Ggra8898.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8898.t1
Unique NameGgra8898.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length408
Homology
BLAST of Ggra8898.t1 vs. uniprot
Match: A0A2V3J5P5 (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5P5_9FLOR)

HSP 1 Score: 511 bits (1315), Expect = 4.050e-178
Identity = 263/339 (77.58%), Postives = 288/339 (84.96%), Query Frame = 0
Query:   69 DSFAEPSNSASRTPSSDSDDGDTIVDEPPTKQPVSPVSTASGQSPTPPLDIIHSVAXXXXXXXXXPVGDTPSPTPRTGVFSIFSPRNGKSTSPLRRLFSPRWFSAPPVERDTESTITN-NPPRRMNVVCSCFARPQTVDESLPDYDYVEHIKSLEPTYEPEPPLLPTPSPHAEDRICLVLDLDETLVHSSFTPLPNADFEVPLDMQGEIHTVYVKKRPGVDNFLKKASEWFEIVIFTASLALYANPVVDLLDPHNLVELRLYREHCVLIGGCYVKDIAKLGRDLKRTVIIDNSPLSYVLQPENAIPISAFFTDDNDRELDKTLALLEQARNLEDVRKAL 406
            +S A+ SNS SRT S+DSDD  T+ DE P K  VSPVS+  GQ+ T PLDIIHSVA         P+ D  + TPR+  F+IFSPRNGKS SP RRLFSPR FS+  ++RD+ESTITN N  RR+  VCSCFA  Q+ DESL + DY EHIK+LEPTYEPEPPLLP+P+PHAEDRICLVLDLDETLVHSSFTPLPNADFEVPLDMQGEIHTVYVKKRPGVD+FL K SEW+EIVIFTASLALYANPVVDLLDP NLV+LRLYREHCVLIGGCYVKDIAKLGRDLKRTVIIDNSPLSYVLQPENAIPISAFFTDDNDREL++TL LLE ARNLEDVRKAL
Sbjct:   64 ESLADRSNSTSRTASTDSDDXXTVADEAPAKHDVSPVSS-DGQTNTAPLDIIHSVANRPTVPPLSPISDATASTPRSSRFAIFSPRNGKSLSPFRRLFSPRRFSSTSLDRDSESTITNGNFQRRLKFVCSCFASKQSTDESLQELDYAEHIKTLEPTYEPEPPLLPSPTPHAEDRICLVLDLDETLVHSSFTPLPNADFEVPLDMQGEIHTVYVKKRPGVDHFLSKVSEWYEIVIFTASLALYANPVVDLLDPQNLVQLRLYREHCVLIGGCYVKDIAKLGRDLKRTVIIDNSPLSYVLQPENAIPISAFFTDDNDRELERTLELLEHARNLEDVRKAL 401          
BLAST of Ggra8898.t1 vs. uniprot
Match: R7Q5L2 (FCP1 homology domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5L2_CHOCR)

HSP 1 Score: 292 bits (747), Expect = 2.940e-93
Identity = 165/317 (52.05%), Postives = 209/317 (65.93%), Query Frame = 0
Query:  116 PLDIIHSVAXXXXXXXXXPVGDTPSPTPRTGVFSIFSPRNGKSTSP--LRRLF--SPRWFSA---------------PPVERDTESTITN---NPPRR---MNVVCSCFARPQTVDESLP--DYDYVEHIKSLEPTYEPEPPLLPTPSPHAEDRICLVLDLDETLVHSSFTPLPN-ADFEVPLDMQGEIHTVYVKKRPGVDNFLKKASEWFEIVIFTASLALYANPVVDLLDPHNLVELRLYREHCVLIGGCYVKDIAKLGRDLKRTVIIDNSPLSYVLQPENAIPISAFFTDDNDRELDKTLALLEQARNLEDVRK 404
            P D+IHSV             + PSP        +FSPR+    +P   RRL   SP   S+                 V    ES+I     +PP++   +   C CF +  T ++       ++   ++SLEPTYEP+ PLLP+  P+ +DRICLVLDLDETLVHSSF P P+ +DF VPL+M G+ HTVYVKKRP VD FL   S+ FE+V+FTASLALYANPV+D+LDP   V+LRLYREHCVL+GGCYVKD+ KLGRDLKR  I+DNSPLSY LQPENAIPIS+++ D+NDREL+KTL+ LEQA+NL+DVR+
Sbjct:    7 PADVIHSVPQSPGANAP----NLPSPEVARSRRFVFSPRSDFPKTPPAFRRLLPTSPHRRSSHGFFGGADRRPVSDIDDVRESDESSIPPFIPSPPKKKTWLERTCGCFGKTPTPEDETERISAEHAHWLRSLEPTYEPKSPLLPSLPPNTKDRICLVLDLDETLVHSSFDPFPSGSDFSVPLEMPGDKHTVYVKKRPFVDEFLATCSQSFEVVVFTASLALYANPVMDVLDPSRHVKLRLYREHCVLVGGCYVKDMRKLGRDLKRVFILDNSPLSYALQPENAIPISSWYDDENDRELEKTLSRLEQAKNLKDVRQ 319          
BLAST of Ggra8898.t1 vs. uniprot
Match: A0A1X6PAR8 (FCP1 homology domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PAR8_PORUM)

HSP 1 Score: 252 bits (644), Expect = 3.580e-74
Identity = 126/187 (67.38%), Postives = 146/187 (78.07%), Query Frame = 0
Query:  218 IKSLEPTYEPEPPLLPTPS-PHAEDRICLVLDLDETLVHSSFTPLPNADFEVPLDMQGEIHTVYVKKRPGVDNFLKKASEWFEIVIFTASLALYANPVVDLLDPHNLVELRLYREHCVLIGGCYVKDIAKLGRDLKRTVIIDNSPLSYVLQPENAIPISAFFTDDNDRELDKTLALLEQARNLEDVR 403
            + +L PTYEP  PLLP P+ P    RI LVLDLDETLVHSSF P+ +ADF +PL M G+ H V+V+KRP VD FL   S W+E+++FTASLALYANPVVD LD    V  RLYREHCVL+G  +VKD+A+LGR L RT+IIDNSPLSYVLQPENA+PIS F  D NDRELDKTLA LE AR+LEDVR
Sbjct:  310 LANLTPTYEPTGPLLPEPATPELSRRITLVLDLDETLVHSSFVPMVDADFVLPLQMGGDTHMVFVRKRPRVDAFLAAVSRWYEVIVFTASLALYANPVVDELDNGRAVHGRLYREHCVLVGSHFVKDLARLGRPLSRTLIIDNSPLSYVLQPENAVPISGFVDDPNDRELDKTLAFLEAARHLEDVR 496          
BLAST of Ggra8898.t1 vs. uniprot
Match: A0A7S1TDB2 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDB2_9RHOD)

HSP 1 Score: 232 bits (591), Expect = 4.860e-70
Identity = 107/183 (58.47%), Postives = 142/183 (77.60%), Query Frame = 0
Query:  223 PTYEPEPPLLPTPSPHAEDRICLVLDLDETLVHSSFTPLPNADFEVPLDMQGEIHTVYVKKRPGVDNFLKKASEWFEIVIFTASLALYANPVVDLLDPHNLVELRLYREHCVLIGGCYVKDIAKLGRDLKRTVIIDNSPLSYVLQPENAIPISAFFTDDNDRELDKTLALLEQARNLEDVRKA 405
            P   PE PLLP  S    ++I LVLDLDETLVHS+F P+  A F +PLDM GE H VYV+KRPGV++FLK  ++W+E+V+FTASLALYANPV+D LDP + V  RL+REHCV + G YVKD++ LGRD+++ +IIDNSP++Y  QPENA+P  ++ +D +DRELD+ L +LE+A+ L+DVR A
Sbjct:  122 PDVVPEAPLLPPASADCANKITLVLDLDETLVHSTFVPVKEAHFTIPLDMGGETHVVYVQKRPGVEHFLKTVAQWYEVVVFTASLALYANPVIDRLDPTHCVRHRLFREHCVFVDGNYVKDLSLLGRDIRKVIIIDNSPVTYAFQPENALPSISWVSDPDDRELDEFLEILEKAKTLKDVRNA 304          
BLAST of Ggra8898.t1 vs. uniprot
Match: A0A4P9Z2R5 (HAD-like domain-containing protein (Fragment) n=2 Tax=Zoopagales TaxID=78899 RepID=A0A4P9Z2R5_9FUNG)

HSP 1 Score: 206 bits (525), Expect = 2.060e-61
Identity = 102/190 (53.68%), Postives = 136/190 (71.58%), Query Frame = 0
Query:  213 DYVEHIKSLEPTYEPEPPLLPTPSPHAEDRICLVLDLDETLVHSSFTPLPNADFEVPLDMQGEIHTVYVKKRPGVDNFLKKASEWFEIVIFTASLALYANPVVDLLDPHNLVELRLYREHCVLIGGCYVKDIAKLGRDLKRTVIIDNSPLSYVLQPENAIPISAFFTDDNDRELDKTLALLEQARNLEDV 402
            DY  H  SL    EP   LLP+  P    R CLVLDLDETLVHSSF  +P AD+ VP++++ ++H VYV KRPGVD F+++  E FE+V+FTASL+ YA+PV+DLLD H +V  RL+RE C    G YVKD+++LGRDL+ T+IIDNSP SY+L P NA+PI+++F D +D EL   +  LE  R+++DV
Sbjct:   22 DYTLH--SLCAQSEPIRYLLPSLRPEHHGRKCLVLDLDETLVHSSFKMIPQADYIVPVEIENQVHNVYVLKRPGVDEFMRRMGEHFEVVVFTASLSKYADPVLDLLDKHKVVHHRLFREACYNYKGNYVKDLSQLGRDLRHTIIIDNSPASYILHPTNAVPITSWFNDPHDTELLDMIPFLEDLRDVDDV 209          
BLAST of Ggra8898.t1 vs. uniprot
Match: A0A8C9RZ00 (Protein-serine/threonine phosphatase n=5 Tax=Teleostei TaxID=32443 RepID=A0A8C9RZ00_SCLFO)

HSP 1 Score: 206 bits (523), Expect = 1.630e-60
Identity = 96/172 (55.81%), Postives = 124/172 (72.09%), Query Frame = 0
Query:  231 LLPTPSPHAEDRICLVLDLDETLVHSSFTPLPNADFEVPLDMQGEIHTVYVKKRPGVDNFLKKASEWFEIVIFTASLALYANPVVDLLDPHNLVELRLYREHCVLIGGCYVKDIAKLGRDLKRTVIIDNSPLSYVLQPENAIPISAFFTDDNDRELDKTLALLEQARNLEDV 402
            LLP  +P  +D+IC+V+DLDETLVHSSF P+ NADF VP++++G  H VYV KRP VD FL +  E FE ++FTASLA YA+PV DLLD   +   RL+RE CV   GCYVKD+++LGRDL RT+I+DNSP SY+  PENA+P+ ++F D  D EL   L + E+    EDV
Sbjct:   77 LLPEVTPQDQDKICVVIDLDETLVHSSFKPISNADFIVPVEIEGTTHQVYVLKRPHVDEFLHRMGEMFECILFTASLAKYADPVTDLLDQSGVFRARLFRESCVFHQGCYVKDLSRLGRDLHRTLILDNSPASYIFHPENAVPVVSWFDDTEDTELLNLLPVFEELSQAEDV 248          
BLAST of Ggra8898.t1 vs. uniprot
Match: A0A0P7VCS6 (Protein-serine/threonine phosphatase n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7VCS6_SCLFO)

HSP 1 Score: 206 bits (523), Expect = 1.900e-60
Identity = 96/172 (55.81%), Postives = 124/172 (72.09%), Query Frame = 0
Query:  231 LLPTPSPHAEDRICLVLDLDETLVHSSFTPLPNADFEVPLDMQGEIHTVYVKKRPGVDNFLKKASEWFEIVIFTASLALYANPVVDLLDPHNLVELRLYREHCVLIGGCYVKDIAKLGRDLKRTVIIDNSPLSYVLQPENAIPISAFFTDDNDRELDKTLALLEQARNLEDV 402
            LLP  +P  +D+IC+V+DLDETLVHSSF P+ NADF VP++++G  H VYV KRP VD FL +  E FE ++FTASLA YA+PV DLLD   +   RL+RE CV   GCYVKD+++LGRDL RT+I+DNSP SY+  PENA+P+ ++F D  D EL   L + E+    EDV
Sbjct:   82 LLPEVTPQDQDKICVVIDLDETLVHSSFKPISNADFIVPVEIEGTTHQVYVLKRPHVDEFLHRMGEMFECILFTASLAKYADPVTDLLDQSGVFRARLFRESCVFHQGCYVKDLSRLGRDLHRTLILDNSPASYIFHPENAVPVVSWFDDTEDTELLNLLPVFEELSQAEDV 253          
BLAST of Ggra8898.t1 vs. uniprot
Match: A0A8C5P733 (Protein-serine/threonine phosphatase n=2 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5P733_9ANUR)

