Ggra8886.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8886.t1
Unique NameGgra8886.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length414
Homology
BLAST of Ggra8886.t1 vs. uniprot
Match: A0A2V3J595 (DNA primase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J595_9FLOR)

HSP 1 Score: 564 bits (1454), Expect = 7.760e-199
Identity = 274/421 (65.08%), Postives = 328/421 (77.91%), Query Frame = 0
Query:    1 MPAPSAPPAT-------DLPAKLRWYYARLFPLHLFTRWLRFGSDQTLSHREISFTLAGDIYIRWKSFTDHHQLLQNLKTRAPVKIDIGAVYNQPPANKHALQVGLAPVQKELVFDIDITDYEDVINHAP-NMSATQVCDQNWQYMALAARVIDAALRQDFGFRNIMWVYSGRRGIHCWVADHRARFMTNEQRSAVADYLHLRFEGRDNRGRRQTQVTSPLHPSLKRAKRLCEPVFAEMLVKQRLLDDEQALCDMLQHIPNGAVRADLLARLRHMHGTPLQKWQRIEKELNKASRSDFSLRSTPDYIVFRYTYPRLDVNVSREMNHLLKAPFCVHPKTGRVCVPFRVENAEQFEPHAMAPQLDGLLAEIESGAG-PMSDRLNEAVAVFEQFVHGCEQELRDRHRRERLDQIDRQNVADVMK 412
            MPAP+A P +       DLPAKLRWYYARLFP+ L TRWLR+GSD TL+HREISFTLAGDIY+RWKSF D    L+ L  + PVKIDIGAVYN  P  KH++     P QKELVFDID+TDYEDV+  A  NMS T VCD NW+YMA A  VID ALR+DFGF+ IMWVYSGRRG+HCWVAD RARFM+NEQRSAVAD+LH+RFEGR+NRGRRQ +VT P+HPSL+RA+ +CEPVF +ML KQ LLD E+A+CDML+ I N  VRA++  ++  M G   + W+RIEKE+ KA+R++F +R+  DY+V RYTYPRLDVNVSREMNHLLKAPFCVHPKTGRVCVPFR   A +F P  MAP LDGLL EI+ G G  MS +L E V V E+FV GCE E+R++ R  +LDQ+DR+NV ++MK
Sbjct:    1 MPAPNAAPTSAAALQRADLPAKLRWYYARLFPIELITRWLRYGSDSTLAHREISFTLAGDIYLRWKSFGDKAAFLEELHAKRPVKIDIGAVYNNEPCKKHSIGAPFTPSQKELVFDIDMTDYEDVMAAATANMSPTDVCDNNWEYMAAAVEVIDTALREDFGFKIIMWVYSGRRGVHCWVADQRARFMSNEQRSAVADFLHVRFEGRENRGRRQMEVTHPMHPSLRRARTICEPVFRKMLRKQALLDGEKAICDMLELISNAVVRAEIREKVVRMRGDADEVWERIEKEVGKAARNEFGMRAMADYMVLRYTYPRLDVNVSREMNHLLKAPFCVHPKTGRVCVPFRAAEAARFRPGEMAPVLDGLLNEIDGGGGGEMSAKLEEGVRVLEEFVKGCEMEVREKARLNKLDQVDRRNVMELMK 421          
BLAST of Ggra8886.t1 vs. uniprot
Match: S0F318 (DNA primase n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F318_CHOCR)

HSP 1 Score: 493 bits (1268), Expect = 2.160e-170
Identity = 247/419 (58.95%), Postives = 313/419 (74.70%), Query Frame = 0
Query:    2 PAPSAPPATDLPAKLRWYYARLFPLHLFTRWLRFGSDQTLSHREISFTLAGDIYIRWKSFTDHHQLLQNLKTRAPVKIDIGAVYNQPPANKHALQVGLAPVQKELVFDIDITDYEDVINHAPNMSATQVCDQNWQYMALAARVIDAALRQDFGFRNIMWVYSGRRGIHCWVADHRARFMTNEQRSAVADYLHLRFEGRDNRGRRQTQVTSPLHPSLKRAKRL-CEPVFAEMLVK-QRLLDDEQALCDMLQHIPNGAVRADLLARLRHMHG-TPLQKWQRIEKELNKASRSDFSLRSTPDYIVFRYTYPRLDVNVSREMNHLLKAPFCVHPKTGRVCVPFRVENAEQFEPHAMAPQLDGLLAEIES------GAGPMSDRLNEAVAVFEQFVHGCEQELRDRHRRERLDQIDRQNVADVM 411
            PAP  P A DL  KL WYYAR+FP   FTRWLR+G+D TLS REISFTL GDIY+RWKSF    +LL +LK+  P+KIDIGA+YN PPA+K+++   L P++KELVFDID+TDYEDV+      SA +VCD+NW YMA A +VIDAALR+DFGFR+I+WVYSGRRGIHCWVAD RAR MTNEQRSAVAD+L+LRFEGR+N GRRQ +VT PLHPSL RAKR+ CE  F + ++  Q +LD ++ L  ML  +PN AV   +  RL    G +   KW RIEKEL +A +SD+ +R+T DYI+F++TYPRLDVNVS+E+NHLLKAPFCVHPKTGRVCVPFR    + F P  MAP++  LLAE++       G+GP SD + E V VFE+FV+  E E R   R+++L+ +D++  A+++
Sbjct:   15 PAP-VPIAGDLSGKLGWYYARIFPASQFTRWLRYGNDDTLSRREISFTLPGDIYLRWKSFPTPSKLLDSLKSLTPIKIDIGAIYNFPPADKNSVSAPLTPMEKELVFDIDMTDYEDVMGALAGGSAVEVCDRNWPYMATAVKVIDAALREDFGFRHILWVYSGRRGIHCWVADARARRMTNEQRSAVADFLYLRFEGRENAGRRQNEVTVPLHPSLARAKRVACEKTFRQFVLNDQGMLDGDERLRRMLAVVPNAAVADGIYQRLASSAGLSGPDKWDRIEKELLRAGKSDYGVRATVDYIMFKHTYPRLDVNVSKEINHLLKAPFCVHPKTGRVCVPFRATEVDGFLPGEMAPEVGSLLAEMKEVDGEVRGSGPASDLMLEGVKVFEEFVNAVEDEARSAQRKKKLEALDQRQAAELL 432          
BLAST of Ggra8886.t1 vs. uniprot
Match: A0A7S3ED41 (DNA primase n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ED41_9RHOD)

HSP 1 Score: 393 bits (1010), Expect = 1.700e-131
Identity = 197/417 (47.24%), Postives = 273/417 (65.47%), Query Frame = 0
Query:    8 PATDLPAKLRWYYARLFPLHLFTRWLRFGSDQTLSHREISFTLAGDIYIRWKSFTDHHQLLQNLKTRAPVKIDIGAVYNQPPANKHALQVGLAPVQKELVFDIDITDYEDVINHAPNMSATQVCDQNWQYMALAARVIDAALRQDFGFRNIMWVYSGRRGIHCWVADHRARFMTNEQRSAVADYLHLRFEGRDNRGRRQTQVTSPLHPSLKRAKR-LCEPVFAEMLVK-QRLLDDEQALCDMLQHIPNGAVRADLLARLRHMHG---TPLQKWQRIEKELNKASRSDFSLRSTPDYIVFRYTYPRLDVNVSREMNHLLKAPFCVHPKTGRVCVPFRVENAEQFEPHAMAPQLDGLLAEIESGAGPMSD-----RLNEAVAVFEQFVHGCEQE---LRDRHRRERLDQIDRQNVADVM 411
            PA +  ++LRWYY++ FP+ LF RWL +G +     REISFTL GDIY+R++SF +  +LL+ LK + P+KIDIGAVYN  P  +  +   L P++KELV DID+TDY DV+          VCD+NWQY+A A +++D ALR+DFGFR+++WVYSGRRG+HCWVAD  AR ++NE RSA+  YL ++    DN GRR   +T+PLHPSL RAKR +CEP+F E +++ Q ++   + +  ML  IPN A+R  LL RL        +   KW+R+  +L K + +      T DYI+F YTYPRLDVNVSR++ HLLK PFCVHP TGRVCVPFR E  EQF P   AP ++ L+ ++ + A  + +      LN+A+ VF++FV G E+E     ++    +L +IDR    D +
