Ggra10282.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10282.t1
Unique NameGgra10282.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length302
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:368365..369270 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10282Ggra10282Gracilaria gracilis GNS1m malegenetig00000016_pilon 368365..369270 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10282.t1.start1Ggra10282.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 368365..368367 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10282.t1.CDS1Ggra10282.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 368365..369270 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10282.t1.exon1Ggra10282.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 368365..369270 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10282.t1.stop1Ggra10282.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 369268..369270 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10282.t1Ggra10282.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 368365..369270 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10282.t1 ID=Ggra10282.t1|Name=Ggra10282.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=302bp
MKRRPSVPLSELDHRSRQPLQVVQLERAENVRAYVHPRFPRPHKRIRINW
TDEENSLFFDTIKKNSNKDEQTVLREIVSALGGSRSWVQCKGHFRNLFAV
GRITREKGKSKSWTVHEEVNGKEKDSKDEPTQTSTARNGETETKPIAPLP
PNASTRTTSGNMSVSNESISGTHVQEETVKVDNRPTETPNGHVRRSASIG
RLMNPASQDENDRPAPSAYKVQSKINDERRHPEYHVLRGKDARATENGHI
SSQTTRVAGRQNYDVCRVRETAIFMSKQAAAKEAYERSSCEPVKTSDQTK
V*
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spliced messenger RNA

>Ggra10282.t1 ID=Ggra10282.t1|Name=Ggra10282.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=906bp|location=Sequence derived from alignment at tig00000016_pilon:368365..369270+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAAAGACGTCCTTCAGTCCCTCTCTCTGAACTAGATCACAGGAGCAG
ACAACCTCTGCAGGTTGTTCAACTGGAGCGTGCCGAGAACGTCAGAGCAT
ACGTTCACCCAAGGTTTCCCCGTCCACATAAACGCATTCGAATCAACTGG
ACTGATGAAGAGAATTCTCTGTTTTTCGACACAATAAAGAAGAATTCAAA
CAAGGACGAACAAACGGTCCTTCGTGAGATTGTTTCGGCTTTGGGTGGAT
CCCGTAGCTGGGTTCAATGCAAGGGACACTTTCGAAATTTGTTTGCTGTG
GGAAGAATCACTCGTGAGAAGGGAAAATCAAAATCATGGACTGTACATGA
AGAGGTGAATGGAAAGGAGAAGGATAGTAAAGACGAACCTACTCAAACAT
CAACAGCTAGGAATGGAGAAACGGAAACAAAGCCAATCGCTCCTCTTCCG
CCGAACGCTTCAACTAGAACAACAAGTGGTAACATGAGCGTTTCCAACGA
ATCCATTTCGGGCACTCACGTGCAGGAAGAAACTGTCAAGGTGGACAACA
GGCCTACTGAAACTCCAAATGGTCACGTTAGGAGAAGTGCCAGCATTGGT
CGCCTCATGAATCCTGCCTCACAAGATGAGAATGACAGACCCGCACCGAG
TGCATATAAAGTGCAGAGTAAGATCAACGACGAACGTCGACATCCAGAGT
ATCATGTTTTACGTGGGAAGGATGCTAGGGCCACTGAAAATGGTCATATA
AGCTCTCAGACCACAAGAGTAGCTGGGCGGCAGAACTATGATGTTTGTCG
AGTCAGAGAGACTGCTATCTTTATGAGCAAACAGGCGGCTGCAAAGGAAG
CATATGAGCGATCAAGCTGTGAACCAGTGAAGACTAGTGATCAGACGAAA
GTTTGA
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protein sequence of Ggra10282.t1

>Ggra10282.t1 ID=Ggra10282.t1|Name=Ggra10282.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=302bp
MKRRPSVPLSELDHRSRQPLQVVQLERAENVRAYVHPRFPRPHKRIRINW
TDEENSLFFDTIKKNSNKDEQTVLREIVSALGGSRSWVQCKGHFRNLFAV
GRITREKGKSKSWTVHEEVNGKEKDSKDEPTQTSTARNGETETKPIAPLP
PNASTRTTSGNMSVSNESISGTHVQEETVKVDNRPTETPNGHVRRSASIG
RLMNPASQDENDRPAPSAYKVQSKINDERRHPEYHVLRGKDARATENGHI
SSQTTRVAGRQNYDVCRVRETAIFMSKQAAAKEAYERSSCEPVKTSDQTK
V*
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mRNA from alignment at tig00000016_pilon:368365..369270+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10282.t1 ID=Ggra10282.t1|Name=Ggra10282.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=906bp|location=Sequence derived from alignment at tig00000016_pilon:368365..369270+ (Gracilaria gracilis GNS1m male)
ATGAAAAGACGTCCTTCAGTCCCTCTCTCTGAACTAGATCACAGGAGCAG
ACAACCTCTGCAGGTTGTTCAACTGGAGCGTGCCGAGAACGTCAGAGCAT
ACGTTCACCCAAGGTTTCCCCGTCCACATAAACGCATTCGAATCAACTGG
ACTGATGAAGAGAATTCTCTGTTTTTCGACACAATAAAGAAGAATTCAAA
CAAGGACGAACAAACGGTCCTTCGTGAGATTGTTTCGGCTTTGGGTGGAT
CCCGTAGCTGGGTTCAATGCAAGGGACACTTTCGAAATTTGTTTGCTGTG
GGAAGAATCACTCGTGAGAAGGGAAAATCAAAATCATGGACTGTACATGA
AGAGGTGAATGGAAAGGAGAAGGATAGTAAAGACGAACCTACTCAAACAT
CAACAGCTAGGAATGGAGAAACGGAAACAAAGCCAATCGCTCCTCTTCCG
CCGAACGCTTCAACTAGAACAACAAGTGGTAACATGAGCGTTTCCAACGA
ATCCATTTCGGGCACTCACGTGCAGGAAGAAACTGTCAAGGTGGACAACA
GGCCTACTGAAACTCCAAATGGTCACGTTAGGAGAAGTGCCAGCATTGGT
CGCCTCATGAATCCTGCCTCACAAGATGAGAATGACAGACCCGCACCGAG
TGCATATAAAGTGCAGAGTAAGATCAACGACGAACGTCGACATCCAGAGT
ATCATGTTTTACGTGGGAAGGATGCTAGGGCCACTGAAAATGGTCATATA
AGCTCTCAGACCACAAGAGTAGCTGGGCGGCAGAACTATGATGTTTGTCG
AGTCAGAGAGACTGCTATCTTTATGAGCAAACAGGCGGCTGCAAAGGAAG
CATATGAGCGATCAAGCTGTGAACCAGTGAAGACTAGTGATCAGACGAAA
GTTTGA
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Coding sequence (CDS) from alignment at tig00000016_pilon:368365..369270+

>Ggra10282.t1 ID=Ggra10282.t1|Name=Ggra10282.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=906bp|location=Sequence derived from alignment at tig00000016_pilon:368365..369270+ (Gracilaria gracilis GNS1m male)
ATGAAAAGACGTCCTTCAGTCCCTCTCTCTGAACTAGATCACAGGAGCAG
ACAACCTCTGCAGGTTGTTCAACTGGAGCGTGCCGAGAACGTCAGAGCAT
ACGTTCACCCAAGGTTTCCCCGTCCACATAAACGCATTCGAATCAACTGG
ACTGATGAAGAGAATTCTCTGTTTTTCGACACAATAAAGAAGAATTCAAA
CAAGGACGAACAAACGGTCCTTCGTGAGATTGTTTCGGCTTTGGGTGGAT
CCCGTAGCTGGGTTCAATGCAAGGGACACTTTCGAAATTTGTTTGCTGTG
GGAAGAATCACTCGTGAGAAGGGAAAATCAAAATCATGGACTGTACATGA
AGAGGTGAATGGAAAGGAGAAGGATAGTAAAGACGAACCTACTCAAACAT
CAACAGCTAGGAATGGAGAAACGGAAACAAAGCCAATCGCTCCTCTTCCG
CCGAACGCTTCAACTAGAACAACAAGTGGTAACATGAGCGTTTCCAACGA
ATCCATTTCGGGCACTCACGTGCAGGAAGAAACTGTCAAGGTGGACAACA
GGCCTACTGAAACTCCAAATGGTCACGTTAGGAGAAGTGCCAGCATTGGT
CGCCTCATGAATCCTGCCTCACAAGATGAGAATGACAGACCCGCACCGAG
TGCATATAAAGTGCAGAGTAAGATCAACGACGAACGTCGACATCCAGAGT
ATCATGTTTTACGTGGGAAGGATGCTAGGGCCACTGAAAATGGTCATATA
AGCTCTCAGACCACAAGAGTAGCTGGGCGGCAGAACTATGATGTTTGTCG
AGTCAGAGAGACTGCTATCTTTATGAGCAAACAGGCGGCTGCAAAGGAAG
CATATGAGCGATCAAGCTGTGAACCAGTGAAGACTAGTGATCAGACGAAA
GTTTGA
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