Ggra8894.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8894.t1
Unique NameGgra8894.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length279
Homology
BLAST of Ggra8894.t1 vs. uniprot
Match: A0A2V3J4C3 (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4C3_9FLOR)

HSP 1 Score: 385 bits (988), Expect = 1.920e-132
Identity = 192/279 (68.82%), Postives = 228/279 (81.72%), Query Frame = 0
Query:    1 MGGTASRPSELSTSEDHQSTSDATLPQESYSTLDIDDRNNSSTEHIVPTEFKWNNGGYSVYITGAWDDWSRKTQLSRTHPAEFATVLALPVGTFQYKFIVDGNWKHNPLDPTARDSHGNLNNVITITPQPPEYDSNEPLNIDDLSRSPVESYNYTLLAEEDHTTEAPSLPRILANAPIDHKLRSNTSGTDFVRLNHLFLINSDSSYGSAQTRTMAIERRFKDKVVTTILVTPKGRVGP-DTMSEQQFGGTRSEPIPIPTGSVQSMSESQSLLLDALNNV 278
            MGGTASR +E+S+ +  Q + DA +P E  + L IDDRNN+S EHIVPTEFKW  GGYSVY+TGAWDDW  +TQLSRT P EFATVLALPVGTFQYKFIVDGNW+H+P DPT RD +GNLNNVI +TPQ PEYDSN+PL+ +  +RSPVESY+Y+ L EEDHTTE PSLPRILA+APID +  S  SGTDFVRLNH+FLI+SDS+YG  QTR++A E+RFK+K++TTILVT KGRV   + MS+Q + G RS+PIPI    +Q MSESQSLLLDALNNV
Sbjct:    1 MGGTASRATEISSPDYPQGSGDAIVPPERRAALAIDDRNNNSIEHIVPTEFKWKLGGYSVYVTGAWDDWRHRTQLSRTTPVEFATVLALPVGTFQYKFIVDGNWRHSPSDPTGRDPNGNLNNVIVVTPQLPEYDSNDPLDTETQARSPVESYDYSTLPEEDHTTEPPSLPRILASAPIDRRSHSFMSGTDFVRLNHMFLIDSDSTYGPGQTRSLATEQRFKEKIITTILVTTKGRVSHHEGMSQQSYTGRRSQPIPIQEAPMQPMSESQSLLLDALNNV 279          
BLAST of Ggra8894.t1 vs. uniprot
Match: R7Q5V1 (AMPKBI domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5V1_CHOCR)

HSP 1 Score: 277 bits (709), Expect = 7.960e-88
Identity = 149/279 (53.41%), Postives = 189/279 (67.74%), Query Frame = 0
Query:    1 MGGTASRPSELSTSEDHQSTSDATLPQESYSTLDIDDRNNSSTEHIVPTEFKWNNGGYSVYITGAWDDWSRKTQLSRTHPAEFATVLALPVGTFQYKFIVDGNWKHNPLDPTARDSHGNLNNVITITPQPPEYDSNEPLNIDDLSRSPVESYNYTLLAEEDHTTEAPSLPRILANAPIDHKLRSNTSGTDFVRLNHLFLINSDSSYGSAQTRTMAIERRFKDKVVTTILVTPKGRVGPDTMSE--QQFGGTRSEPIPIPTGSVQSMSESQSLLLDALNN 277
            MG  ASR  E + +   Q ++D  LP+ S S L  DDRN SS  +I  TEF W+ GG SVY+TGAWDDW  K  LSRT P +F  VLALPVGTFQYKFIVDGNWKH+P  PT RD HGNLNN++ +    PEYDSN  +   D+  SPVESY++++L +EDHTTE P+LPR+LA+AP+D        G DFVR NH+F  NSD  YG+ +  T+A E R+K+K++TTIL+    +   D +S   Q +  TR+ P+PI   + QSM ESQSL+LDALNN
Sbjct:    1 MGVAASRADEFAPT---QESTDGDLPESSAS-LSNDDRNGSSLANITITEFIWSFGGSSVYVTGAWDDWRVKAALSRTSPTDFTAVLALPVGTFQYKFIVDGNWKHSPALPTERDQHGNLNNIVVVKANVPEYDSNVQIYPQDVPNSPVESYDFSILPQEDHTTEPPTLPRLLASAPLDAMTDEPRHGADFVRFNHMFSTNSDIPYGTHEISTLASETRYKNKIITTILIASTNKAQ-DRLSVPVQGYRQTRTHPVPI---THQSMGESQSLILDALNN 271          
BLAST of Ggra8894.t1 vs. uniprot
Match: A0A7S3EJW8 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJW8_9RHOD)

