Ggra10066.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10066.t1
Unique NameGgra10066.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length328
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000862_piloncontigtig00000862_pilon:164848..165831 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10066Ggra10066Gracilaria gracilis GNS1m malegenetig00000862_pilon 164848..165831 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10066.t1.stop1Ggra10066.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000862_pilon 164848..164850 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10066.t1.CDS1Ggra10066.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000862_pilon 164848..165831 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10066.t1.exon1Ggra10066.t1.exon1Gracilaria gracilis GNS1m maleexontig00000862_pilon 164848..165831 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10066.t1.start1Ggra10066.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000862_pilon 165829..165831 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10066.t1Ggra10066.t1Gracilaria gracilis GNS1m malepolypeptidetig00000862_pilon 164848..165831 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10066.t1 ID=Ggra10066.t1|Name=Ggra10066.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=328bp
MATITLRPSIFSLIVTFVSVIAEVGFLSALIVFNGLHQCSNLSRGKSVSI
RKHGTRIKLMAITSMLLFVIVEILASSNTFTTFATESKLQRCNVTEPLLP
GAYDATGAEIGFFSCLQVNNSDFYIFPSNHSTPDGTVACGDSYAFRYVNQ
ERVQQSLGGDGIENCSDNGAICVFVRSEGRVLFLSEPYRNGSEPNEFVAT
QMSFDPAPHLRTFAEKATDSFLHSVSEELEVRRRMIMGSRNTTCRFTSQG
SEHTRIPTPLLAVSICVWVMSVVLFFICVPFKRRVFFDMNNPLHWANRAR
RAVDDEVTANFLQCTENSDGHQIYLTE*
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spliced messenger RNA

>Ggra10066.t1 ID=Ggra10066.t1|Name=Ggra10066.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=984bp|location=Sequence derived from alignment at tig00000862_pilon:164848..165831- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCACGATCACACTTCGTCCTTCGATCTTTAGCCTTATCGTCACTTT
CGTCTCCGTCATCGCGGAGGTCGGATTTCTATCAGCTCTTATTGTCTTCA
ATGGCCTGCACCAATGCTCTAATCTCTCGCGCGGCAAATCAGTAAGCATT
CGCAAACATGGCACACGCATCAAGCTCATGGCCATTACATCAATGTTGCT
TTTCGTCATTGTAGAGATCCTGGCTTCCTCCAATACTTTCACTACCTTTG
CCACCGAATCTAAGCTACAGCGTTGCAATGTAACTGAACCTCTGTTACCG
GGTGCGTACGACGCAACTGGAGCAGAAATTGGATTCTTCTCTTGCTTGCA
AGTGAACAACAGCGACTTTTACATCTTTCCCTCTAACCACAGTACCCCAG
ACGGTACCGTTGCTTGTGGCGATTCGTACGCTTTTCGATATGTGAATCAA
GAGCGAGTTCAACAGAGTCTTGGAGGTGATGGGATTGAGAACTGCTCCGA
TAATGGGGCCATATGTGTTTTCGTTCGATCTGAAGGGCGAGTACTATTCC
TCTCGGAGCCTTACAGAAACGGTTCTGAACCGAATGAGTTCGTTGCCACC
CAAATGAGCTTCGATCCGGCACCTCACCTTCGGACGTTTGCAGAAAAGGC
AACAGACTCGTTTTTACATAGTGTCTCTGAAGAGCTTGAAGTTAGAAGAC
GAATGATCATGGGGTCACGGAACACTACATGTCGCTTTACCTCTCAAGGA
TCAGAACATACTAGGATTCCGACACCGTTGCTTGCTGTTTCCATTTGCGT
GTGGGTCATGTCGGTCGTTCTATTCTTCATTTGTGTTCCCTTTAAGAGGA
GGGTTTTCTTCGATATGAATAACCCCTTGCATTGGGCAAACCGGGCCCGC
CGCGCTGTTGATGATGAGGTGACCGCCAACTTTCTACAGTGCACAGAGAA
CAGTGATGGTCACCAAATCTACTTGACCGAATAA
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protein sequence of Ggra10066.t1

