Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10191.t1.stop1 | Ggra10191.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000016_pilon 53261..53263 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10191.t1.intron1 | Ggra10191.t1.intron1 | Gracilaria gracilis GNS1m male | intron | tig00000016_pilon 53453..53579 - |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10191.t1.start1 | Ggra10191.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000016_pilon 54387..54389 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10191.t1 ID=Ggra10191.t1|Name=Ggra10191.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=334bp
MQPASPARSPSLPPKQQPMRLQPRAPPSTPPHHVSPPPPPPPPPPPLSPL
PHLNALSSGAAAAAARVQDARGGGGGGGGVAAHSRALQHYLQQQPPAAGG
TKGAAVLPRLAADFSLTEADALIASAVGDTCLPCAPFEAHTLLPSYVRNG
ASPSALGHYALRAAAAAAARPYAPLALAHGYVDVARGEHANACGELPLPL
AAAHGDAALQWRSAPRAANKWTCNSCSYQFAYKDHLARHRAFVHEGKSES
KCSHCSKIYVEFKSLRRHINQNHMSISASQCSFFCYWCSFRCTQLRMWRS
HILTAHYGESYAHRISWDTWTSLVDSEQANTAE* back to topspliced messenger RNA >Ggra10191.t1 ID=Ggra10191.t1|Name=Ggra10191.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1002bp|location=Sequence derived from alignment at tig00000016_pilon:53261..54389- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCAGCCTGCTTCCCCAGCGCGCTCTCCCTCGCTGCCGCCAAAGCAACA
GCCGATGCGGTTGCAACCGCGCGCGCCGCCCTCCACGCCGCCGCACCACG
TCTCGCCGCCGCCGCCGCCGCCGCCGCCACCGCCGCCGCTGTCGCCGCTT
CCGCACCTCAACGCGCTGTCGAGCGGCGCGGCGGCGGCGGCGGCACGCGT
GCAGGACGCGCGCGGCGGCGGCGGCGGCGGCGGCGGCGTTGCGGCGCACA
GCCGCGCGCTTCAGCACTACCTGCAGCAGCAGCCGCCGGCGGCCGGCGGC
ACCAAGGGGGCGGCGGTGCTTCCGCGGCTGGCGGCGGACTTCAGCCTCAC
GGAGGCGGACGCGCTGATCGCCAGCGCGGTGGGCGACACGTGCCTTCCGT
GCGCGCCGTTTGAAGCGCACACGCTGCTGCCAAGCTACGTGCGCAACGGC
GCGTCGCCCAGCGCGCTGGGGCACTACGCGCTGCGCGCGGCGGCGGCGGC
GGCGGCGCGCCCGTACGCGCCGCTGGCGCTGGCGCACGGCTACGTGGACG
TGGCGCGCGGCGAGCACGCGAACGCGTGCGGCGAGCTGCCGCTGCCGCTG
GCGGCGGCGCACGGCGACGCTGCGTTGCAGTGGCGCAGCGCGCCGCGCGC
GGCCAACAAATGGACGTGTAACAGCTGTTCGTACCAGTTTGCTTACAAGG
ACCACCTCGCCAGACACCGCGCGTTCGTGCACGAGGGAAAGAGCGAGAGC
AAATGCAGCCATTGCTCCAAGATCTACGTGGAGTTTAAAAGCCTTCGCCG
ACACATCAACCAAAACCATATGAGCATTTCGGCATCGCAGTGCTCCTTCT
TCTGCTATTGGTGCTCGTTCCGATGCACGCAGCTGCGCATGTGGAGAAGT
CATATCCTGACGGCGCACTACGGCGAGAGCTATGCTCACCGCATTAGCTG
GGACACATGGACAAGTTTGGTTGACTCGGAACAAGCAAACACAGCAGAGT
AA back to topprotein sequence of Ggra10191.t1 >Ggra10191.t1 ID=Ggra10191.t1|Name=Ggra10191.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=334bp
MQPASPARSPSLPPKQQPMRLQPRAPPSTPPHHVSPPPPPPPPPPPLSPL
PHLNALSSGAAAAAARVQDARGGGGGGGGVAAHSRALQHYLQQQPPAAGG
TKGAAVLPRLAADFSLTEADALIASAVGDTCLPCAPFEAHTLLPSYVRNG
ASPSALGHYALRAAAAAAARPYAPLALAHGYVDVARGEHANACGELPLPL
AAAHGDAALQWRSAPRAANKWTCNSCSYQFAYKDHLARHRAFVHEGKSES
KCSHCSKIYVEFKSLRRHINQNHMSISASQCSFFCYWCSFRCTQLRMWRS