Sbjct:    7 PAGEFESQLRWYYSKHFPIALFHRWLSYGDESYFPRREISFTLPGDIYLRFRSFANADELLETLKKQTPIKIDIGAVYNISPKERANVGASLVPLEKELVIDIDMTDYYDVMGDLGEGDPVVVCDRNWQYIAGAVKIVDTALREDFGFRHLLWVYSGRRGVHCWVADQGARSLSNEARSAIISYLSVKMVSDDNAGRRIDDITNPLHPSLSRAKREVCEPLFNEFVLQDQGMMRTPRRIKQMLSFIPNQALREQLLDRLTSTSSKNWSETDKWERVRHDLIKHNET-----KTADYIIFHYTYPRLDVNVSRDLGHLLKGPFCVHPGTGRVCVPFRAEECEQFMPAKCAPHIESLIEDVNNVAKGLQEAQPSLHLNKAIKVFQEFVVGLEKEKALAEEKKLHAKLSEIDRNGARDFL 418          
BLAST of Ggra8886.t1 vs. uniprot
Match: A0A5J4Z912 (DNA primase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z912_PORPP)

HSP 1 Score: 351 bits (900), Expect = 1.530e-114
Identity = 180/355 (50.70%), Postives = 244/355 (68.73%), Query Frame = 0
Query:   16 LRWYYARLFPLHLFTRWLRFGSDQT--LSHREISFTLAGDIYIRWKSFTDHHQLLQNLKTRAPVKIDIGAVYNQPPANKHALQVGLAPVQKELVFDIDITDYEDVINHAPNMSATQVCDQNWQYMALAARVIDAALRQDFGFRNIMWVYSGRRGIHCWVADHRARFMTNEQRSAVADYLHLRFEGRDNRGRRQT---QVTSPLHPSLKRAK-RLCEPVFAEMLV-KQRLLDDEQALCDMLQHIPNGAVRADLLARLRHMHG---TPLQKWQRIEKELNKASRSDFSLRSTPDYIVFRYTYPRLDVNVSREMNHLLKAPFCVHPKTGRVCVPFRVENAEQFEPHAMAPQLDGLLAE 360
            L+WYYA+LFP+     WL +G       + RE+SFTL GDIY+R++SF    +L   LK R P+KID GAVYN PP ++    V L PV+KELVFDID+TDYEDV+      S     D+NW YMA+AA+ +D ALR+DFGF +I++VYSGRRG+HCWVAD RAR ++NE R+A+A+YL LRF+  +N GR++T     + PLHP L+RAK R+ E  F + ++ +QR+LD+ QAL ++L+ +P+ A  AD + R    +G   +P +KW  +EKEL  A         T +YI+FRYTYPRLD+NVS+E+NHLLK+PFC+HPKTGRVC PF   +A +F P   AP +D L+ E
Sbjct:   11 LKWYYAKLFPIKTMHAWLAYGRPDIDLFAKREVSFTLLGDIYLRFRSFASRDELHAALKERQPIKIDFGAVYNLPPRDRGLFSVPLVPVEKELVFDIDMTDYEDVMAALKGGSPVDETDRNWTYMAVAAQTLDMALREDFGFEHILFVYSGRRGMHCWVADERARALSNEARAAIAEYLALRFDSAEN-GRKETVPRAFSLPLHPMLQRAKTRILERTFLDFVLNEQRILDEPQALQNVLRLVPDAAT-ADKIQRYLEKNGGRLSPEEKWMYMEKELRTACPG------TAEYILFRYTYPRLDINVSKEINHLLKSPFCIHPKTGRVCAPFVARDAYEFAPANAAPTIDQLILE 357          
BLAST of Ggra8886.t1 vs. uniprot
Match: LOW QUALITY PROTEIN: DNA primase small subunit-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1D56 (LOW QUALITY PROTEIN: DNA primase small subunit-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1D56)

HSP 1 Score: 342 bits (876), Expect = 3.970e-111
Identity = 176/357 (49.30%), Postives = 220/357 (61.62%), Query Frame = 0
Query:   11 DLPAKLRWYYARLFPLHLFTRWLRFGSDQTLSHREISFTLAGDIYIRWKSFTDHHQLLQNLKTRAPVKIDIGAVYN-QPPANKHALQVGLAPVQKELVFDIDITDYEDVINHAPNMSATQVCDQNWQYMALAARVIDAALRQDFGFRNIMWVYSGRRGIHCWVADHRARFMTNEQRSAVADYLHLRFEGRDNRGRRQTQVTSPLHPSLKRAKRLCEPVFAEMLVKQRLLDDEQALCDMLQHIPNGAVRADLLARLRHMHGTPLQKWQRIEKELNKASRSDFSLRSTPDYIVFRYTYPRLDVNVSREMNHLLKAPFCVHPKTGRVCVPFRVENAEQFEPHAMAPQLDGLLAEIESGAG 366
            D  A+L+WYYARLFP  LF RWL +G +  L+ RE+S TL GDIY+RWKSF     LL  LK + P+K+DIGAVYN  PP +K A+   L P++KELVFD+D+TDY+DV  +    S  + CD+NW+YMA A  V+DAALRQDFGF+ I+WVYSGRRGIHCWV DHRAR + NEQR A+A+YLH+RFE R+N G      T   H       R   PV              QA C + +H+P                                AS  D++LR   DYI+ ++ YPRLD+NVS+E+NHLLKAPFCVHPKTGRVCVPF  + A+ F P   AP L  LLA++E   G
Sbjct:   82 DFAAQLKWYYARLFPSELFGRWLSYGDNAYLARREVSLTLPGDIYLRWKSFASAEDLLATLKAQTPIKLDIGAVYNFXPPRDKGAVPTPLVPLEKELVFDVDMTDYDDVFGNLAGGSEVEKCDRNWRYMATAVHVLDAALRQDFGFKLILWVYSGRRGIHCWVCDHRARRLNNEQRVAIAEYLHVRFETRENAG----SATDGSH-------RAAAPVPGA----------RQARC-VRRHVPG-------------------------------ASAKDYALRGIADYILLKHCYPRLDINVSKEINHLLKAPFCVHPKTGRVCVPFAAQAADDFSPGQDAPTLTALLADMEERRG 385          
BLAST of Ggra8886.t1 vs. uniprot
Match: A0A7S0ZEK8 (DNA primase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEK8_9RHOD)

HSP 1 Score: 340 bits (872), Expect = 3.820e-110
Identity = 177/366 (48.36%), Postives = 239/366 (65.30%), Query Frame = 0
Query:   10 TDLPAKLRWYYARLFPLHLFTRWLRFGS-DQTL-SHREISFTLAGDIYIRWKSFTDHHQLLQNLKTRAPVKIDIGAVYNQPPANKHALQVGLAPVQKELVFDIDITDYEDVINHAPNMSATQVCDQNWQYMALAARVIDAALRQDFGFRNIMWVYSGRRGIHCWVADHRARFMTNEQRSAVADYLHLRFEGRDNRGRRQT-QVTSPLHPSLKRAK-RLCEPVFAE-MLVKQRLLDDEQALCDMLQHIPNGAVRADLLARLRHMHGTPL-------QKWQRIEKELNKASRSDFSLRSTPDYIVFRYTYPRLDVNVSREMNHLLKAPFCVHPKTGRVCVPFRVENAEQFEPHAMAPQLDGLLAEIES 363
            T   ++L+WYYARLFPL     WL +   D TL SHRE+SFTL+GDIY+R++SF +  +L   LK RAP+KID GA+YN PP ++      L  ++KELVFDID+TDY DV+      +  +  D+NW+YMA A  ++D ALR DFGF +I+WVYSGRRGIHCWVAD+RAR ++NE RSA+A++L ++FE      +R T  VT PLHPSL RAK ++CE VF E +L+KQ +L  E+     LQ I +  +R  + + L               +KW  I KEL    +      +  DY++ +YTYPRLD+ VS+++ HLLK+PFCVHPKTGRVCVPFR  +A +F P   AP+L  L+ E+ S
Sbjct:   19 THFVSQLQWYYARLFPLQSIHNWLSYSQPDSTLFSHREVSFTLSGDIYLRFRSFRNASELHTALKDRAPIKIDFGAIYNIPPVSRSTSHSPLVALEKELVFDIDMTDYIDVMGDLNEGNEMERTDKNWEYMAAAVTILDEALRGDFGFESILWVYSGRRGIHCWVADYRARVLSNESRSAIAEFLAIKFEADSASSKRNTFTVTHPLHPSLSRAKSQVCEQVFNEFVLLKQNILQGEERERKFLQWIQDPVLREKIESALLRSQSKSASVELRSDEKWHVIVKELKANGQL-----ALIDYLILKYTYPRLDIAVSKDIGHLLKSPFCVHPKTGRVCVPFRARDAYEFRPKLNAPELSALIDELNS 379          
BLAST of Ggra8886.t1 vs. uniprot
Match: A0A7S3CFA3 (DNA primase n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CFA3_9CHLO)

HSP 1 Score: 301 bits (772), Expect = 6.010e-95
Identity = 175/413 (42.37%), Postives = 238/413 (57.63%), Query Frame = 0
Query:   13 PAKLRWYYARLFPLHLFTRWLRFGSDQT-----------LSHREISFTLAGDIYIRWKSFTDHHQLLQNLKTRAPVKIDIGAVYNQPPANKHALQVG-------------LAPVQKELVFDIDITDYEDVINHAPNMSATQVCDQNWQYMALAARVIDAALRQDFGFRNIMWVYSGRRGIHCWVADHRARFMTNEQRSAVADYLHLRFEGRDNRGRRQTQVTSPLHPSLKRAKRLCEPVFA-EMLVKQRLLDDEQALCDMLQHIPNGAVRADLLARLRH--------MHGTPLQKWQRIEKELN------KASRSDFSLRSTPDYIVFRYTYPRLDVNVSREMNHLLKAPFCVHPKTGRVCVPFRVENAEQFEPHAMAPQLDGLLAEIESGAGPMSDRLNEAVAVFEQ-FVHG 385
            P  ++ YY RLFP     +WL +G+D              S RE  FTL GDI++R++SF D  ++   +K + P KIDIG VYN  P  + A   G               PV++ELVFDID+ DY+D +N+       + C   W  MA+A RV+D  LR+DFGF +I +V+SGRRGIHCWV D RAR MT+EQR+AVA+Y  L   GR+  G+ +  +TSP HPS++RA  + EP+F  EML  Q LLD  ++   +L++IP+G V   L  R ++        +      +W  + KE++      K       L    D IVF YTYP+LD+ VS++ NHLLKAPFCVHPKTGRVCVP   E AE F+P   AP +  LL E++SGA   S  ++E V +FE  F+ G
Sbjct:   42 PEHMKLYYGRLFPHQTMYKWLAYGNDYARSKHPKADRSFFSRREFCFTLDGDIFVRYQSFKDAEEMEAAIKQKCPAKIDIGPVYNVDPRKRAAYSGGSGGDLSGAGGLRAFQPVERELVFDIDMDDYDDFLNYTHKDHGWEKC---WALMAVAIRVLDRGLREDFGFEHIFFVFSGRRGIHCWVCDKRARMMTDEQRAAVANYFSL-CRGREG-GKAKVMLTSPRHPSVQRAAEILEPIFVDEMLPAQGLLDTSESWEKILEYIPDGDVCDKLRERWQNGRRSSTSAVEDVNKSRWLELCKEVDRCVGRTKDPMKRRQLAKCKDEIVFAYTYPKLDIEVSKKRNHLLKAPFCVHPKTGRVCVPIDPERAEDFDPDRDAPTIFQLLEELDSGAERTS--MSENVELFEDLFLKG 447          
BLAST of Ggra8886.t1 vs. uniprot
Match: A0A6P8YWW7 (DNA primase n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8YWW7_THRPL)

HSP 1 Score: 300 bits (767), Expect = 8.100e-95
Identity = 169/409 (41.32%), Postives = 244/409 (59.66%), Query Frame = 0
Query:   11 DLPAKLRWYYARLFPLHLFTRWLRFGSDQT--LSHREISFTLAGDIYIRWKSFTDHHQLLQNLKTRAPVKIDIGAVYNQPPANKHALQVGLAPVQKELVFDIDITDYEDVINHAPNMSATQVCDQNWQYMALAARVIDAALRQDFGFRNIMWVYSGRRGIHCWVADHRARFMTNEQRSAVADYLHLRFEGRDNRGRRQTQVTSPLHPSLKRAKRLCEPVFAEMLVK-QRLLDDEQALCDMLQHIPNGAVRADLLARLRHMHGTPLQKWQRIE----KELNKASRSDFSLRSTPDYIVFRYTYPRLDVNVSREMNHLLKAPFCVHPKTGRVCVPFRVENAEQFEPHAMAPQLDGLLAEI---------ESGAGPMSDR---------LNEAVAVFEQFVHGCEQELRDRH 394
