Ggra6386.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6386.t1
Unique NameGgra6386.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length478
Homology
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BLAST of Ggra6386.t1 vs. uniprot
Match: A0A2V3IF70 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF70_9FLOR)

HSP 1 Score: 150 bits (378), Expect = 2.980e-35
Identity = 75/225 (33.33%), Postives = 125/225 (55.56%), Query Frame = 0 
Query:  251 VAQLSESQTNLFILLARNGNHLLPNKYVKNGIRWASKRDWVLCSIQENGHPWDLSDPSSVFDCLVHYSKL-NCKLTTDKSQNLKNLEFASKQLEVEWRQYERTRMLTLQNIGSHFLHSLMSAKDNEYRTIPVRGRHGLLYSNHSCALDSMLFIFPRLFWFIVKSKLHGGGQSGNLNALKAPGAILLYYVMNNLHEIGTGSSYQQLSHKTISAHLRVLTQDLASYF 474
            +  L+    N+F+LL++ G+ LLP    K   +W+S  +W L SIQ NG+P+++++  +VF+ L+   K+   +  + K+           Q E +W +Y + R L LQ  G   L  ++ ++  ++  +P++ R+G L   +SCA+D +LF+FP LFW + +  L G   +GN  AL  PG I+  YV   +  I +G  Y+   HK IS++LRVL QDL   +
Sbjct:  394 LVSLNLLSVNIFVLLSKQGDFLLPASKCKARFQWSSTSNWCLPSIQRNGYPYEINNWKAVFERLISLEKVPEYEYASAKAVVFGINSIRDVQKEKDWDEYVKWRFLLLQTSGKKILGRMLRSRSTQHVGVPLKDRYGPLNEKNSCAIDCLLFVFPHLFWELARFDLFGCDSNGNSLALSTPGCIVFQYVFQEMFRIASGHLYRSWVHKRISSYLRVLIQDLGELY 618
The following BLAST results are available for this feature:
BLAST of Ggra6386.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IF702.980e-3533.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000861_piloncontigtig00000861_pilon:25788..27221 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6386.t1Ggra6386.t1Gracilaria gracilis GNS1m malemRNAtig00000861_pilon 25788..27221 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6386.t1 ID=Ggra6386.t1|Name=Ggra6386.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=478bp
MNTLELQDPEVEKAVHLYNSASGDEENPAYSSDGFSDIHLSLEYNSDDCG
DIPWDLDTLAKDDSRTDAVDIVSSGKHLDSSKSSGSESKEHVEASTMRNS
ACVVDPISVNKKVTFADSARKLKLQPEHDRQDGIASSVKGSIERPDSVAI
VSSGKHLNSLKNAASEAQKHIETKTMQNSACISNPSSENKKVTFADSVHE
LKPQSEHDSQVDNANSVEESIDTFRDFFDNFRDNQARGFVTTGPPLPPLK
VAQLSESQTNLFILLARNGNHLLPNKYVKNGIRWASKRDWVLCSIQENGH
PWDLSDPSSVFDCLVHYSKLNCKLTTDKSQNLKNLEFASKQLEVEWRQYE
RTRMLTLQNIGSHFLHSLMSAKDNEYRTIPVRGRHGLLYSNHSCALDSML
FIFPRLFWFIVKSKLHGGGQSGNLNALKAPGAILLYYVMNNLHEIGTGSS
YQQLSHKTISAHLRVLTQDLASYFRNC*
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