HSP 1 Score: 126 bits (316), Expect = 8.380e-32
Identity = 79/192 (41.15%), Postives = 110/192 (57.29%), Query Frame = 0
Query:   47 VPTEFKWNNGGYSVYITGAWDDWSRKTQLSRTHPAEFATVLALPVGTFQYKFIVDGNWKHNPLDPTARDSHGNLNNVITITPQPPEYDSNE-PLNIDDLSRSPVESYNYTLL-AEEDHTTEAPSLPRILANAPIDHKLRSN--TSGTDFVRLNHLFLINSDSSYGSAQTRT-MAIERRFKDKVVTTILVTPK 233
            VPT F WN GG  +Y+TGAWD W  K  LSR    EF  VL LPVG FQYK+IVDG W+ +   PT RD HGNLNNV+ +  Q   +D NE P   + LS  P+E+Y+ ++   +E   +E P LP +  + PI +K R          V + HL   N+ + +   +  T + I RR++ K VTT++ +P+
Sbjct:   26 VPTTFSWNLGGQQIYVTGAWDQWQTKQPLSR-FGNEFTAVLLLPVGKFQYKYIVDGEWRPHREQPTERDEHGNLNNVVEVVEQKSAFDPNEAPTAAEPLS--PLETYDDSVPNTDELRMSEIPELPELYRD-PILNKERGGGQLDIPSHVCVGHL---NTATRHFEDENITVLGITRRWRGKYVTTVIYSPR 210          
BLAST of Ggra8894.t1 vs. uniprot
Match: A0A5J4Z6T7 (SNF1-related protein kinase regulatory subunit beta-2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6T7_PORPP)

HSP 1 Score: 127 bits (320), Expect = 3.190e-31
Identity = 72/232 (31.03%), Postives = 114/232 (49.14%), Query Frame = 0
Query:   42 STEHIVPTEFKWNNGGYSVYITGAWDDWSRKTQLSRTHPAEFATVLALPVGTFQYKFIVDGNWKHNPLDPTARDSHGNLNNVITITPQPPEYDSNEPLNIDDLSRSPVESYNYTLLAEEDHTTEAPSLPRILANAPIDHK----------------LRSNTSGTDF---------------------VRLNHLFLINSDSSYGSAQTRTMAIERRFKDKVVTTILVTPKGRV 236
            S  +IVPT F W++GG  V++TGAWD W  K Q+ R    E+  +L+L  G FQYKFIVDG W+H    PT RD HGN+NN++ + P   E+D  +         SP+ESY++++ A E++  + P LP    +  ++                  +RS  SG D                      V + HL+   +  ++   + + + I RR++DK +T +L T   ++
Sbjct:   97 SLGNIVPTVFTWSHGGNQVFVTGAWDHWQSKAQMHRAGN-EYMVILSLQCGRFQYKFIVDGEWRHCASQPTERDEHGNVNNMVEVRPHVSEFDLPDIQTGLRRPPSPIESYDFSMPAPEEYAIDPPQLPPHYHSVVLNQSASSVAAQQKNMHATAVVRSPASGVDLAFIQNSGELPPDASTCEVPNHVSIRHLY--TASKTHAEEEVQVVGITRRYRDKFITMVLYTHPNKI 325          
BLAST of Ggra8894.t1 vs. uniprot
Match: C1FEH4 (Carbohydrate-binding module family 48 protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FEH4_MICCC)

HSP 1 Score: 111 bits (278), Expect = 3.520e-26
Identity = 70/199 (35.18%), Postives = 95/199 (47.74%), Query Frame = 0
Query:   43 TEHIVPTEFKWNNGGYSVYITGAWDDWSRKTQLSRTHPAEFATVLALPVGTFQYKFIVDGNWKHNPLDPTARDSHGNLNNVITITPQPPEYDSNEPLNIDDLSR-----SPVESYNYTLLAEEDHTTEAPSLPR----ILANAPIDHKLRSNTSGTDFVRLNHLFLINSDSSYGSAQTRTMAIERRFKDKVVTTILVTP 232
            T  +VP    W  GG  V + G++D+W  +  L R+   EFA V  LP G +QYKFIVDG WK+ P  P   D  GN+NNV+ +    PE        +D L       SP ESYN  L + +D   + P+ P      L N P      +       V LNH++   +D +   A T+ M    R++ K VT ILV P
Sbjct:   27 TPTLVPVAISWTQGGSIVEVEGSFDNWQSRQALHRSGTREFAIVKMLPPGVYQYKFIVDGEWKYAPDQPAMYDEMGNVNNVLEVQEYIPEI-------LDSLDSFLAPSSPTESYNNILFSPDDFAKDPPACPPHLHLTLLNMPQIPDAPNLLPRPQHVVLNHIY---NDKNMTLAGTQVMGTTHRYRSKYVTVILVKP 215          
BLAST of Ggra8894.t1 vs. uniprot
Match: C1MGX7 (Carbohydrate-binding module family 48 protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MGX7_MICPC)

HSP 1 Score: 107 bits (266), Expect = 2.670e-24
Identity = 67/201 (33.33%), Postives = 92/201 (45.77%), Query Frame = 0
Query:   41 SSTEHIVPTEFKWNNGGYSVYITGAWDDWSRKTQLSRTHPAEFATVLALPVGTFQYKFIVDGNWKHNPLDPTARDSHGNLNNVITITPQPPEYDSNEPLNIDDLSR-----SPVESYNYTLLAEEDHTTEAPSLPR----ILANAPIDHKLRSNTSGTDFVRLNHLFLINSDSSYGSAQTRTMAIERRFKDKVVTTILVTP 232
            S    +VP    WN GG  V + G++D+W  +  L R+   EFA V  LP G +QYKFIVDG WK+ P  P   D  GN+NNV+ +    PE        +D L       SP ESY+  L  ++D   E P+ P      L N P      +       V LNH++   +D +        M    R++ K VT + V P
Sbjct:   37 SEPNTLVPVAINWNQGGTVVEVEGSFDNWQSRQALHRSGNREFAVVKMLPPGVYQYKFIVDGEWKYAPDQPAMYDEMGNVNNVLEVQEYVPEI-------LDSLDSFLAPSSPPESYDCALFTQDDFAKEPPACPPHLHLTLLNMPQIPDAPNLLPRPQHVVLNHMY---NDRTKQQRGQHVMGTTHRYRSKYVTVVFVKP 227          
BLAST of Ggra8894.t1 vs. uniprot
Match: A0A2P6UZZ5 (SNF1-related kinase regulatory subunit beta-2 isoform A n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UZZ5_9CHLO)

HSP 1 Score: 107 bits (268), Expect = 5.890e-24
Identity = 73/230 (31.74%), Postives = 108/230 (46.96%), Query Frame = 0
Query:   46 IVPTEFKWNNGGYSVYITGAWDDWSRKTQLSRTHPAEFATVLALPVGTFQYKFIVDGNWKHNPLDPTARDSHGNLNNVITITPQPPEYDSNEPLNIDDLSRSPVESYNYTLLAEEDHTTEAPSLPR----ILANAPIDHKLRSNTSGTDFVRLNHLFLINSDSSYGSAQTRTMAIERRFKDKVVTTILVTPKGRVGPDTMSEQQFGGTRSEPIPIPTGSVQSMSESQSLL 271
            +VPT   W +GG  V + G++D+W+++  + R+   +F  V  LP G +QYKFIVDG W+H+P  P+  D  GN+NNV+ +    PE  + E L   D   SP  SYN    A ED   E P +P      L N P      +       V LNHL+L    +S        +    R++ K VTT++  PK RV   T        +    +  P  S    S++  ++
Sbjct:   74 LVPTVIVWAHGGSHVELEGSFDNWTQRYTMQRSGK-DFTLVKLLPPGVYQYKFIVDGQWRHDPNLPSMYDDMGNINNVLEVQEYVPE--NLESLVGFDPPPSPPSSYNSAPPATEDFLKEPPLMPPQLQLSLLNVPPAMDAIAALPRPQHVILNHLYLQRMTTS---THAMVVGTTHRYRSKYVTTVMYKPKKRVQHPTQQPASSDASMHGMVGTPRASQGGTSQTSPMV 297          
BLAST of Ggra8894.t1 vs. uniprot
Match: A0A830AZN1 (Snf1-related protein kinase regulatory subunit beta-2 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830AZN1_9LAMI)