             LP  L  YY RLFP   F RW+ +G+ +     +RE SFTLA DIYIR+KSF++   + ++++ R P KIDIGAVY   P  +H   V   P ++ELVFDID+TDY+DV       +   +CD+ W++M +A RV+DAALR+DFG+ +++WV+SGRRG+HCWV D  AR +    RSAVA+YL L   G +NR ++    +  LH S+KRAK   E  F  M V+ Q +L   + +  +L  +P+  +R D+  R  + H T L +WQ ++      + K     + L    + I+F+YTYPRLD+NVS+ MNHLLKAPFC+HPKTG+VC+PF  + AE+F P  + P ++ L+ EI         +S  G  S R         + + V +FE+FV   E   + +H
Sbjct:   10 SLPDLLPLYYKRLFPYGPFYRWISYGNVENNYFQNREFSFTLAEDIYIRFKSFSNREDMEKDIQKRCPYKIDIGAVYASRPEERHTTAV-FQPQERELVFDIDMTDYDDVRTCC---TGADICDKCWKFMVVACRVLDAALREDFGWEHLLWVFSGRRGVHCWVCDESARKLDVSARSAVAEYLQL-VTGGENRAKKVILNSDKLHHSIKRAKNFIEKKFESMCVEGQDILGTPERIAKVLALVPDEQLRQDM-EREMNKHNTSLPRWQALQAVFQNAVKKGQVKKWRLHLIEE-IMFQYTYPRLDINVSKGMNHLLKAPFCIHPKTGKVCIPFNPKAAEKFNPMNV-PTINQLIHEIGKFDEEQMQDSNEGQGSLRRVKDYKKTSMAKGVVIFEEFVRKLEDTWKGKH 410          
BLAST of Ggra8886.t1 vs. uniprot
Match: U4UA18 (DNA primase (Fragment) n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=U4UA18_DENPD)

HSP 1 Score: 295 bits (754), Expect = 2.820e-93
Identity = 159/348 (45.69%), Postives = 227/348 (65.23%), Query Frame = 0
Query:   19 YYARLFPLHLFTRWLRFGSDQTLSHREISFTLAGDIYIRWKSFTDHHQLLQNLKTRAPVKIDIGAVYNQPPANKHALQVGLAPVQKELVFDIDITDYEDVINHAPNMSATQVCDQNWQYMALAARVIDAALRQDFGFRNIMWVYSGRRGIHCWVADHRARFMTNEQRSAVADYLHLRFEGRDNRGRRQTQVTSPLHPSLKRAKRLCEPVFAEMLVKQRLLDDEQALCDMLQHIPNGAVRADLLARLRHMHGTPLQKWQRIEK---ELNKASRSDFSLRSTPDYIVFRYTYPRLDVNVSREMNHLLKAPFCVHPKTGRVCVPFRVENAEQFEPHAMAPQLDGLLAEIES 363
            YY RLFP  LF RWL +GS    + REISFTL GD+YIR++SF    + +Q L  + P+KIDIGAVY   P ++  L V + PV KE+VFDID+TDY+DV +         VC + W+ MA+AARV+DAALR+DFGFR+I+WV+SGRRGIH WV+D +AR + +  RSAVA+YL +  +G   +G++   + S +H S++RA  + E  F +++ +Q LL DEQ L   L  I +  +R      L     T L++WQ  E+   +L +  +     R+  + I  +  YPRLD+NV++ + HLLKAPFCVHPKTG+VCVPF V++AE F+PH + P L  ++ E+++
Sbjct:   17 YYKRLFPAALFHRWLSYGSSFAFATREISFTLLGDVYIRYQSFDTADEFVQELCRKMPIKIDIGAVYLTKPRSRKVLSV-MTPVAKEMVFDIDMTDYDDVRSCC---QGADVCPKCWRLMAIAARVLDAALREDFGFRHILWVFSGRRGIHAWVSDEQARGLDDAARSAVAEYLQV-VKGGTAKGKK-VHLPSNIHSSIRRALAIIEKHFQDIVQEQDLLGDEQRLGAFLALI-DKELRPQFKEALAGA-ATSLERWQAFERTFVQLLQKGQVPRGQRNLREEIKLQIAYPRLDINVTKSLGHLLKAPFCVHPKTGKVCVPFSVKHAESFDPHGV-PTLRAIMDEVDA 355          
