Ggra3625.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3625.t1
Unique NameGgra3625.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length241
Homology
BLAST of Ggra3625.t1 vs. uniprot
Match: A0A2V3IK22 (Phosphoribosylanthranilate isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK22_9FLOR)

HSP 1 Score: 306 bits (783), Expect = 1.030e-102
Identity = 149/221 (67.42%), Postives = 176/221 (79.64%), Query Frame = 0
Query:   19 LQAVKVCAVVSPEDAEMIVSAAKQVLPAHVDLMIGMILWPHSRRSVDKSTAKQISAVASRSGAQPIAVFVDETVADMSETCRQIGVDVAQLHGPNCRSHWSNDTDDTNLKWIDVRDVSTDGAVSTQTLSSRGRPLWSIFDAKGGGTGKAFDWKQFTPPENPWLLAGGLDPQNVEEAVRTLRPSGVDVATGVTCPDKCRKDEERLYEFLTTLVRSYSEDVVI 239
            L+AVKVC VVSP+DA MIV AAK+VLPA+VDLMIGM+LWP SRRSV+  TA +IS VA R+  +P+A+FVDETV  M E C++I V   QLHGP CRS W++ T +T L WIDVRDVS +G VS  T S+RG  LWSIFD KGGGTG  FDWK+FTPPE+ WLLAGGL PQNV+EA+ TLRPSGVDVATGVT  DKC+KDE RLY+FL  +V SYS DV++
Sbjct:    4 LKAVKVCGVVSPDDARMIVRAAKEVLPANVDLMIGMVLWPKSRRSVNPQTAFEISRVAKRADVRPVALFVDETVKQMDEICKKIDVSTCQLHGPGCRSDWTDSTTETKLDWIDVRDVSPNGTVSAPTHSTRGAALWSIFDTKGGGTGIPFDWKRFTPPEHSWLLAGGLYPQNVKEAISTLRPSGVDVATGVTGEDKCKKDEHRLYDFLRNVVESYSSDVLL 224          
BLAST of Ggra3625.t1 vs. uniprot
Match: R7Q9C6 (Phosphoribosylanthranilate isomerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9C6_CHOCR)

HSP 1 Score: 214 bits (545), Expect = 2.630e-66
Identity = 105/219 (47.95%), Postives = 152/219 (69.41%), Query Frame = 0
Query:   19 LQAVKVCAVVSPEDAEMIVSAAKQVLPAHVDLMIGMILWPHSRRSVDKSTAKQISAVASRSGAQPIAVFVDETVADMSETCRQIGVDVAQLHGPNCRS--HWSNDTDDTNLKWIDVRDVSTDG-AVSTQTLSSRGRPLWSIFDAKGGGTGKAFDWKQFTPPENPWLLAGGLDPQNVEEAVRTLRPSGVDVATGVTCPDKCRKDEERLYEFLTTLVRSYS 234
            LQ +KVC VVSPEDA ++ +  + +LP +VDL+IG ILWP S+RSV  +TA +I+ VA  +GA P+AVFVDE++ +M   C+  G  ++QLHG  CR+    +  T +  LK+IDV+D+++DG A+  + +       W ++DAKGGGTGK F+W  F  P+  WLLAGGLDP N+ +A+  LRP+GVDVA+GV   D+C+KDE++L  F+  LV +Y+
Sbjct:   30 LQTLKVCGVVSPEDASLVTAVTRSLLPPNVDLLIGSILWPGSKRSVSHATAAKIADVARAAGATPVAVFVDESIEEMRHVCKTCGFQISQLHGGPCRASVRSAGATLEEGLKFIDVKDIASDGRALEEEDIEGA---FWRLYDAKGGGTGKPFNWSGFNRPQERWLLAGGLDPGNITQAITALRPNGVDVASGVAGEDRCKKDEKKLRLFVERLVEAYA 245          
BLAST of Ggra3625.t1 vs. uniprot
Match: A0A7S0ZEI9 (Phosphoribosylanthranilate isomerase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEI9_9RHOD)

HSP 1 Score: 186 bits (471), Expect = 1.350e-54
Identity = 101/225 (44.89%), Postives = 141/225 (62.67%), Query Frame = 0
Query:   19 LQAVKVCAVVSPEDAEMIVSAAKQVLPAHVDLMIGMILWPHSRRSVDKSTAKQISAVASRSGAQPIAVFVDETVADMSETCRQIGVDVAQLHGPNCRSHWSNDTDDTNLKWIDVRDVSTDGAVSTQTLSSRGRPL-WSIFDAKGGGTGKAFDWKQFTPPE-------NPWLLAGGLDPQNVEEAVRTLRPSGVDVATGVTCPDKCRKDEERLYEFLTTLVRSYSE 235
            LQ +KVC +   EDA+++V  A+ +LP HV L +GMI+WP S RSV+  TAK+I +VA  SG   + VFVDE+  +M E+ ++ G+D  Q+HG   R   S      N+  IDV DV +DG+ S + +  +   + W++FDAKGGGTG AFDW  F  P        N W+LAGGL+P N+ +AVR+LRP  +DVA+GV   D+ RKD  R+  FL   V +YS+
Sbjct:   64 LQLIKVCGISCGEDAKIVVDKARDILPLHVKLYLGMIIWPKSVRSVNHETAKEIVSVARDSGVSSVGVFVDESADEMYESYKEYGIDFVQMHGVKSRRARSA-LAAMNVPLIDVVDVYSDGSYSCKGVEEQESDVEWTLFDAKGGGTGTAFDWNSFKNPASVNAAYTNRWMLAGGLNPDNIADAVRSLRPPALDVASGVADKDRVRKDPARVELFLKRAVDAYSQ 287          
BLAST of Ggra3625.t1 vs. uniprot
Match: A0A5J4YJA9 (Phosphoribosylanthranilate isomerase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJA9_PORPP)

