Ggra10282.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10282.t1
Unique NameGgra10282.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length302
Homology
BLAST of Ggra10282.t1 vs. uniprot
Match: A0A2V3IES1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IES1_9FLOR)

HSP 1 Score: 207 bits (526), Expect = 3.550e-60
Identity = 136/313 (43.45%), Postives = 185/313 (59.11%), Query Frame = 0
Query:    1 MKRRPSVPLSELDHRSRQPLQVVQLERAENVRAYVHPRFPRPHKRIRINWTDEENSLFFDTIKKNSNKDEQTVLREIVSALGGSRSWVQCKGHFRNLFAVGRITREKGKSKSWTVHEEVNGKEKDSKDEPTQTSTARNGE--------TETKPIAPLPPNASTRTTSGNMSVSNESISGTHVQEETVKVDNRPTETPNG---HVRRSASIGRLMNPASQDENDRPAPSAYKVQSKINDERRH-----PEYHVLRGKDARATENGHISSQTTRVAGRQNYDVCRVRETAIFMSKQAAAKEAYERSSCEPVKTSD 297
            +KR  SV L EL+ R+R PLQ+V   R +N+R  ++PR PRP+KRIR NWTD EN+LFFD IKKN+N+DE TVLRE VSAL GSRSWVQCKGHFRNL +VG+IT+ K   + W VHEE + K +++   PT+  T+   E             I+   P +ST     N S    S +  + +++T + DN      NG      RSASI  L+N  SQ+ ++R A   ++  +   D+ +      P  + +R  DA      H  + +  V+G Q+  V R RETAIFMSKQAAAKEA+ERS+ +  + SD
Sbjct:  134 LKRYSSVSLPELEQRTRTPLQLVTAGRRDNIRTLLNPRGPRPNKRIRNNWTDAENALFFDIIKKNANEDETTVLREAVSALHGSRSWVQCKGHFRNLLSVGKITQNKKGRQLWEVHEEASIKSEEAPRIPTKALTSSKYEEPRGKSVKANGSHISSTAPQSSTHNQENNPS----SATNVNTRKKTERQDNIQNNFRNGTGAKTGRSASIDCLINNISQERDNRKAQMLHRTNAVDGDQSQREIIGRPRENSIRSNDA------HFVAGSEGVSGEQDVIVGRDRETAIFMSKQAAAKEAFERSNPDATRESD 436          
BLAST of Ggra10282.t1 vs. uniprot
Match: R7QLJ1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLJ1_CHOCR)

HSP 1 Score: 94.4 bits (233), Expect = 4.540e-18
Identity = 49/115 (42.61%), Postives = 74/115 (64.35%), Query Frame = 0
Query:    2 KRRPSVPLSELDHRSRQPLQVVQLERAENVRAYVHPRFPRPHKRIRINWTDEENSLFFDTIKKNSNKDEQTVLREIVSALGGSRSWVQCKGHFRNLFAVGRITREKGKSKSWTVH 116
            KR  S P  ++DH           E  EN+     PR     KR+RINWT++EN +FFDT+++++  DEQ+++R IV+ +GG R+W QCKGHFRNL  V +I+ ++ K+K W+V+
Sbjct:  150 KRPSSAPNGDMDH-------YASREGDENM-----PRL----KRVRINWTNQENGIFFDTVRRSATLDEQSLIRAIVANMGGKRNWTQCKGHFRNLVFVNKISLDE-KTKKWSVN 247          
BLAST of Ggra10282.t1 vs. uniprot
Match: A0A7S0ZF12 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZF12_9RHOD)

HSP 1 Score: 62.0 bits (149), Expect = 2.850e-7
Identity = 35/86 (40.70%), Postives = 45/86 (52.33%), Query Frame = 0
Query:   44 KRIRINWTDEENSLFFDTIKKNSNKDEQTVLREIVSALGGSRSWVQCKGHFRNLFAVGRITREKGKSKSWTVHEEVNGKEKDSKDE 129
            KR+R+NWT EE  +    IK N  +  + VL EI   L G RS  QCKGH RNL    R+  ++  S  W      N  +KD +DE
Sbjct:  230 KRMRMNWTHEEEDVVKQIIKDNEGQTYKVVLGEIQKQLDGKRSQTQCKGHLRNLLKSNRVKMDESTSLFW------NHDKKDDEDE 309          
The following BLAST results are available for this feature:
BLAST of Ggra10282.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IES13.550e-6043.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QLJ14.540e-1842.61Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZF122.850e-740.70Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..131
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 49..98
e-value: 0.00523103
score: 32.5474
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 45..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:368365..369270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10282.t1Ggra10282.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 368365..369270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10282.t1 ID=Ggra10282.t1|Name=Ggra10282.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=302bp
MKRRPSVPLSELDHRSRQPLQVVQLERAENVRAYVHPRFPRPHKRIRINW
TDEENSLFFDTIKKNSNKDEQTVLREIVSALGGSRSWVQCKGHFRNLFAV
GRITREKGKSKSWTVHEEVNGKEKDSKDEPTQTSTARNGETETKPIAPLP
PNASTRTTSGNMSVSNESISGTHVQEETVKVDNRPTETPNGHVRRSASIG
RLMNPASQDENDRPAPSAYKVQSKINDERRHPEYHVLRGKDARATENGHI
SSQTTRVAGRQNYDVCRVRETAIFMSKQAAAKEAYERSSCEPVKTSDQTK
V*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf