique NameGgra10065.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length211
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000862_piloncontigtig00000862_pilon:152262..152894 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10065Ggra10065Gracilaria gracilis GNS1m malegenetig00000862_pilon 152262..152894 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10065.t1.start1Ggra10065.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000862_pilon 152262..152264 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10065.t1.CDS1Ggra10065.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000862_pilon 152262..152894 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10065.t1.exon1Ggra10065.t1.exon1Gracilaria gracilis GNS1m maleexontig00000862_pilon 152262..152894 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10065.t1.stop1Ggra10065.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000862_pilon 152892..152894 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10065.t1Ggra10065.t1Gracilaria gracilis GNS1m malepolypeptidetig00000862_pilon 152262..152894 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10065.t1 ID=Ggra10065.t1|Name=Ggra10065.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=211bp
MKLFFTTVALISLCNVASACSCIYQSLQDVFYSDGIDWVIKGTVISSTRI
PFKQPSVRTLTAPLSRQQDGLLSAPATTASPPAFGFGIAFPIGPTRVEHQ
VRVEQVFKGCDVPEVIKVFTLSGTSCSLQLFTGVTYLLTLARDTGMGSGV
FQCAYNRRFESVSGHVNFLERAGNCCGDDCPTPSPRPFPGSIGIAGLARS
ASRTSSWYVL*
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spliced messenger RNA

>Ggra10065.t1 ID=Ggra10065.t1|Name=Ggra10065.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=633bp|location=Sequence derived from alignment at tig00000862_pilon:152262..152894+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGCTTTTCTTCACCACGGTCGCTCTGATTTCGCTGTGTAATGTGGC
TAGTGCATGCTCTTGCATATATCAGTCCCTTCAAGATGTGTTCTATAGTG
ACGGCATCGACTGGGTTATCAAGGGCACTGTGATCTCCTCCACTCGAATT
CCTTTCAAACAGCCGTCGGTTCGCACGCTTACGGCGCCACTCTCTCGCCA
GCAAGATGGCCTTCTTTCGGCCCCCGCAACAACCGCGTCGCCGCCGGCGT
TCGGCTTTGGTATAGCGTTTCCTATAGGCCCTACTAGGGTAGAGCACCAA
GTCAGGGTGGAGCAGGTGTTCAAGGGCTGTGATGTACCGGAGGTGATTAA
GGTGTTCACGCTGAGTGGCACCTCCTGTTCGCTGCAGCTGTTCACGGGTG
TTACGTACCTCCTGACGCTAGCGCGTGACACGGGGATGGGGTCAGGCGTG
TTTCAGTGCGCGTACAATCGACGCTTTGAATCGGTATCAGGCCATGTTAA
CTTTTTGGAAAGAGCTGGCAACTGCTGCGGTGATGATTGCCCTACACCCT
CACCACGCCCTTTCCCGGGCAGCATAGGCATAGCAGGACTCGCAAGGAGC
GCAAGCAGAACATCGTCTTGGTATGTACTCTGA
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protein sequence of Ggra10065.t1

>Ggra10065.t1 ID=Ggra10065.t1|Name=Ggra10065.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=211bp
MKLFFTTVALISLCNVASACSCIYQSLQDVFYSDGIDWVIKGTVISSTRI
PFKQPSVRTLTAPLSRQQDGLLSAPATTASPPAFGFGIAFPIGPTRVEHQ
VRVEQVFKGCDVPEVIKVFTLSGTSCSLQLFTGVTYLLTLARDTGMGSGV
FQCAYNRRFESVSGHVNFLERAGNCCGDDCPTPSPRPFPGSIGIAGLARS
ASRTSSWYVL*
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mRNA from alignment at tig00000862_pilon:152262..152894+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10065.t1 ID=Ggra10065.t1|Name=Ggra10065.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=633bp|location=Sequence derived from alignment at tig00000862_pilon:152262..152894+ (Gracilaria gracilis GNS1m male)
ATGAAGCTTTTCTTCACCACGGTCGCTCTGATTTCGCTGTGTAATGTGGC
TAGTGCATGCTCTTGCATATATCAGTCCCTTCAAGATGTGTTCTATAGTG
ACGGCATCGACTGGGTTATCAAGGGCACTGTGATCTCCTCCACTCGAATT
CCTTTCAAACAGCCGTCGGTTCGCACGCTTACGGCGCCACTCTCTCGCCA
GCAAGATGGCCTTCTTTCGGCCCCCGCAACAACCGCGTCGCCGCCGGCGT
TCGGCTTTGGTATAGCGTTTCCTATAGGCCCTACTAGGGTAGAGCACCAA
GTCAGGGTGGAGCAGGTGTTCAAGGGCTGTGATGTACCGGAGGTGATTAA
GGTGTTCACGCTGAGTGGCACCTCCTGTTCGCTGCAGCTGTTCACGGGTG
TTACGTACCTCCTGACGCTAGCGCGTGACACGGGGATGGGGTCAGGCGTG
TTTCAGTGCGCGTACAATCGACGCTTTGAATCGGTATCAGGCCATGTTAA
CTTTTTGGAAAGAGCTGGCAACTGCTGCGGTGATGATTGCCCTACACCCT
CACCACGCCCTTTCCCGGGCAGCATAGGCATAGCAGGACTCGCAAGGAGC
GCAAGCAGAACATCGTCTTGGTATGTACTCTGA
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Coding sequence (CDS) from alignment at tig00000862_pilon:152262..152894+

>Ggra10065.t1 ID=Ggra10065.t1|Name=Ggra10065.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=633bp|location=Sequence derived from alignment at tig00000862_pilon:152262..152894+ (Gracilaria gracilis GNS1m male)
ATGAAGCTTTTCTTCACCACGGTCGCTCTGATTTCGCTGTGTAATGTGGC
TAGTGCATGCTCTTGCATATATCAGTCCCTTCAAGATGTGTTCTATAGTG
ACGGCATCGACTGGGTTATCAAGGGCACTGTGATCTCCTCCACTCGAATT
CCTTTCAAACAGCCGTCGGTTCGCACGCTTACGGCGCCACTCTCTCGCCA
GCAAGATGGCCTTCTTTCGGCCCCCGCAACAACCGCGTCGCCGCCGGCGT
TCGGCTTTGGTATAGCGTTTCCTATAGGCCCTACTAGGGTAGAGCACCAA
GTCAGGGTGGAGCAGGTGTTCAAGGGCTGTGATGTACCGGAGGTGATTAA
GGTGTTCACGCTGAGTGGCACCTCCTGTTCGCTGCAGCTGTTCACGGGTG
TTACGTACCTCCTGACGCTAGCGCGTGACACGGGGATGGGGTCAGGCGTG
TTTCAGTGCGCGTACAATCGACGCTTTGAATCGGTATCAGGCCATGTTAA
CTTTTTGGAAAGAGCTGGCAACTGCTGCGGTGATGATTGCCCTACACCCT
CACCACGCCCTTTCCCGGGCAGCATAGGCATAGCAGGACTCGCAAGGAGC
GCAAGCAGAACATCGTCTTGGTATGTACTCTGA
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