HSP 1 Score: 162 bits (409), Expect = 7.060e-46
Identity = 99/233 (42.49%), Postives = 134/233 (57.51%), Query Frame = 0
Query:   19 LQAVKVCAVVSPEDAEMIVSAAKQ--------VLPAHVDLMIGMILWPHSRRSV-DKSTAKQISAVASRSGAQPIAVFVDETVADMSETCRQIGVDVAQLHGPNCRSHWSNDTDDT-------NLKWIDVRDVSTDGAVSTQTLSSRGRPLWSIFDAKGGGTGKAFDWKQFTPPENP--WLLAGGLDPQNVEEAVRTLRPSGVDVATGVTCPDKCRKDEERLYEFLTTLVRSY 233
            L+ +KVC VVS EDA + +  A +        V  A  +++IGMILWPHS RSV  K+ A+ I+  A   GA P+ VFVDE+   + +     G+D  QLHG   R+  +  T D        NL  I V DV   G  S +  S++ +  W ++DAKGGGTG +FDW +F  P +   W+LAGGL P+NV EA+  LRP G+DVA+GV   D+CRKDE RL  F   +  +Y
Sbjct:    7 LRRLKVCGVVSAEDAALSLDVAARCFGSLRGGVRGAPDEMLIGMILWPHSIRSVKSKTDARAIADAARDRGATPVGVFVDESFEQVEQWVAWTGIDTIQLHGAGVRA--AMQTADAVAGSTALNLNMIHVVDVDAQG--SAERSSTKQKHEWCLYDAKGGGTGTSFDWSRFRAPPSDVNWMLAGGLTPENVAEAICMLRPPGLDVASGVANQDRCRKDETRLQRFYENVRAAY 235          
BLAST of Ggra3625.t1 vs. uniprot
Match: I0Z779 (Phosphoribosylanthranilate isomerase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z779_COCSC)

HSP 1 Score: 148 bits (374), Expect = 7.770e-41
Identity = 87/221 (39.37%), Postives = 125/221 (56.56%), Query Frame = 0
Query:   22 VKVCAVVSPEDAEMIVSAAKQVLPAHVDLMIGMILWPHSRRSVDKSTAKQISAVASRSGAQPIAVFVDETVADMSETCRQIGVDVAQLHGPNCRSHWSNDTDDTNLKWIDVRDVSTDGAVST----QTLSSRGRPL-----WSIFDAKGGGTGKAFDWKQFTPP----ENPWLLAGGLDPQNVEEAVRTLRPSGVDVATGVTCPDKCRKDEERLYEFLTTL 229
            +K+C V S EDAE+  +A            IGMI+WP ++RSV  + A+ I+AVA   GAQ + VFVDE    +   CR+ G+ VAQLHG   R   ++  +   L+ I V    +DG + T    +  +S G+ L     W + D   GG+G+ FDW    PP    +  W LAGGL P NV  AV+ L P+GVDV++GVT PDK RKD  +++ F++++
Sbjct:    2 IKICGVTSAEDAELAAAAGAN--------FIGMIMWPKAKRSVAPAVAQAIAAVAREHGAQAVGVFVDEDARTIEHRCREAGIGVAQLHGDVAREAVASLPE--FLQIIYVLHADSDGVIQTLQPGELAASLGQDLSRSVEWVLVDGIVGGSGEKFDWANLQPPKQVAQRGWFLAGGLGPHNVANAVQQLHPNGVDVSSGVTGPDKLRKDAAKIHAFVSSV 212          
BLAST of Ggra3625.t1 vs. uniprot
Match: D8RJ80 (Phosphoribosylanthranilate isomerase n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RJ80_SELML)