BLAST of Ggra8886.t1 vs. uniprot
Match: DNA primase small subunit n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C7474 (DNA primase small subunit n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C7474)

HSP 1 Score: 295 bits (754), Expect = 4.740e-93
Identity = 160/399 (40.10%), Postives = 240/399 (60.15%), Query Frame = 0
Query:   19 YYARLFPLHLFTRWLRFGSDQTLSHREISFTLAGDIYIRWKSFTDHHQLLQNLKTRAPVKIDIGAVYNQPPANKHALQVGLAPVQKELVFDIDITDYEDVINHAPNMSATQVCDQNWQYMALAARVIDAALRQDFGFRNIMWVYSGRRGIHCWVADHRARFMTNEQRSAVADYLHLRFEGRDNRGRRQTQVTSPLHPSLKRAKRLCEPVFAEML-VKQRLLDDEQALCDMLQHIPNGAVRADLLARLRHMHGTPLQKWQRI---EKELNKASRSDFSLRSTPDYIVFRYTYPRLDVNVSREMNHLLKAPFCVHPKTGRVCVPFRVENAEQFEPHAMAPQLDGLLAEI----------ESGAGPMSDRLNE--------AVAVFEQFVHGCEQELRDRHR 395
            +Y+RLFP + F RWL +GS  T   RE+SFTL GDIYIR++SF         L    P+KIDIGA+YN PP  K  +Q    PV+KELVFDID+TDY+DV       S T +C + W++M LA +V+DAALR+DFGF++++WV+SGRRG+HCWV D   +  T+E+R AVA+YL ++ +G  N           +H SL+RA  + +P F +M+ V+Q +L  ++ +   L++I +  +R      LR + G+   +W+      + L++        ++T + ++  Y YPRLD+NVS+ +NHLLKAPFCVHPKTG+VC+PF  +  ++F+P A  P L  L+ EI          E   G  S ++ +        ++ VFE F+   E+EL+ + +
Sbjct:   16 FYSRLFPCNSFYRWLSYGSSATFKLRELSFTLLGDIYIRYQSFESMENFSNELNKHKPIKIDIGAIYNHPPKYKTQIQK-FGPVEKELVFDIDMTDYDDVRTCC---SGTDICSKCWKFMVLACKVLDAALREDFGFKHMLWVFSGRRGVHCWVCDENVKKFTDEERKAVAEYLFVKKDGHKN-----ILFGDKIHTSLRRALTIIKPYFNQMMFVEQNILGTDEGIKKFLKNI-HEEIRIQSEEVLRSVEGSEA-RWKVFCDYFRTLSQKQSIPKIYKNTIEELMLLYCYPRLDINVSKGINHLLKAPFCVHPKTGKVCIPFNPKTVDKFDP-ATVPTLTLLVDEINKYDQITKEEEMADGVNSSKIKDYKKTSLLKSITVFEDFLRNIERELKQKRK 402          
The following BLAST results are available for this feature:
BLAST of Ggra8886.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5957.760e-19965.08DNA primase n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
S0F3182.160e-17058.95DNA primase n=1 Tax=Chondrus crispus TaxID=2769 Re... [more]
A0A7S3ED411.700e-13147.24DNA primase n=3 Tax=Rhodosorus marinus TaxID=10192... [more]
A0A5J4Z9121.530e-11450.70DNA primase n=1 Tax=Porphyridium purpureum TaxID=3... [more]
LOW QUALITY PROTEIN: DNA primase small subunit-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1D563.970e-11149.30LOW QUALITY PROTEIN: DNA primase small subunit-lik... [more]