HILTAHYGESYAHRISWDTWTSLVDSEQANTAE* back to topmRNA from alignment at tig00000016_pilon:53261..54389- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10191.t1 ID=Ggra10191.t1|Name=Ggra10191.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1129bp|location=Sequence derived from alignment at tig00000016_pilon:53261..54389- (Gracilaria gracilis GNS1m male)
ATGCAGCCTGCTTCCCCAGCGCGCTCTCCCTCGCTGCCGCCAAAGCAACA
GCCGATGCGGTTGCAACCGCGCGCGCCGCCCTCCACGCCGCCGCACCACG
TCTCGCCGCCGCCGCCGCCGCCGCCGCCACCGCCGCCGCTGTCGCCGCTT
CCGCACCTCAACGCGCTGTCGAGCGGCGCGGCGGCGGCGGCGGCACGCGT
GCAGGACGCGCGCGGCGGCGGCGGCGGCGGCGGCGGCGTTGCGGCGCACA
GCCGCGCGCTTCAGCACTACCTGCAGCAGCAGCCGCCGGCGGCCGGCGGC
ACCAAGGGGGCGGCGGTGCTTCCGCGGCTGGCGGCGGACTTCAGCCTCAC
GGAGGCGGACGCGCTGATCGCCAGCGCGGTGGGCGACACGTGCCTTCCGT
GCGCGCCGTTTGAAGCGCACACGCTGCTGCCAAGCTACGTGCGCAACGGC
GCGTCGCCCAGCGCGCTGGGGCACTACGCGCTGCGCGCGGCGGCGGCGGC
GGCGGCGCGCCCGTACGCGCCGCTGGCGCTGGCGCACGGCTACGTGGACG
TGGCGCGCGGCGAGCACGCGAACGCGTGCGGCGAGCTGCCGCTGCCGCTG
GCGGCGGCGCACGGCGACGCTGCGTTGCAGTGGCGCAGCGCGCCGCGCGC
GGCCAACAAATGGACGTGTAACAGCTGTTCGTACCAGTTTGCTTACAAGG
ACCACCTCGCCAGACACCGCGCGTTCGTGCACGAGGGAAAGAGCGAGAGC
AAATGCAGCCATTGCTCCAAGATCTACGTGGAGTTTAAAAGCCTTCGCCG
ACACATCAACGTAAGTTTTGTTGTTTATATATCCAATGGATAATAATATT
ATCTCTACACGCCGTACTTTGTATTAACAGCCGATTTGTTTGATGCGTTT
CCTGCGATCACTTGCAAAAAAAAAAAAAAACGGGCAGCAAAACCATATGA
GCATTTCGGCATCGCAGTGCTCCTTCTTCTGCTATTGGTGCTCGTTCCGA
TGCACGCAGCTGCGCATGTGGAGAAGTCATATCCTGACGGCGCACTACGG
CGAGAGCTATGCTCACCGCATTAGCTGGGACACATGGACAAGTTTGGTTG
ACTCGGAACAAGCAAACACAGCAGAGTAA back to topCoding sequence (CDS) from alignment at tig00000016_pilon:53261..54389- >Ggra10191.t1 ID=Ggra10191.t1|Name=Ggra10191.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1002bp|location=Sequence derived from alignment at tig00000016_pilon:53261..54389- (Gracilaria gracilis GNS1m male)
ATGCAGCCTGCTTCCCCAGCGCGCTCTCCCTCGCTGCCGCCAAAGCAACA
GCCGATGCGGTTGCAACCGCGCGCGCCGCCCTCCACGCCGCCGCACCACG
TCTCGCCGCCGCCGCCGCCGCCGCCGCCACCGCCGCCGCTGTCGCCGCTT
CCGCACCTCAACGCGCTGTCGAGCGGCGCGGCGGCGGCGGCGGCACGCGT
GCAGGACGCGCGCGGCGGCGGCGGCGGCGGCGGCGGCGTTGCGGCGCACA
GCCGCGCGCTTCAGCACTACCTGCAGCAGCAGCCGCCGGCGGCCGGCGGC
ACCAAGGGGGCGGCGGTGCTTCCGCGGCTGGCGGCGGACTTCAGCCTCAC
GGAGGCGGACGCGCTGATCGCCAGCGCGGTGGGCGACACGTGCCTTCCGT
GCGCGCCGTTTGAAGCGCACACGCTGCTGCCAAGCTACGTGCGCAACGGC
GCGTCGCCCAGCGCGCTGGGGCACTACGCGCTGCGCGCGGCGGCGGCGGC
GGCGGCGCGCCCGTACGCGCCGCTGGCGCTGGCGCACGGCTACGTGGACG
TGGCGCGCGGCGAGCACGCGAACGCGTGCGGCGAGCTGCCGCTGCCGCTG
GCGGCGGCGCACGGCGACGCTGCGTTGCAGTGGCGCAGCGCGCCGCGCGC
GGCCAACAAATGGACGTGTAACAGCTGTTCGTACCAGTTTGCTTACAAGG
ACCACCTCGCCAGACACCGCGCGTTCGTGCACGAGGGAAAGAGCGAGAGC
AAATGCAGCCATTGCTCCAAGATCTACGTGGAGTTTAAAAGCCTTCGCCG
ACACATCAACCAAAACCATATGAGCATTTCGGCATCGCAGTGCTCCTTCT
TCTGCTATTGGTGCTCGTTCCGATGCACGCAGCTGCGCATGTGGAGAAGT
CATATCCTGACGGCGCACTACGGCGAGAGCTATGCTCACCGCATTAGCTG
GGACACATGGACAAGTTTGGTTGACTCGGAACAAGCAAACACAGCAGAGT
AA back to top
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