Ggra8941.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8941.t1
Unique NameGgra8941.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length136
Homology
BLAST of Ggra8941.t1 vs. uniprot
Match: A0A2V3IRA8 (CCR4-NOT transcription complex subunit 11 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRA8_9FLOR)

HSP 1 Score: 163 bits (412), Expect = 8.250e-46
Identity = 90/121 (74.38%), Postives = 99/121 (81.82%), Query Frame = 0
Query:    1 MGMKGERGAELREIISKAIKSLIPEAQRMKVRQMLNDDPKLVHLCGITPQKLPDLVNNNASLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDIRLIKNKNIDL-QDLLVEVQGFCMGYC 120
            MGMKGERGAELR+IISKAIKS IPE Q MKV QMLNDDPKLVHLCGITPQKLP+LVNNNA+LAT+ILLKLMSS QMPKYLDALVNMDMNLQS+DI    +  + L +D +      CM  C
Sbjct:  260 MGMKGERGAELRDIISKAIKSPIPEKQIMKVCQMLNDDPKLVHLCGITPQKLPELVNNNAALATEILLKLMSSNQMPKYLDALVNMDMNLQSIDIVSRLSSTVQLPKDFMHTYINNCMQSC 380          
BLAST of Ggra8941.t1 vs. uniprot
Match: R7QEI6 (CCR4-NOT transcription complex subunit 11 n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QEI6_CHOCR)

HSP 1 Score: 147 bits (372), Expect = 1.520e-40
Identity = 83/182 (45.60%), Postives = 109/182 (59.89%), Query Frame = 0
Query:    1 MGMKGERGAELREIISKAIKSLIPEAQRMKVRQMLNDDPKLVHLCGITPQKLPDLVNNNASLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI-------------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQ 133
            MG+ GERG+E+RE+I KA KS +PEA++ K+   L +DPKLVHLCG+TPQKLPDLV NN+ LAT++LLKL+SS QMP+Y  AL NMD+ + SM +                                                  L++N  ID+QDL VE+Q FC+G+ RIREVADL+RSL+
Sbjct:  183 MGISGERGSEVRELIEKACKSPLPEAEQQKLLAQLEEDPKLVHLCGMTPQKLPDLVQNNSVLATELLLKLVSSQQMPQYYSALTNMDVTVHSMKVVEGLTNSVQLPTDFLNTYISHCIRSCESIPENEKYGRNHMVRFVCLFLKSLMRNNIIDVQDLFVEIQDFCIGHSRIREVADLFRSLK 364          
BLAST of Ggra8941.t1 vs. uniprot
Match: A0A5P1FG73 (CCR4-NOT transcription complex subunit 11 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FG73_ASPOF)

HSP 1 Score: 119 bits (299), Expect = 2.200e-29
Identity = 71/176 (40.34%), Postives = 101/176 (57.39%), Query Frame = 0
Query:    7 RGAELREIISKAIKSLIPEAQRMKVRQMLNDDPKLVHLCGITPQKLPDLVNNNASLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI-----------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL 135
            RGA LR++I+KA+KS +  AQ+ +V   LN+DPKLV+ CGITP+KLP+LV NN  +A ++L+KLM+ST++ +Y   LVNMDM+L SM++                                                LI+NK I++QDL +EVQ FC+ + RIRE A L+R L+ L
Sbjct:  257 RGAALRDLIAKALKSPLMPAQQEQVLLELNNDPKLVYHCGITPRKLPELVENNPHIAVEVLIKLMNSTEIAEYFTVLVNMDMSLHSMEVVNRLTTSVELPTEFVHMYITNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEVQAFCIEFSRIREAAGLFRLLKTL 432          
BLAST of Ggra8941.t1 vs. uniprot
Match: A0A7S1CGK3 (CCR4-NOT transcription complex subunit 11 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CGK3_9STRA)

HSP 1 Score: 114 bits (286), Expect = 4.940e-29
Identity = 71/182 (39.01%), Postives = 99/182 (54.40%), Query Frame = 0
Query:    1 MGMKGERGAELREIISKAIKSLIPEAQRMKVRQMLNDDPKLVHLCGITPQKLPDLVNNNASLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI-----------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL 135
            MG    RGA +RE+++KA  + +   Q+ +V + L  DPKLV+ CG++PQ+LPDLV NN  +A + LLKLM STQ+ +YL ALVNMDM+L SM++                                                LI+NK I++QDL +EVQ FC+ + RIRE A L+R L+ L
Sbjct:   52 MGEDTSRGAAVRELMAKACTTALQADQQEQVLKELEADPKLVYHCGLSPQRLPDLVENNPMVAIECLLKLMPSTQISEYLSALVNMDMSLHSMEVVNRLTTAVDLPPEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEVQAFCIEFSRIREAAGLFRLLKTL 233          
BLAST of Ggra8941.t1 vs. uniprot
Match: A0A7S2FYZ9 (CCR4-NOT transcription complex subunit 11 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYZ9_9STRA)

