Ggra10191.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10191.t1
Unique NameGgra10191.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length334
Homology
The following BLAST results are available for this feature:
BLAST of Ggra10191.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 283..306
e-value: 10.0
score: 13.2
coord: 221..244
e-value: 0.13
score: 21.4
coord: 250..273
e-value: 3.8
score: 16.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 223..244
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 252..273
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 221..249
score: 11.302166
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 200..278
e-value: 8.4E-9
score: 37.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 6..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..81
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 36..216
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 221..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:53261..54389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10191.t1Ggra10191.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 53261..54389 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10191.t1 ID=Ggra10191.t1|Name=Ggra10191.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=334bp
MQPASPARSPSLPPKQQPMRLQPRAPPSTPPHHVSPPPPPPPPPPPLSPL
PHLNALSSGAAAAAARVQDARGGGGGGGGVAAHSRALQHYLQQQPPAAGG
TKGAAVLPRLAADFSLTEADALIASAVGDTCLPCAPFEAHTLLPSYVRNG
ASPSALGHYALRAAAAAAARPYAPLALAHGYVDVARGEHANACGELPLPL
AAAHGDAALQWRSAPRAANKWTCNSCSYQFAYKDHLARHRAFVHEGKSES
KCSHCSKIYVEFKSLRRHINQNHMSISASQCSFFCYWCSFRCTQLRMWRS
HILTAHYGESYAHRISWDTWTSLVDSEQANTAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf