Ggra10216.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10216.t1
Unique NameGgra10216.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length487
Homology
BLAST of Ggra10216.t1 vs. uniprot
Match: A0A2V3ILG6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILG6_9FLOR)

HSP 1 Score: 248 bits (632), Expect = 1.570e-72
Identity = 168/485 (34.64%), Postives = 261/485 (53.81%), Query Frame = 0
Query:    1 MRLSNWRWLGPVPAAFVLQAVFGLQFANGVFASFLDDAVLTQALGLAALFVSLGITAFGVLLYYASDHSKYHA--VPRAVAVFGSVAVAAQLFVSYGLVNHSRFIVYLASVLQGTGAGCIYVVSIVVVQDWVPESPALVTGLSLLFGGAGSLFGIYAFQALVHAMDGAIAAMAVASLAAGMLSVTASMFIERPPERWCPVAEIFDPHTTMTLKDAHHERRAAGNDPQMRLVEEQSVCYSAIVEFGDDDLLPHKQKQSESFGRLSCSDILVDPAFALVFVCVFVAAGPGYGFVLSYPLMLHSLFDMALIDANQMLCYATFFGVVGRLALGLAIDIISSSCSNNHSSANIRGSKLSNIFIVVLQTVGLALMPLAIRAECAWLFHAAVFAVFVAFNGGAVVAACLARDVFAAENSTLAFALLGVAVGVARALFSVLLAACAGVAG-------------KGAYDWYIGWSVVVSVAGVVGSYFIEASKC 470
            + L ++R++ PVPA F+LQA+FGL +A GVF + +     T A+GLA+ FVS+GIT  GV +   +  S  HA   P   A+ GSV ++ Q  ++  L   +  ++Y ASVL GTG GCIYV S+ V+Q WVPES   +TG+ +L G AGSLFGIY ++ALV A+   I AMA     +  LS  A+  +++PP  W P  ++                RA G++    L+    + ++A          PH          +S  DIL D +F ++ V      GPG+G VL+Y  ML  +F  A+ +AN +  + TF G+ GRL  G+ +D + S      S+  + G K +N+ ++++Q    A +P  IRA   + F AA   +++ F+GG VVAACL   VF   N++LAF+L+ +++G     FS ++A C+                    Y+ ++  +V+ S+AG+V ++FI  S+C
Sbjct:    7 LLLRDYRYVVPVPACFLLQALFGLLYAQGVFVALVHTPQYTLAIGLASFFVSVGITLSGVSMSKLASSSPSHAQSAPVYAALAGSVGLSGQTVLALALALDNVHLLYAASVLYGTGCGCIYVASVDVLQAWVPESRGFITGVGMLCGAAGSLFGIYIYRALVAALGAPIPAMAFVGAVSAALSFAAAPMLKKPPAGWHPARDL----------------RAGGDEENAPLL----ITHAAQRALHSPPSAPHP-------AVISVRDILRDRSFYMLVVAFAATVGPGFGLVLAYQTMLIDMFGAAISEANNLFFWITFSGLAGRLLAGIGVDALESDVG---SAPRLTGGKRTNMLLLLVQIAATASLPFFIRANMLYAFTAACALIYITFSGGPVVAACLVGAVFDQVNASLAFSLVAISIGAGDMFFSWVVAMCSESTAYPRVLHDRLPRFHASDYNLFLWCTVIWSLAGLVATHFI--SRC 459          
The following BLAST results are available for this feature:
BLAST of Ggra10216.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILG61.570e-7234.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 236..464
e-value: 7.3E-6
score: 26.9
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 2..197
e-value: 1.1E-6
score: 30.2
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 27..465
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 41..398
e-value: 4.2E-17
score: 62.1
NoneNo IPR availablePANTHERPTHR11360MONOCARBOXYLATE TRANSPORTERcoord: 6..435
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 189..265
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 161..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 351..371
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 126..136
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 97..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..188
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 289..307
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 331..350
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 446..465
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 266..288
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 466..486
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 308..330
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 372..376
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..160
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 441..445
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 401..411
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 377..400
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 412..440
NoneNo IPR availableTMHMMTMhelixcoord: 377..399
NoneNo IPR availableTMHMMTMhelixcoord: 103..125
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 443..465
NoneNo IPR availableTMHMMTMhelixcoord: 77..99
NoneNo IPR availableTMHMMTMhelixcoord: 411..433
NoneNo IPR availableTMHMMTMhelixcoord: 166..188
NoneNo IPR availableTMHMMTMhelixcoord: 351..373
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
NoneNo IPR availableTMHMMTMhelixcoord: 271..293
NoneNo IPR availableTMHMMTMhelixcoord: 308..330

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:118030..119490 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10216.t1Ggra10216.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 118030..119490 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10216.t1 ID=Ggra10216.t1|Name=Ggra10216.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=487bp
MRLSNWRWLGPVPAAFVLQAVFGLQFANGVFASFLDDAVLTQALGLAALF
VSLGITAFGVLLYYASDHSKYHAVPRAVAVFGSVAVAAQLFVSYGLVNHS
RFIVYLASVLQGTGAGCIYVVSIVVVQDWVPESPALVTGLSLLFGGAGSL
FGIYAFQALVHAMDGAIAAMAVASLAAGMLSVTASMFIERPPERWCPVAE
IFDPHTTMTLKDAHHERRAAGNDPQMRLVEEQSVCYSAIVEFGDDDLLPH
KQKQSESFGRLSCSDILVDPAFALVFVCVFVAAGPGYGFVLSYPLMLHSL
FDMALIDANQMLCYATFFGVVGRLALGLAIDIISSSCSNNHSSANIRGSK
LSNIFIVVLQTVGLALMPLAIRAECAWLFHAAVFAVFVAFNGGAVVAACL
ARDVFAAENSTLAFALLGVAVGVARALFSVLLAACAGVAGKGAYDWYIGW
SVVVSVAGVVGSYFIEASKCVDVDGGNNRVFTDLQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR011701MFS