>Ggra10066.t1 ID=Ggra10066.t1|Name=Ggra10066.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=328bp
MATITLRPSIFSLIVTFVSVIAEVGFLSALIVFNGLHQCSNLSRGKSVSI
RKHGTRIKLMAITSMLLFVIVEILASSNTFTTFATESKLQRCNVTEPLLP
GAYDATGAEIGFFSCLQVNNSDFYIFPSNHSTPDGTVACGDSYAFRYVNQ
ERVQQSLGGDGIENCSDNGAICVFVRSEGRVLFLSEPYRNGSEPNEFVAT
QMSFDPAPHLRTFAEKATDSFLHSVSEELEVRRRMIMGSRNTTCRFTSQG
SEHTRIPTPLLAVSICVWVMSVVLFFICVPFKRRVFFDMNNPLHWANRAR
RAVDDEVTANFLQCTENSDGHQIYLTE*
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mRNA from alignment at tig00000862_pilon:164848..165831-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10066.t1 ID=Ggra10066.t1|Name=Ggra10066.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=984bp|location=Sequence derived from alignment at tig00000862_pilon:164848..165831- (Gracilaria gracilis GNS1m male)
ATGGCCACGATCACACTTCGTCCTTCGATCTTTAGCCTTATCGTCACTTT
CGTCTCCGTCATCGCGGAGGTCGGATTTCTATCAGCTCTTATTGTCTTCA
ATGGCCTGCACCAATGCTCTAATCTCTCGCGCGGCAAATCAGTAAGCATT
CGCAAACATGGCACACGCATCAAGCTCATGGCCATTACATCAATGTTGCT
TTTCGTCATTGTAGAGATCCTGGCTTCCTCCAATACTTTCACTACCTTTG
CCACCGAATCTAAGCTACAGCGTTGCAATGTAACTGAACCTCTGTTACCG
GGTGCGTACGACGCAACTGGAGCAGAAATTGGATTCTTCTCTTGCTTGCA
AGTGAACAACAGCGACTTTTACATCTTTCCCTCTAACCACAGTACCCCAG
ACGGTACCGTTGCTTGTGGCGATTCGTACGCTTTTCGATATGTGAATCAA
GAGCGAGTTCAACAGAGTCTTGGAGGTGATGGGATTGAGAACTGCTCCGA
TAATGGGGCCATATGTGTTTTCGTTCGATCTGAAGGGCGAGTACTATTCC
TCTCGGAGCCTTACAGAAACGGTTCTGAACCGAATGAGTTCGTTGCCACC
CAAATGAGCTTCGATCCGGCACCTCACCTTCGGACGTTTGCAGAAAAGGC
AACAGACTCGTTTTTACATAGTGTCTCTGAAGAGCTTGAAGTTAGAAGAC
GAATGATCATGGGGTCACGGAACACTACATGTCGCTTTACCTCTCAAGGA
TCAGAACATACTAGGATTCCGACACCGTTGCTTGCTGTTTCCATTTGCGT
GTGGGTCATGTCGGTCGTTCTATTCTTCATTTGTGTTCCCTTTAAGAGGA
GGGTTTTCTTCGATATGAATAACCCCTTGCATTGGGCAAACCGGGCCCGC
CGCGCTGTTGATGATGAGGTGACCGCCAACTTTCTACAGTGCACAGAGAA
CAGTGATGGTCACCAAATCTACTTGACCGAATAA
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Coding sequence (CDS) from alignment at tig00000862_pilon:164848..165831-

>Ggra10066.t1 ID=Ggra10066.t1|Name=Ggra10066.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=984bp|location=Sequence derived from alignment at tig00000862_pilon:164848..165831- (Gracilaria gracilis GNS1m male)
ATGGCCACGATCACACTTCGTCCTTCGATCTTTAGCCTTATCGTCACTTT
CGTCTCCGTCATCGCGGAGGTCGGATTTCTATCAGCTCTTATTGTCTTCA
ATGGCCTGCACCAATGCTCTAATCTCTCGCGCGGCAAATCAGTAAGCATT
CGCAAACATGGCACACGCATCAAGCTCATGGCCATTACATCAATGTTGCT
TTTCGTCATTGTAGAGATCCTGGCTTCCTCCAATACTTTCACTACCTTTG
CCACCGAATCTAAGCTACAGCGTTGCAATGTAACTGAACCTCTGTTACCG
GGTGCGTACGACGCAACTGGAGCAGAAATTGGATTCTTCTCTTGCTTGCA
AGTGAACAACAGCGACTTTTACATCTTTCCCTCTAACCACAGTACCCCAG
ACGGTACCGTTGCTTGTGGCGATTCGTACGCTTTTCGATATGTGAATCAA
GAGCGAGTTCAACAGAGTCTTGGAGGTGATGGGATTGAGAACTGCTCCGA
TAATGGGGCCATATGTGTTTTCGTTCGATCTGAAGGGCGAGTACTATTCC
TCTCGGAGCCTTACAGAAACGGTTCTGAACCGAATGAGTTCGTTGCCACC
CAAATGAGCTTCGATCCGGCACCTCACCTTCGGACGTTTGCAGAAAAGGC
AACAGACTCGTTTTTACATAGTGTCTCTGAAGAGCTTGAAGTTAGAAGAC
GAATGATCATGGGGTCACGGAACACTACATGTCGCTTTACCTCTCAAGGA
TCAGAACATACTAGGATTCCGACACCGTTGCTTGCTGTTTCCATTTGCGT
GTGGGTCATGTCGGTCGTTCTATTCTTCATTTGTGTTCCCTTTAAGAGGA
GGGTTTTCTTCGATATGAATAACCCCTTGCATTGGGCAAACCGGGCCCGC
CGCGCTGTTGATGATGAGGTGACCGCCAACTTTCTACAGTGCACAGAGAA
CAGTGATGGTCACCAAATCTACTTGACCGAATAA
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