HSP 1 Score: 206 bits (523), Expect = 2.420e-60
Identity = 95/176 (53.98%), Postives = 129/176 (73.30%), Query Frame = 0
Query:  231 LLPTPSPHAEDRICLVLDLDETLVHSSFTPLPNADFEVPLDMQGEIHTVYVKKRPGVDNFLKKASEWFEIVIFTASLALYANPVVDLLDPHNLVELRLYREHCVLIGGCYVKDIAKLGRDLKRTVIIDNSPLSYVLQPENAIPISAFFTDDNDRELDKTLALLEQARNLEDVRKAL 406
            LLP  +P  + +IC+V+DLDETLVHSSF P+ NADF VP++++G  H VYV KRP VD FL++  E +E V+FTASLA YA+PV DLLD H +   RL+RE CV   GCYVKD+++LGRDLK+T+I+DNSP SY+  PENA+P+ ++F D  D EL   + + E+  + ED+  +L
Sbjct:   90 LLPEVTPADKGKICMVIDLDETLVHSSFKPISNADFIVPVEIEGTTHQVYVLKRPYVDEFLERMGELYECVLFTASLAKYADPVTDLLDKHGVFRSRLFREACVFHQGCYVKDLSRLGRDLKKTIILDNSPASYIFHPENAVPVQSWFDDIGDTELLSLIPIFEELSDSEDIYTSL 265          
BLAST of Ggra8898.t1 vs. uniprot
Match: A0A7S4PB17 (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PB17_9EUKA)

HSP 1 Score: 204 bits (520), Expect = 3.060e-60
Identity = 96/176 (54.55%), Postives = 130/176 (73.86%), Query Frame = 0
Query:  231 LLPTPSPHAEDRICLVLDLDETLVHSSFTPLPNADFEVPLDMQGEIHTVYVKKRPGVDNFLKKASEWFEIVIFTASLALYANPVVDLLDPHNLVELRLYREHCVLIGGCYVKDIAKLGRDLKRTVIIDNSPLSYVLQPENAIPISAFFTDDNDRELDKTLALLEQARNLEDVRKAL 406
            LLP   P    + CLVLDLDETLVHSSF P+ NADF +P++++ ++H VYV KRPGVD+F+K   + FEIV+FTASL+ YA+PV+DLLD H +V  RL+R+ C    G YVKD+ +LGRDLK+T+IIDN+P S++  P+NAIPI ++F DD+D EL   +  L+    +EDVR+ L
Sbjct:   61 LLPPMLPEDRGKQCLVLDLDETLVHSSFKPIANADFIIPVEIEDQVHQVYVLKRPGVDHFMKVCGKLFEIVVFTASLSKYADPVLDLLDKHRVVRYRLFRDACSQYKGSYVKDLGRLGRDLKKTIIIDNAPASFLWHPQNAIPIISWFDDDSDTELIDLVPFLQDITKVEDVREVL 236          
BLAST of Ggra8898.t1 vs. uniprot
Match: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 isoform X2 n=1 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7E681C (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 isoform X2 n=1 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7E681C)

