Ggra8891.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8891.t1
Unique NameGgra8891.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length350
Homology
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BLAST of Ggra8891.t1 vs. uniprot
Match: A0A2V3J4F3 (NEP1-interacting protein-like 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4F3_9FLOR)

HSP 1 Score: 211 bits (537), Expect = 9.550e-62
Identity = 141/271 (52.03%), Postives = 163/271 (60.15%), Query Frame = 0 
Query:   56 VALRRWEIDHAAPEVLVYRVAAQPAQHKLTLQSDPEQYADAIISLRSAGHLPPEQTPPSLSVQPSV-TEP---------PSTLNGTVTSDTQLPQVLVAIPPAESNCVICLESIIVGQR-------------------RSNNQSSLAVI--------------------SDRPVTLEPTYPPRPNDRGESTTLQNTLSRDKSSFLSRQSDDMSLDRFNSDTTSQLDDQNTAELLSQVRSALRGQSSMLSIGTTCSAAPSDILPVPQLPSNP 277
            VALRRWEID+AAPE LV+RV + P Q+ LTL+S+P+ Y  A+ +LR+AGHLPP+   P  + + +V TE          P  ++ T  S  QLP+VLVAIPP E+NCVICLE IIVGQR                   R  N                           SDR  TL    P R +DRGE   L  TLSR+KSSFLSRQSDD+SLDRFNSDTTSQLD+Q   ELLSQVR ALRGQSSMLSIGTTCSA PSD  P  QL S P
Sbjct:   56 VALRRWEIDNAAPEALVHRVVSNPNQYTLTLKSNPDLYIKAVTALRTAGHLPPDLVQPPETTESTVPTEXXXXXXXXXEPXPISDTAPSSGQLPRVLVAIPPTETNCVICLEPIIVGQRVRSLPCHHIYHSQCIRIWLRRKNACPCXXXXXXXXXXXXXXXXXXXXXQTSDRQPTLVQPIP-RFDDRGERNALHATLSRNKSSFLSRQSDDISLDRFNSDTTSQLDEQTAEELLSQVRRALRGQSSMLSIGTTCSATPSDTAPSHQLVSAP 325
The following BLAST results are available for this feature:
BLAST of Ggra8891.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4F39.550e-6252.03NEP1-interacting protein-like 1 n=1 Tax=Gracilario... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 335..349
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..349
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..349
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:665716..666879 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8891.t1Ggra8891.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 665716..666879 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8891.t1 ID=Ggra8891.t1|Name=Ggra8891.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=350bp
MSLDAIIYVVVALAIALAALVLLTFLYFQRRRQRTMLLLALAQEEAERRR
RKKKKVALRRWEIDHAAPEVLVYRVAAQPAQHKLTLQSDPEQYADAIISL
RSAGHLPPEQTPPSLSVQPSVTEPPSTLNGTVTSDTQLPQVLVAIPPAES
NCVICLESIIVGQRRSNNQSSLAVISDRPVTLEPTYPPRPNDRGESTTLQ
NTLSRDKSSFLSRQSDDMSLDRFNSDTTSQLDDQNTAELLSQVRSALRGQ
SSMLSIGTTCSAAPSDILPVPQLPSNPLPDSNDVLRPEDEQLRHSSMPVE
QSISSSAQPAPDLPETEANERQAAADIEAITPSPHANLRSISTSGIGNN*
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