HSP 1 Score: 107 bits (266), Expect = 9.480e-24
Identity = 66/196 (33.67%), Postives = 102/196 (52.04%), Query Frame = 0
Query:   44 EHIVPTEFKWNNGGYSVYITGAWDDWSRKTQLSRTHPAEFATVLALPVGTFQYKFIVDGNWKHNPLDPTARDSHGNLNNVITITPQPPEYDSNEPLNIDDLS-----RSPVESYNYTLLAEEDHTTEAPSLP----RILANAPIDH-KLRSNTSGTDFVRLNHLFLINSDSSYGSAQTRTMAIERRFKDKVVTTIL 229
            E  +PT   W+ GG  V++ G+WD+W  +  L R+   +F  +  +P G +QY+F+VDG W+++P  P  RD  GN  N++ +    PE       +ID +S     +SPV SYN + L +ED + E P +P      L NAP  H +++   S    V LNHL++ + D +  S     +    RF  K VT +L
Sbjct:   98 ERSIPTMITWSYGGNEVFVEGSWDNWKSRKPLQRSGK-DFTIMNVIPSGVYQYRFLVDGEWRYSPDHPWDRDDSGNAYNILDLQDYVPE-------DIDSISGFEPPQSPVSSYNNSQLGQEDFSKEPPIVPPHLSSTLLNAPSTHMEIQPPYSRPQHVVLNHLYM-HKDKNRPSVVA--LGSTNRFLSKYVTVVL 282          
BLAST of Ggra8894.t1 vs. uniprot
Match: A0A022R0S6 (AMPKBI domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022R0S6_ERYGU)

HSP 1 Score: 106 bits (265), Expect = 1.090e-23
Identity = 67/194 (34.54%), Postives = 100/194 (51.55%), Query Frame = 0
Query:   41 SSTEHIVPTEFKWNNGGYSVYITGAWDDWSRKTQLSRTHPAEFATVLALPVGTFQYKFIVDGNWKHNPLDPTARDSHGNLNNVITITPQPPEYDSNEPLNIDDLSRSPVESYNYTLLAEEDHTTEAPSLPR----ILANAPIDH-KLRSNTSGTDFVRLNHLFLINSDSSYGSAQTRTMAIERRFKDKVVTTIL 229
            +S E  +PT   W+ GG  V + G+WDDW  +  L+R+   +F  +  LP G +QY+FIVDG W+H+P  P  +D  GN  NV+ +    PE    + ++  +  +SP  +YN T L +ED   E P +P      L NAP  H ++    S    V LNHL++ + D +  S     +    RF  K VT +L
Sbjct:   85 TSNEQGIPTMITWSYGGKEVAVEGSWDDWKTRRPLARSGK-DFTIMKVLPSGVYQYRFIVDGQWRHSPDQPWEQDESGNSFNVLDLQDYVPE--DTDSISGFEPPQSPDSTYNNTQLVQEDFAKEPPIVPPHLTLTLLNAPSSHMEIPPPHSRPQHVVLNHLYM-HRDRTQPSVVA--LGSTNRFLSKYVTVVL 272          
BLAST of Ggra8894.t1 vs. uniprot
Match: A0A061RNQ7 (5'-AMP-activated protein kinase, regulatory beta subunit n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RNQ7_9CHLO)

