Ggra8969.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8969.t1
Unique NameGgra8969.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length454
Homology
BLAST of Ggra8969.t1 vs. uniprot
Match: A0A2V3J6I6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6I6_9FLOR)

HSP 1 Score: 187 bits (475), Expect = 2.130e-51
Identity = 124/387 (32.04%), Postives = 198/387 (51.16%), Query Frame = 0
Query:   71 LEKETLALQRLLIDDYLEFHKKARLKAEMSSSEHAVIRTLVFKGKLWA-GLGDRLRGVVQAYLLAVATRRVLLIDWEKPFPLHHVLDSDAGGSNFSYDEFVFAHSQRKANGRRDSIHIREASFSDLKVVAGNISTVFMVVNRFPEWKLFADLWRSHPKLAISFQLWSLREVNEKVRPADAYSMILGAVLRTSEQLRWSVDQVRRGQNACFPCVLCFNHEQKEAQVMR-YISIHARLGSAIESDSPQRFNFSTHGLRMREVAKCMAWHAKAAAKGVGEDVKG---FFIASDTREMRYLLKDELRLCSGCDRDTRVMHGGCAVRHVRELQSDSEQDHDLFMSTFVELAMLAGGEAMISLKSGYADLAVWMGAIRLHKQLSFEQCALELQ 452
            +++   AL+R+LID Y+ +H     K      + + +RTLVF G     GLGDRLRG++ AYL AV + R+LLI W+ PFPL  VL +    SN++YD  +F    ++  G  D +++++A+  ++ +  G    + +     P         R  P+L  S  +  +  +  +  P   + +I  A+LR S  LR  + ++    N   P  L      K     + +IS+HARLG  + ++  +RF     G  M  VA+CMA  A   AK   E+V     F++A+DT + R + K  L      DR  +VM+G   ++HV+E+Q  +  D  LF  TF++L +++ GEA++   SG+ +LAVWMG I      +   C L LQ
Sbjct:    1 MQESLQALKRVLIDRYVLWHHSTVSKVREGELDGSSVRTLVFVGNEGRHGLGDRLRGMLFAYLAAVFSNRLLLIHWQDPFPLSTVLVNSVH-SNYTYDASLFPSRTKEEGGEEDKVYVKKATLMEMHLFTGIHRMLVLECEPRPSLDDVFKAMRKFPRLQTSIAMKKILPLRRRPHPNQFFPLIFKALLRPSAALRKMMAEIIDKHNRFAPSRLWKQGPLKRIDTGKPFISVHARLGYGV-AEYIKRFKSQMSGRTMESVAECMAQIAMRLAKR--ENVTHPPRFYLATDTEQFRLMFKTALMRM---DRQAKVMYGTWVMKHVKEMQGHTTDDLRLFRYTFMDLYIMSKGEAILRSNSGFPNLAVWMGGIPSQMGFNINDCPLVLQ 380          
BLAST of Ggra8969.t1 vs. uniprot
Match: A0A0L0FE47 (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FE47_9EUKA)

HSP 1 Score: 59.3 bits (142), Expect = 7.020e-6
Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 0
Query:   83 IDDYLEFHKKARLKAEMSSSEHAVIRTLVFKGKLWAGLGDRLRGVVQAYLLAVATRRVLLIDWEKPFPLHHVLD 156
            I DY +FH +     + ++    ++ T   +     G+GDRL G+V  ++LAV+T RVL+IDW  PFPL+  L+
Sbjct:   62 IIDYSKFHNEQVQNPQQNTKY--LVYTCTHQRSFCGGIGDRLSGIVSLFMLAVSTNRVLVIDWNTPFPLYESLN 133          
The following BLAST results are available for this feature:
BLAST of Ggra8969.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6I62.130e-5132.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A0L0FE477.020e-637.84Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11340coord: 105..153
e-value: 1.1E-5
score: 27.2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..453
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..45
NoneNo IPR availableTMHMMTMhelixcoord: 23..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:998415..999776 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8969.t1Ggra8969.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 998415..999776 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8969.t1 ID=Ggra8969.t1|Name=Ggra8969.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=454bp
MPFRRHAKNSKVGENGSTCFRTLFRNATLIWAILLVHSFFAYGGVEHASE
PQLTIGLPFENATIPVKPASLEKETLALQRLLIDDYLEFHKKARLKAEMS
SSEHAVIRTLVFKGKLWAGLGDRLRGVVQAYLLAVATRRVLLIDWEKPFP
LHHVLDSDAGGSNFSYDEFVFAHSQRKANGRRDSIHIREASFSDLKVVAG
NISTVFMVVNRFPEWKLFADLWRSHPKLAISFQLWSLREVNEKVRPADAY
SMILGAVLRTSEQLRWSVDQVRRGQNACFPCVLCFNHEQKEAQVMRYISI
HARLGSAIESDSPQRFNFSTHGLRMREVAKCMAWHAKAAAKGVGEDVKGF
FIASDTREMRYLLKDELRLCSGCDRDTRVMHGGCAVRHVRELQSDSEQDH
DLFMSTFVELAMLAGGEAMISLKSGYADLAVWMGAIRLHKQLSFEQCALE
LQH*
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