HSP 1 Score: 115 bits (288), Expect = 8.540e-29
Identity = 71/176 (40.34%), Postives = 97/176 (55.11%), Query Frame = 0
Query:    7 RGAELREIISKAIKSLIPEAQRMKVRQMLNDDPKLVHLCGITPQKLPDLVNNNASLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI-----------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL 135
            +GAE+RE++SKA K  +   Q+ +V   L  D +LV+ CG+TPQKLPDLV NN  +A + LLKLMSS+Q+ +YL ALVNMDM+L SM++                                                LI+NK I++QDL +EVQ FC+ + RIRE A L+R L+ L
Sbjct:  116 KGAEVRELMSKAFKGPLIPTQQQQVLAELEADSRLVYHCGLTPQKLPDLVENNPMIAIECLLKLMSSSQLNEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEVQAFCIEFSRIREAAGLFRLLKTL 291          
BLAST of Ggra8941.t1 vs. uniprot
Match: A0A7S1RHL5 (CCR4-NOT transcription complex subunit 11 n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RHL5_ALECA)

HSP 1 Score: 115 bits (287), Expect = 1.650e-28
Identity = 67/175 (38.29%), Postives = 98/175 (56.00%), Query Frame = 0
Query:    8 GAELREIISKAIKSLIPEAQRMKVRQMLNDDPKLVHLCGITPQKLPDLVNNNASLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI-----------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL 135
            G+E+RE+I+KA+K+ +P +Q+  +   L  D KLV+ CG+TP+KLPDLV NN ++A ++LLKLMSS+Q+  Y   LVNM+M+L SM++                                                LI+NK I++QDL +EVQ FC+ + RIRE A L+R L+ L
Sbjct:  129 GSEVRELIAKAVKAPLPSSQQQVIFSGLEQDAKLVYHCGLTPRKLPDLVENNPAIAIEVLLKLMSSSQITGYFSVLVNMEMSLHSMEVVNRLTTAVDLPTEFVHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEVQAFCIEFSRIREAASLFRLLKTL 303          
BLAST of Ggra8941.t1 vs. uniprot
Match: D8SCP9 (CCR4-NOT transcription complex subunit 11 (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SCP9_SELML)

HSP 1 Score: 113 bits (282), Expect = 4.570e-28
Identity = 66/177 (37.29%), Postives = 99/177 (55.93%), Query Frame = 0
Query:    7 RGAELREIISKAIKSLIPEAQRMKVRQMLNDDPKLVHLCGITPQKLPDLVNNNASLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI------------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL 135
            RGA +RE+I++A+K  +  AQ+ +V Q L  DPKLV+ CG+TP++LP+LV NN  +A ++LLKLM+S Q  +Y +ALV+MDM+L SM++                                                 LI+N+ I++ DL +EVQ FC+ + RIRE A L+R L++L
Sbjct:   97 RGAAVRELIARALKGALAPAQQQQVLQELESDPKLVYHCGLTPRRLPELVENNPIIAVEVLLKLMNSVQSSEYFNALVSMDMSLHSMEVVNRLTTAVQIPVEYIHAYINNCISSCENMKQDKYMQNRLVRLVCVFLTSLIRNRIINVHDLFIEVQAFCIEFSRIREAAGLFRLLKSL 273          
BLAST of Ggra8941.t1 vs. uniprot
Match: A0A6S8CSG9 (CCR4-NOT transcription complex subunit 11 n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8CSG9_9STRA)