A0A7S0ZEK83.820e-11048.36DNA primase n=1 Tax=Timspurckia oligopyrenoides Ta... [more]
A0A7S3CFA36.010e-9542.37DNA primase n=1 Tax=Chloropicon roscoffensis TaxID... [more]
A0A6P8YWW78.100e-9541.32DNA primase n=1 Tax=Thrips palmi TaxID=161013 RepI... [more]
U4UA182.820e-9345.69DNA primase (Fragment) n=2 Tax=Dendroctonus ponder... [more]
DNA primase small subunit n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C74744.740e-9340.10DNA primase small subunit n=1 Tax=Nicrophorus vesp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014052DNA primase, small subunit, eukaryotic/archaealTIGRFAMTIGR00335TIGR00335coord: 17..351
e-value: 3.7E-53
score: 179.0
IPR014052DNA primase, small subunit, eukaryotic/archaealPANTHERPTHR10536DNA PRIMASE SMALL SUBUNITcoord: 10..392
IPR014052DNA primase, small subunit, eukaryotic/archaealCDDcd04860AE_Prim_Scoord: 25..347
e-value: 2.24427E-70
score: 219.793
IPR002755DNA primase, small subunitPFAMPF01896DNA_primase_Scoord: 108..339
e-value: 1.7E-49
score: 168.3
NoneNo IPR availableGENE3D3.90.920.10DNA primase, PRIM domaincoord: 6..392
e-value: 4.7E-119
score: 399.9
NoneNo IPR availablePANTHERPTHR10536:SF0DNA PRIMASE SMALL SUBUNITcoord: 10..392
NoneNo IPR availableCDDcd00525AE_Prim_S_likecoord: 268..337
e-value: 3.85161E-4
score: 38.5006
NoneNo IPR availableSUPERFAMILY56747Prim-pol domaincoord: 13..351

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:649395..650636 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8886.t1Ggra8886.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 649395..650636 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8886.t1 ID=Ggra8886.t1|Name=Ggra8886.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=414bp
MPAPSAPPATDLPAKLRWYYARLFPLHLFTRWLRFGSDQTLSHREISFTL
AGDIYIRWKSFTDHHQLLQNLKTRAPVKIDIGAVYNQPPANKHALQVGLA
PVQKELVFDIDITDYEDVINHAPNMSATQVCDQNWQYMALAARVIDAALR
QDFGFRNIMWVYSGRRGIHCWVADHRARFMTNEQRSAVADYLHLRFEGRD
NRGRRQTQVTSPLHPSLKRAKRLCEPVFAEMLVKQRLLDDEQALCDMLQH
IPNGAVRADLLARLRHMHGTPLQKWQRIEKELNKASRSDFSLRSTPDYIV
FRYTYPRLDVNVSREMNHLLKAPFCVHPKTGRVCVPFRVENAEQFEPHAM
APQLDGLLAEIESGAGPMSDRLNEAVAVFEQFVHGCEQELRDRHRRERLD
QIDRQNVADVMKN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014052DNA_primase_ssu_euk/arc
IPR002755DNA_primase_S