HSP 1 Score: 205 bits (521), Expect = 9.540e-60
Identity = 94/172 (54.65%), Postives = 128/172 (74.42%), Query Frame = 0
Query:  231 LLPTPSPHAEDRICLVLDLDETLVHSSFTPLPNADFEVPLDMQGEIHTVYVKKRPGVDNFLKKASEWFEIVIFTASLALYANPVVDLLDPHNLVELRLYREHCVLIGGCYVKDIAKLGRDLKRTVIIDNSPLSYVLQPENAIPISAFFTDDNDRELDKTLALLEQARNLEDV 402
            LLP  +P  + ++C+V+DLDETLVHSSF P+ NADF VP++++G  H VYV KRP VD FL++  E FE V+FTASLA YA+PV DLLD H + ++RL+RE CV   GCYVKD+++LGRDL RT+I+DNSP SY+  PENA+P+ ++F D +D EL   + + E+    E+V
Sbjct:  113 LLPEVTPQDQGKVCVVIDLDETLVHSSFKPISNADFIVPVEIEGTTHQVYVLKRPHVDEFLRRMGELFECVLFTASLAKYADPVTDLLDKHGVFQVRLFRESCVFHQGCYVKDLSRLGRDLGRTLILDNSPASYIFHPENAVPVVSWFDDLDDTELLNLIPVFEELSQAENV 284          
The following BLAST results are available for this feature:
BLAST of Ggra8898.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5P54.050e-17877.58Carboxy-terminal domain RNA polymerase II polypept... [more]
R7Q5L22.940e-9352.05FCP1 homology domain-containing protein n=1 Tax=Ch... [more]
A0A1X6PAR83.580e-7467.38FCP1 homology domain-containing protein n=1 Tax=Po... [more]
A0A7S1TDB24.860e-7058.47Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A4P9Z2R52.060e-6153.68HAD-like domain-containing protein (Fragment) n=2 ... [more]
A0A8C9RZ001.630e-6055.81Protein-serine/threonine phosphatase n=5 Tax=Teleo... [more]
A0A0P7VCS61.900e-6055.81Protein-serine/threonine phosphatase n=2 Tax=Scler... [more]
A0A8C5P7332.420e-6053.98Protein-serine/threonine phosphatase n=2 Tax=Lepto... [more]
A0A7S4PB173.060e-6054.55Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 isoform X2 n=1 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7E681C9.540e-6054.65carboxy-terminal domain RNA polymerase II polypept... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004274FCP1 homology domainSMARTSM00577forpap2coord: 241..384
e-value: 4.0E-66
score: 235.7
IPR004274FCP1 homology domainPFAMPF03031NIFcoord: 244..403
e-value: 4.0E-53
score: 179.4
IPR004274FCP1 homology domainPROSITEPS50969FCP1coord: 238..396
score: 44.409588
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 229..407
e-value: 1.2E-63
score: 215.9
IPR011948Dullard phosphatase domain, eukaryoticTIGRFAMTIGR02251TIGR02251coord: 243..405
e-value: 1.1E-59
score: 198.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..36
NoneNo IPR availablePANTHERPTHR12210:SF145CTD SMALL PHOSPHATASE-LIKE PROTEIN 1coord: 220..404
NoneNo IPR availablePANTHERPTHR12210NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATEDcoord: 220..404
NoneNo IPR availableCDDcd07521HAD_FCP1-likecoord: 242..374
e-value: 6.75469E-62
score: 193.966
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 231..406

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:683776..684999 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8898.t1Ggra8898.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 683776..684999 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8898.t1 ID=Ggra8898.t1|Name=Ggra8898.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=408bp
MSDSPDAASKAASEAAQVATSAESHPISSSASTDFATIAADAAHSKTAPQ
PSVPITTPSSEPTAETNHDSFAEPSNSASRTPSSDSDDGDTIVDEPPTKQ
PVSPVSTASGQSPTPPLDIIHSVANTSPVPPLSPVGDTPSPTPRTGVFSI
FSPRNGKSTSPLRRLFSPRWFSAPPVERDTESTITNNPPRRMNVVCSCFA
RPQTVDESLPDYDYVEHIKSLEPTYEPEPPLLPTPSPHAEDRICLVLDLD
ETLVHSSFTPLPNADFEVPLDMQGEIHTVYVKKRPGVDNFLKKASEWFEI
VIFTASLALYANPVVDLLDPHNLVELRLYREHCVLIGGCYVKDIAKLGRD
LKRTVIIDNSPLSYVLQPENAIPISAFFTDDNDRELDKTLALLEQARNLE
DVRKALT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004274FCP1_dom
IPR023214HAD_sf
IPR011948Dullard_phosphatase
IPR036412HAD-like_sf