HSP 1 Score: 115 bits (289), Expect = 8.820e-28
Identity = 71/176 (40.34%), Postives = 96/176 (54.55%), Query Frame = 0
Query:    7 RGAELREIISKAIKSLIPEAQRMKVRQMLNDDPKLVHLCGITPQKLPDLVNNNASLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI-----------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL 135
            RGAE+RE+++KA K  +   Q+  V Q L  DPKLV+ CG+TPQ+LPDLV NN  +A + LLKLM S+Q+ +YL ALVNMDM+L SM++                                                LI+N  ID++DL +EVQ FC+ + RIRE A L+R L+ L
Sbjct:  304 RGAEVRELMTKAFKGPLVAVQQKHVLQELEADPKLVYHCGLTPQRLPDLVENNPVIAIECLLKLMYSSQITEYLSALVNMDMSLHSMEVVNRLTTAVNLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNNIIDVKDLFIEVQAFCIEFSRIREAAGLFRLLKTL 479          
BLAST of Ggra8941.t1 vs. uniprot
Match: A0A7S2JRA7 (CCR4-NOT transcription complex subunit 11 n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2JRA7_9DINO)

HSP 1 Score: 114 bits (286), Expect = 1.190e-27
Identity = 67/175 (38.29%), Postives = 98/175 (56.00%), Query Frame = 0
Query:    8 GAELREIISKAIKSLIPEAQRMKVRQMLNDDPKLVHLCGITPQKLPDLVNNNASLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI-----------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL 135
            G+E+RE+I+KA+K+ +P +Q+  +   L  D KLV+ CG+TP+KLPDLV NN ++A ++LLKLMSS+Q+  Y   LVNM+M+L SM++                                                LI+NK I++QDL +EVQ FC+ + RIRE A L+R L+ L
Sbjct:  234 GSEVRELIAKAVKAPLPSSQQTVIFSGLEQDAKLVYHCGLTPRKLPDLVENNPAIAIEVLLKLMSSSQITGYFSVLVNMEMSLHSMEVVNRLTTAVDLPTEFVHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEVQAFCIEFSRIREAASLFRLLKTL 408          
BLAST of Ggra8941.t1 vs. uniprot
Match: A0A0D6R6K0 (CCR4-NOT transcription complex subunit 11 n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R6K0_ARACU)

HSP 1 Score: 114 bits (284), Expect = 2.890e-27
Identity = 68/176 (38.64%), Postives = 97/176 (55.11%), Query Frame = 0
Query:    7 RGAELREIISKAIKSLIPEAQRMKVRQMLNDDPKLVHLCGITPQKLPDLVNNNASLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI-----------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL 135
            RGA +R++I +A+K  +P AQ+ KV   L  DPKLV+ CGITP +LP+LV NN  +A ++LLK+M+S Q+ +Y   LVNMDM+L SM++                                                LIK+K I++QDL +EVQ FC+ + RIRE A L+R L++L
Sbjct:  257 RGAAVRDLIIRALKGALPPAQQQKVVLELEADPKLVYHCGITPNRLPELVENNPLIAVEVLLKMMNSIQIQEYFKVLVNMDMSLHSMEVVNRLTSAVDIPTHFIHVYISNCIQSCENIKDKYMQNRLVRLVCVFLTSLIKHKIINVQDLFIEVQAFCIEFSRIREAATLFRLLKSL 432          
The following BLAST results are available for this feature:
BLAST of Ggra8941.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRA88.250e-4674.38CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]
R7QEI61.520e-4045.60CCR4-NOT transcription complex subunit 11 n=2 Tax=... [more]
A0A5P1FG732.200e-2940.34CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]
A0A7S1CGK34.940e-2939.01CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]
A0A7S2FYZ98.540e-2940.34CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]
A0A7S1RHL51.650e-2838.29CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]
D8SCP94.570e-2837.29CCR4-NOT transcription complex subunit 11 (Fragmen... [more]
A0A6S8CSG98.820e-2840.34CCR4-NOT transcription complex subunit 11 n=2 Tax=... [more]
A0A7S2JRA71.190e-2738.29CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]
A0A0D6R6K02.890e-2738.64CCR4-NOT transcription complex subunit 11 n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019312CCR4-NOT transcription complex subunit 11PFAMPF10155CNOT11coord: 96..132
e-value: 1.1E-8
score: 35.2
coord: 56..95
e-value: 2.1E-7
score: 31.1
IPR019312CCR4-NOT transcription complex subunit 11PANTHERPTHR15975UNCHARACTERIZEDcoord: 4..94
coord: 97..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:875158..875817 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8941.t1Ggra8941.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 875158..875817 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8941.t1 ID=Ggra8941.t1|Name=Ggra8941.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=136bp
MGMKGERGAELREIISKAIKSLIPEAQRMKVRQMLNDDPKLVHLCGITPQ
KLPDLVNNNASLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDIRLIKN
KNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019312CNOT11