Ggra6393.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6393.t1
Unique NameGgra6393.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length332
Homology
The following BLAST results are available for this feature:
BLAST of Ggra6393.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 124..163
e-value: 1.8E-4
score: 30.8
coord: 52..91
e-value: 0.025
score: 23.8
coord: 167..205
e-value: 2.4
score: 14.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 138..163
e-value: 0.011
score: 16.6
coord: 60..86
e-value: 0.0027
score: 18.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 60..85
score: 8.503359
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 131..172
score: 13.014815
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 22..87
e-value: 1.8E-12
score: 49.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 88..305
e-value: 8.6E-27
score: 95.7
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 91..212
coord: 27..209
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 131..163
score: 10.126507
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 25..259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000861_piloncontigtig00000861_pilon:139615..141154 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6393.t1Ggra6393.t1Gracilaria gracilis GNS1m malemRNAtig00000861_pilon 139615..141154 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6393.t1 ID=Ggra6393.t1|Name=Ggra6393.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=332bp
MVTCANQTALASVLSRRPFRNVQDCIALSSDGKRVASVHSISNAFQLYDT
LTGKPVGLPLVGHNKSVLCIAISSDGRRIASGSYDQARLVHTGKILDVAV
SGNGGRIVSLCYQRRSYVWDVVSGTVSPKALNGDTGTLTAVGISLDGNCI
VTGSNDRRVRVWNANQREMAMAPLTGHTQFIFGVVMSSDASRIISQSFTD
IRVWDAHTGEAIGTPIYPVYYRNYFRIEAVDEYGMNIVTQGLLAESSLWD
MAQGVCVLSQRDAAWQVTVDALALRWLPRRSWQPVRWRVNHSDGHNGSAI
TLATCDIPVENVDGGDVYFSTYFESRCNIVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf