Ggra8910.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8910.t1
Unique NameGgra8910.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length296
Homology
BLAST of Ggra8910.t1 vs. uniprot
Match: A0A2V3J7Z8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7Z8_9FLOR)

HSP 1 Score: 396 bits (1017), Expect = 3.020e-136
Identity = 200/298 (67.11%), Postives = 236/298 (79.19%), Query Frame = 0
Query:    1 MAFITALPVGVKSTSSTLRSSFVCNQVVSGNA-STSNTLRMGYGDYSYSTDKTKGHVNQYYVDKFRIVTDFAKGIPASLADAKLGRDQKGRVVVPTGGIPQPVDPALPPRDETATPDPRIAEAEGVLYPWDPNYVDPKFAPETFADCEDDAIADDAFQKFRSSVFEQRNSVLTEMDFGAVAHKQRIRAGFDEKYLLCLEGALDAAYARLQDITDPMMFTPYGEPQTEIPGQPFTKSVGAMDFQITPGEKINFWSSETPKSAP---YKKPSGAQTPELPYNVSPTVEEMKEAQKARGLL 294
            MAF+ AL VG    +    SSFVCN++VS +  + S+T RMGYGDYSY TDKTKGHVNQYYVDKFRI +DF+KG+PASL+DAKLGRDQKGRV+VP  GIPQ  D  +P RD TA PDPRIAEAEG ++ WDP YVDPKF+P T+ +CED A+A+DAFQKFR+SV EQR +VLT MDFGAV  K+RIRAG DEKYLLCL+G+LD  YA LQDI DP  FTP GEPQTEIPGQP+T SVGAMDF +TPGE+I FW     K      +KKPSG+ TPELPYNVS TV+++K+AQKAR ++
Sbjct:    1 MAFVNALSVGTHVPAKNRSSSFVCNKLVSRDVRAKSSTPRMGYGDYSYLTDKTKGHVNQYYVDKFRIASDFSKGVPASLSDAKLGRDQKGRVIVPEKGIPQAFDSPIPERDATAPPDPRIAEAEGAVFAWDPAYVDPKFSPGTYENCEDPAVAEDAFQKFRASVNEQRGAVLTRMDFGAVERKKRIRAGLDEKYLLCLDGSLDVRYAVLQDIADPPTFTPTGEPQTEIPGQPYTGSVGAMDFMLTPGEEIAFWKQLQAKGVDEPVFKKPSGSDTPELPYNVSATVDQLKDAQKARDII 298          
BLAST of Ggra8910.t1 vs. uniprot
Match: R7Q7D7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7D7_CHOCR)

HSP 1 Score: 315 bits (806), Expect = 3.160e-104
Identity = 167/296 (56.42%), Postives = 199/296 (67.23%), Query Frame = 0
Query:    1 MAFITALPVGVKSTSSTLRSSFVCNQVVSGNASTSNT-LRMGYGDYSYSTDKTKGHVNQYYVDKFRIVTDFAKGIPASLADAKLGRDQKGRVVVPTGGIPQPVDPALPPRDETATPDPRIAEAEGVLYPWDPNYVDPKFAPETFADCEDDAIADDAFQKFRSSVFEQRNSVLTEMDFGAVAHKQRIRAGFDEKYLLCLEGALDAAYARLQDITDPMMFTPYGEPQTEIPGQPFTKSVGAMDFQITPGEKINFWSSETPKSAPYKKPSGAQTPELPYNVSPTVEEMKEAQKARGLLP 295
            MAF+ ALP+    T+     S +    V+  AS S   + MGYGDYSYSTDKT+GH  QYY+DKFRIV+DF +G+P   +   LGR   G V VP  GI Q  DPALP  DE   PDPR+ EA G LYPWD +YVDP++  +TFA+  DD IAD +FQ+FR+SV E R   LT MDFGA A  +RI  G DEK LL L+GALD  YARLQ I++P    P G PQTEIPG P+  SVGAMDF   PGEK+ FW ++ P   PYK+PSGA TPELPYN SP V E++E Q ARGLLP
Sbjct:    1 MAFVPALPLTASRTTPVGSRSSLSGTTVTNPASRSMAAITMGYGDYSYSTDKTRGHAMQYYIDKFRIVSDFGRGVPLYASTPMLGRGIMGGVEVPKEGIKQVFDPALPTSDEPTAPDPRLVEASG-LYPWDSDYVDPEWRADTFANMSDDEIADQSFQEFRASVSESRGMALTAMDFGATARVERIIGGIDEKELLTLDGALDVNYARLQKISNPATLNPTGSPQTEIPGIPYLTSVGAMDFIEKPGEKVAFWKTDKPADLPYKRPSGADTPELPYNASPDVAEIQEGQAARGLLP 295          
BLAST of Ggra8910.t1 vs. uniprot
Match: A0A291FEB5 (LRC5 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEB5_GRIPA)

