Ggra8958.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8958.t1
Unique NameGgra8958.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length400
Homology
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BLAST of Ggra8958.t1 vs. uniprot
Match: A0A2V3INM1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INM1_9FLOR)

HSP 1 Score: 122 bits (305), Expect = 2.550e-26
Identity = 88/250 (35.20%), Postives = 117/250 (46.80%), Query Frame = 0 
Query:  120 LSMAFFDQELKLLIDNNFRLSHVPRDESFLEAVRISEQISCTLAQQHQEPLALKHIVPS-----------------------GQESQFLTSLDVEPELDISNSSTSLQWISDLQKFLGKV---------------------------RTPVLANFQRRTYFNMSEHDERRAPTAMWHFDIANSSQHAEELTELS--QAQSHVAYGTATDTRRYSSYYSNRGVHSSPGDTTVALNFGFQTRTNYPFRKTYR 317
            LS  FFDQEL  L D  FRL+H PR++S ++A  + EQ     +++      +K +V                           +SQ  +SL       I  SS     IS+L  F+  +                           R+  + NFQRRTY NMSE DERR  TA W  DI   +  +  L + S  +  SHVAY  A++ R +S Y++ R VH +P DTT ALNFGFQ RTNYPFR T+R
Sbjct:  707 LSAHFFDQELHELFDEKFRLTHAPREQSMIKATALCEQFPSPKSERQSPTSLIKGLVNRTGPLFSLSEPDAHLHYSTTCTHRSDKSQHASSLSNSEPHTIFPSSLYNSEISELSPFIRDLPPGRRDVTESPLPSESKNGIQELPAVGRSSSVNNFQRRTYLNMSELDERRYATAAWQPDITCYTPLSNGLIQPSGQRQSSHVAYAFASNKRAHS-YHTGRAVHCAPTDTTTALNFGFQRRTNYPFRTTHR 955
The following BLAST results are available for this feature:
BLAST of Ggra8958.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3INM12.550e-2635.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:972695..973894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8958.t1Ggra8958.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 972695..973894 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8958.t1 ID=Ggra8958.t1|Name=Ggra8958.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=400bp
MNKSIESGRWHFREALVKHQDGAETHTDSLASPTVQRDTGSDSRARRNLL
QRDMLPHSSSLRLNSLYPYIPKLTHSEFAAIGNPSASLSGQHEQSPCSLD
AQFSNILSPSHGVTPSLTLLSMAFFDQELKLLIDNNFRLSHVPRDESFLE
AVRISEQISCTLAQQHQEPLALKHIVPSGQESQFLTSLDVEPELDISNSS
TSLQWISDLQKFLGKVRTPVLANFQRRTYFNMSEHDERRAPTAMWHFDIA
NSSQHAEELTELSQAQSHVAYGTATDTRRYSSYYSNRGVHSSPGDTTVAL
NFGFQTRTNYPFRKTYRHSHKRGEVSHETRPISPAGDRSHDALCSAEFSA
QALIPACQGALPFNAIETGSTLRDASRAGDKAVVYSISEEGKLIGRKDK*
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