Ggra6632.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra6632.t1
Unique Name	Ggra6632.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	432

Homology

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BLAST of Ggra6632.t1 vs. uniprot
Match: A0A2V3IHC4 (Mitotic spindle checkpoint protein BUBR1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHC4_9FLOR)

HSP 1 Score: 278 bits (710), Expect = 4.030e-81
Identity = 194/527 (36.81%), Postives = 252/527 (47.82%), Query Frame = 0

Query:   42 DASRRGPSPVHKQNVDSYNRPPSPTINTKTALPDIGDILNSSFPIEQTDNAKISVPEN-----------------------------------------KRGMSPV--HNSHAEP-------------------------------------TGYDELELTKYLRTWAVDQPSVQFMGDVPVNVEPDTM--------------ESQCDGFNQRSRVFFVEYMDKDFVEADMSVSCTGDVDDVALFVLKQSYSSKIWELYINQTIQKRFQKKLTQTDSIPLAIGFSHVTGASFLVLDTKGVACLTRILQITPRNVLPESLAMFLTVDLLETLYMLHEIDFIHSDVTRDNVLFRRNTAVELVRDVY---------------------------------------------NSFVPKHYRPRNFSGWGFIVDCHGAAVCAANKLVVTLDNTDSGPVALKHEEVWKSFFTDIWRLGRHRDQHRLLRKCNAISNYESMELVLEQDRKLVFEVGTLFRVVAYSLEADADTTR 429
            + SR  P P   Q  D +NRPPSPTINTK A+ +I D+ NSS P++Q  N K+    N                                         KR + P+  H+S AEP                                     T Y E EL+++ R W ++QPS Q++G   V++EPDT+               SQ  G   RS VFFVE M+ +   +  ++  T D D++ L VLKQS    +WE YI QTIQKR +KKL QTDSIPLA+GFS    +SFLVLDTKG+  L+ I+   P  V+PE++AM  TVDLL+TL +LH I  IHSDVT +NVLFR NTA+EL  + Y                                              SF+ + YR  N   WGF  DC GAAVCA+  L VT  N   GPVAL+H EVWK+FF D  +LG+    +  +       N E+ME +L  +  L F V  L+RV++ SLE D  TTR
Sbjct:  417 ELSRGDPIP---QQADRFNRPPSPTINTKIAMREIDDMFNSSLPLQQV-NLKVPSTLNPARAERPDVQSFNVFNDENTAQNTTTGGEPKTSDEPVKDMRKRVLQPLDLHHSAAEPATSSTSLAPTSENQSNLNQQSQSRTEEHHGEMLPRSDTTYSETELSEFFRAWVIEQPSYQYIGSTKVDIEPDTIVELPWRVPLTFCVDPSQSAGRCGRSTVFFVEDMENELGVSGATMPGTHDEDEIPLLVLKQSSPPNVWEYYIYQTIQKRLRKKLIQTDSIPLALGFSQGKRSSFLVLDTKGINSLSDIMPHVPDRVIPEAVAMLFTVDLLKTLCILHGIGIIHSDVTLENVLFRWNTAIELTAEAYCPSGDEGWSACGILLVDFNNSIDAQHERFEGSGIEAVVQHSSTVDPSFIDQQYREANSKSWGFSADCFGAAVCASKMLGVTTQNLVCGPVALRHSEVWKNFFDDALQLGQLATPNETIAMMRR--NCEAMERILANNTHLGFVVRKLYRVIS-SLEID--TTR 934

The following BLAST results are available for this feature:

BLAST of Ggra6632.t1 vs. uniprot

BLAST of Ggra6632.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IHC4	4.030e-81	36.81	Mitotic spindle checkpoint protein BUBR1 n=1 Tax=G...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 174..315 e-value: 1.2E-18 score: 68.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..43
None	No IPR available	PANTHER	PTHR14030:SF4	BUB1 KINASE, ISOFORM A-RELATED	coord: 192..313
IPR015661	Mitotic spindle checkpoint protein Bub1/Mad3	PANTHER	PTHR14030	MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1	coord: 192..313
IPR008266	Tyrosine-protein kinase, active site	PROSITE	PS00109	PROTEIN_KINASE_TYR	coord: 286..298
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 193..301

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000859_pilon	contig	tig00000859_pilon:300468..302036 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra6632.t1	Ggra6632.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000859_pilon 300468..302036 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra6632.t1 ID=Ggra6632.t1|Name=Ggra6632.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=432bp
MKSINLENHLLLKIKNMVNLPHQMRTTKTQTKPQTSPVSSPDASRRGPSP
VHKQNVDSYNRPPSPTINTKTALPDIGDILNSSFPIEQTDNAKISVPENK
RGMSPVHNSHAEPTGYDELELTKYLRTWAVDQPSVQFMGDVPVNVEPDTM
ESQCDGFNQRSRVFFVEYMDKDFVEADMSVSCTGDVDDVALFVLKQSYSS
KIWELYINQTIQKRFQKKLTQTDSIPLAIGFSHVTGASFLVLDTKGVACL
TRILQITPRNVLPESLAMFLTVDLLETLYMLHEIDFIHSDVTRDNVLFRR
NTAVELVRDVYNSFVPKHYRPRNFSGWGFIVDCHGAAVCAANKLVVTLDN
TDSGPVALKHEEVWKSFFTDIWRLGRHRDQHRLLRKCNAISNYESMELVL
EQDRKLVFEVGTLFRVVAYSLEADADTTRRN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015661	Bub1/Mad3
IPR008266	Tyr_kinase_AS
IPR011009	Kinase-like_dom_sf