HSP 1 Score: 106 bits (264), Expect = 1.350e-23
Identity = 61/195 (31.28%), Postives = 102/195 (52.31%), Query Frame = 0
Query:   46 IVPTEFKWNNGGYSVYITGAWDDWSRKTQLSRTHPAEFATVLALPVGTFQYKFIVDGNWKHNPLDPTARDSHGNLNNVITITPQPPEYDSNEPLNIDDLS--RSPVESYNYTLLAEEDHTTEAPSLPRILANAPIDHKLRSNTSGTDFVRLNHLFL--INSDSSYGSAQTRTMAIERRFKDKVVTTILVTPKGRV 236
            + PT F W++GG  V + G++D+W+ + ++ R+   +F  V  LP G +QYKFIVDG WK++P  P   D  GN+NNV+ +     EY  +E   +       SP ESY+  L   +D T   P++P  L  + ++ +  ++       R  H+ L  + S +++ +     M    R++ K VTT++  P  RV
Sbjct:   78 LFPTVFYWSHGGSHVEVQGSFDNWTTRQEMQRSGK-DFTIVKLLPPGVYQYKFIVDGEWKYDPEQPAMFDEIGNVNNVLEVQ----EYTPDEYSTVQGFEPPASPPESYDCPLPMADDFTKAPPAMPPQLNLSLLNVQAPAHADNKSLPRPQHVILDHLYSQTAHTTVDAVVMGATMRYRSKYVTTVIYKPSKRV 267          
The following BLAST results are available for this feature:
BLAST of Ggra8894.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4C31.920e-13268.82SNF1-related protein kinase regulatory subunit bet... [more]
R7Q5V17.960e-8853.41AMPKBI domain-containing protein n=1 Tax=Chondrus ... [more]
A0A7S3EJW88.380e-3241.15Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z6T73.190e-3131.03SNF1-related protein kinase regulatory subunit bet... [more]
C1FEH43.520e-2635.18Carbohydrate-binding module family 48 protein n=1 ... [more]
C1MGX72.670e-2433.33Carbohydrate-binding module family 48 protein n=1 ... [more]
A0A2P6UZZ55.890e-2431.74SNF1-related kinase regulatory subunit beta-2 isof... [more]
A0A830AZN19.480e-2433.67Snf1-related protein kinase regulatory subunit bet... [more]
A0A022R0S61.090e-2334.54AMPKBI domain-containing protein n=1 Tax=Erythrant... [more]
A0A061RNQ71.350e-2331.285'-AMP-activated protein kinase, regulatory beta s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 39..129
e-value: 4.4E-26
score: 92.6
IPR032640AMP-activated protein kinase, glycogen-binding domainPFAMPF16561AMPK1_CBMcoord: 47..129
e-value: 1.2E-29
score: 102.3
NoneNo IPR availableGENE3D6.20.250.60coord: 138..232
e-value: 1.2E-6
score: 30.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..263
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 48..126
e-value: 8.83521E-31
score: 108.07
IPR043554SNF1-related protein kinase regulatory subunit betaPANTHERPTHR46316SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1coord: 19..232
IPR037256ASC domain superfamilySUPERFAMILY160219AMPKBI-likecoord: 142..232
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 46..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:673555..674534 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8894.t1Ggra8894.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 673555..674534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8894.t1 ID=Ggra8894.t1|Name=Ggra8894.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=279bp
MGGTASRPSELSTSEDHQSTSDATLPQESYSTLDIDDRNNSSTEHIVPTE
FKWNNGGYSVYITGAWDDWSRKTQLSRTHPAEFATVLALPVGTFQYKFIV
DGNWKHNPLDPTARDSHGNLNNVITITPQPPEYDSNEPLNIDDLSRSPVE
SYNYTLLAEEDHTTEAPSLPRILANAPIDHKLRSNTSGTDFVRLNHLFLI
NSDSSYGSAQTRTMAIERRFKDKVVTTILVTPKGRVGPDTMSEQQFGGTR
SEPIPIPTGSVQSMSESQSLLLDALNNV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR032640AMPK1_CBM
IPR043554KINB
IPR037256ASC_dom_sf
IPR014756Ig_E-set