HSP 1 Score: 300 bits (768), Expect = 2.460e-98
Identity = 164/303 (54.13%), Postives = 197/303 (65.02%), Query Frame = 0
Query:    1 MAFITALPV----------GVKSTSSTLRSSFVCNQVVSGNASTSNTLRMGYGDYSYSTDKTKGHVNQYYVDKFRIVTDFAKGIPASLADAKLGRDQKGRVVVPTGGIPQPVDPALPPRDETATPDPRIAEAEGVLYPWDPNYVDPKFAPETFADCEDDAIADDAFQKFRSSVFEQRNSVLTEMDFGAVAHKQRIRAGFDEKYLLCLEGALDAAYARLQDITDPMMFTPYGEPQTEIPGQPFTKSVGAMDFQITPGEKINFWSSETPKSAP--YKKPSGAQTPELPYNVSPTVEEMKEAQKAR 291
            MAF++A PV          G +  +S LR           +AS S+T RMGYG YSY TDKTKGHVNQYYVDKFRI +D+ KG P + ADA LGR  KG V+VPT GIPQ  DPA+ PRD T  PDPRIAE+EG +YPWD NY DP+F P  ++D  D    D +F  FRSS++E R   LT  DFGAVA  QRI+ G DEKYL+ L+G LDA YAR Q I +P + +P G P TEIPG P+  SVGAMDF     E + FW S  P + P  YK+PSGAQTP LPYN +  V  + EAQ+A+
Sbjct:    1 MAFVSATPVSQAVRPAPALGAQLAASPLRPEIA-------HASNSSTPRMGYGAYSYITDKTKGHVNQYYVDKFRIASDWTKGTPKTQADAVLGRTFKGAVLVPTEGIPQEFDPAIAPRDNTVDPDPRIAESEGEVYPWDINYFDPQFLPSAYSDVNDPETVDSSFADFRSSMWESRRESLTAQDFGAVARVQRIKNGLDEKYLMTLDGMLDARYARFQKIAEPAVLSPTGTPMTEIPGTPYLGSVGAMDFIAQEEESVAFWKSG-PSTTPVNYKRPSGAQTPNLPYNTAAPVAAINEAQEAQ 295          
BLAST of Ggra8910.t1 vs. uniprot
Match: A0A1X6NU69 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NU69_PORUM)

HSP 1 Score: 224 bits (572), Expect = 1.110e-68
Identity = 126/271 (46.49%), Postives = 154/271 (56.83%), Query Frame = 0
Query:   37 TLRMGYGDYSYSTDKTKGHVNQYYVDKFRIVTDFAKGIPASLADAKLGRDQKGRVVVPTGGIPQPVDPALPPRDETATPDPRIAEAEGVLYPWDPNYVDPKFAPETFADCEDDAIADDAFQKFRSSVFEQRNSVLTEMDFGAVAHKQRIRAGFDEKYLLCLEGALDAAYARLQDITDPMMFTPYGEPQTEIPGQPFTKSVGAMDFQITPGEKIN-------------FWSSETPKSAPYKKPSGAQTPELPYNVSPTVEEMKEAQKARGLL 294
            T RMGYGDYSY TD TKGHV QYYVDKFR  +DF++G+PAS AD  LGR  KG V VP  GIPQ  +  L P  + A  DPR+AEAEG ++ WD  YVDP  +     D  D+A+AD AF  FR S+   R + L        A   R+     EK LL L+G LDA Y+RLQ I +    TPYG PQTEIPG+P+  SVGA+DF   PG +               FW         YK+P GA TPE  YN SP V  +    ++ G++
Sbjct:   40 TPRMGYGDYSYLTDATKGHVGQYYVDKFRRASDFSRGVPASAADGLLGRTAKGAVAVPAEGIPQLTEGPLAPSPDAAA-DPRVAEAEGTVWSWDAGYVDPSLS--AVEDTNDEAVADRAFAAFRGSMESTRGAALARSSKALEATVTRLSGTIGEKALLTLDGQLDAEYSRLQKIKNHPRLTPYGRPQTEIPGRPYVGSVGALDFAKGPGGEPATTAVVAAGNGVGAFWKEPEQPQPTYKRPLGAATPERIYNASPDVARLTSTAESAGIV 307          
BLAST of Ggra8910.t1 vs. uniprot
Match: A0A5J4Z2M2 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2M2_PORPP)

HSP 1 Score: 199 bits (507), Expect = 3.400e-59
Identity = 119/254 (46.85%), Postives = 152/254 (59.84%), Query Frame = 0
Query:   38 LRM-GYGDYSYSTDKTKGHVNQYYVDKFRIVTDFAKG--IPASLADAKLGRDQKGRVVVPTGGIPQPVDPALPPRDETATPDPRIAEAEGVLYPWDPNYVDPKFAPETFADCEDDAIADDAFQKFRSSVFEQRNSVLTEMDFGAVAHKQRIRAGF--DEKYLLCLEGALDAAYARLQDITDPMMFTPYGEPQTEIPGQPFTKSVGAMDFQ--ITPGEKIN-----FWSSETPKSAPYKKPSGAQTPELPYNVSP 279
            LRM GYGDYSYSTD+TKGHVNQYYVDK R  +D+     +PAS  DA LGR  KG V VP  GIPQ  DP L    ++   DPRIAEA+G ++ WD  +VD      + AD  D+A+AD+AF KFR SV  +R +++T+ +    +    +R G    E  LL   G   A  A  + I     +T  G+PQTEIPG+PF KS+GAMD+   +  G+ +      FW  + PK  PYK+P GA TPELPYN  P
Sbjct:   24 LRMSGYGDYSYSTDRTKGHVNQYYVDKARSRSDWGNRNVLPASEGDAVLGRTAKGAVAVPEFGIPQLDDPVLGFGPDSMV-DPRIAEADGAVWRWDAGFVDESMTLASCADISDEAVADEAFAKFRGSVLAERGAMITKAESATASVITSLRDGLYSGEAQLLTASGQRLANVAGQEKIATISGYTWDGQPQTEIPGKPFVKSIGAMDYMDGVEGGDVVAAKVGAFWKPKAPKEVPYKRPMGANTPELPYNTVP 276          
The following BLAST results are available for this feature:
BLAST of Ggra8910.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J7Z83.020e-13667.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7D73.160e-10456.42Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A291FEB52.460e-9854.13LRC5 n=1 Tax=Griffithsia pacifica TaxID=35689 RepI... [more]
A0A1X6NU691.110e-6846.49Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z2M23.400e-5946.85Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:784780..785667 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8910.t1Ggra8910.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 784780..785667 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8910.t1 ID=Ggra8910.t1|Name=Ggra8910.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=296bp
MAFITALPVGVKSTSSTLRSSFVCNQVVSGNASTSNTLRMGYGDYSYSTD
KTKGHVNQYYVDKFRIVTDFAKGIPASLADAKLGRDQKGRVVVPTGGIPQ
PVDPALPPRDETATPDPRIAEAEGVLYPWDPNYVDPKFAPETFADCEDDA
IADDAFQKFRSSVFEQRNSVLTEMDFGAVAHKQRIRAGFDEKYLLCLEGA
LDAAYARLQDITDPMMFTPYGEPQTEIPGQPFTKSVGAMDFQITPGEKIN
FWSSETPKSAPYKKPSGAQTPELPYNVSPTVEEMKEAQKARGLLP*
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