HSP 1 Score: 149 bits (376), Expect = 1.370e-40
Identity = 81/215 (37.67%), Postives = 123/215 (57.21%), Query Frame = 0
Query:   22 VKVCAVVSPEDAEMIVSAAKQVLPAHVDLMIGMILWPHSRRSVDKSTAKQISAVASRSGAQPIAVFVDETVADMSETCRQIGVDVAQLHGPNCRSHWSN-DTDDTNLKWIDVRDVSTDGAVSTQTLSSRGRPLWSIFDAKGGGTGKAFDWKQFTPP------ENPWLLAGGLDPQNVEEAVRTLRPSGVDVATGVTCPDKCRKDEERLYEFLTTL 229
            VK+C + +P DA    +A            IGMILWP S+RSV  S A++I+A A   GA P+ VFVDE    ++++CR+ G+D AQLHG   R+      +  ++L+ I V     DG++ T    +     W++ D+  GG+G++FDW+  + P      +  W LAGGL P+NV  A+  LRPSGVDV++G+  PD   KD +R+  F++ +
Sbjct:   48 VKMCGITTPGDASRAAAAGAS--------YIGMILWPRSKRSVSISLAREIAAAAREQGAVPVGVFVDEDAHTIADSCREAGLDCAQLHGSGARAALDGLASSSSSLRVIYVAHADKDGSIQTPQPVAGAPVEWTLIDSIQGGSGESFDWESLSRPGLGFVGKRGWFLAGGLKPENVGRAISLLRPSGVDVSSGIAGPDGIAKDLDRIASFVSAV 254          
BLAST of Ggra3625.t1 vs. uniprot
Match: E1ZG83 (Phosphoribosylanthranilate isomerase (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZG83_CHLVA)

HSP 1 Score: 142 bits (359), Expect = 8.500e-39
Identity = 81/205 (39.51%), Postives = 113/205 (55.12%), Query Frame = 0
Query:   22 VKVCAVVSPEDAEMIVSAAKQVLPAHVDLMIGMILWPHSRRSVDKSTAKQISAVASRSGAQPIAVFVDETVADMSETCRQIGVDVAQLHGPNCRSHWSNDTDDTNLKWIDVRDVSTDGAVSTQTLSSRGRPLWSIFDAKGGGTGKAFDWKQF--TPPE------NPWLLAGGLDPQNVEEAVRTLRPSGVDVATGVTCPDKCRKD 218
            +KVC V + EDA     A           ++GMILWP ++RS+  +TA+Q++A A   GA+P+AVFVDE  A ++  C +  V +AQLHG   R+            W+   D +  G V +    S G P W I D+  GG+G+AFDW+Q     P+      + WLLAGGL P  V EA+ T  P+GVDV++GV  PD  +KD
Sbjct:    4 IKVCGVTNAEDAAAAAEAGAN--------LVGMILWPRAKRSIPATTARQVAAAARGGGAEPVAVFVDEDAATIARVCEECEVRIAQLHGDGARAALEGLPPGLAAIWVLHADKA--GRVQSALPPSPGTPRWLIVDSLQGGSGEAFDWRQLRAAAPDLAQHSSHGWLLAGGLTPDTVAEAIATAAPTGVDVSSGVCSPDGLKKD 198          
BLAST of Ggra3625.t1 vs. uniprot
Match: A0A2P6VLL0 (Phosphoribosylanthranilate isomerase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VLL0_9CHLO)

HSP 1 Score: 144 bits (363), Expect = 2.700e-38
Identity = 90/237 (37.97%), Postives = 128/237 (54.01%), Query Frame = 0
Query:   11 PFPSPTPALQ----AVKVCAVVSPEDAEMIVSAAKQVLPAHVDLMIGMILWPHSRRSVDKSTAKQISAVASRSGAQPIAVFVDETVADMSETCRQIGVDVAQLHGPNCRSHWSNDTDDTNLKWIDVRDVSTDGAVSTQTLSSRGR-PLWSIFDAKGGGTGKAFDWKQF--------TPPENPWLLAGGLDPQNVEEAVRTLRPSGVDVATGVTCPDKCRKDEERLYEFLTTLVRSYS 234
            P  +P  ALQ     VKVC V++ EDA   V+A           +IGMILWP ++RSV  +TA  I+A A   GA+P+ VFVDE  A ++  C + GV VAQLHG   R+  +    D  + W+   D +  G V +    +  R P W I D   GG+G+AFDW+Q             + WLLAGGL P+ V EA+ T  P+GVDV++GV  PD  +KD  ++  + +    +++
Sbjct:   68 PLVAPALALQPGQPVVKVCGVINAEDAAAAVAAGAN--------LIGMILWPRAKRSVGGATAAAIAAAARAGGAEPVGVFVDEDAATIARVCAEAGVRVAQLHGEGARAALAQLPPDLAVVWVLHADKT--GVVQSPLPPAGCRQPHWLIVDGLQGGSGEAFDWQQLRRQAAGFAASSTHGWLLAGGLTPETVAEAIATATPTGVDVSSGVCGPDGLKKDLGKVQRYCSAAAAAFA 294          
BLAST of Ggra3625.t1 vs. uniprot
Match: A0A7N0TGY3 (Phosphoribosylanthranilate isomerase n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TGY3_KALFE)

HSP 1 Score: 142 bits (359), Expect = 5.310e-38
Identity = 84/215 (39.07%), Postives = 122/215 (56.74%), Query Frame = 0
Query:   22 VKVCAVVSPEDAEMIVSAAKQVLPAHVDLMIGMILWPHSRRSVDKSTAKQISAVASRSGAQPIAVFVDETVADMSETCRQIGVDVAQLHGPNCRSHWSNDTDDTNLKWIDVRDVSTDGAVSTQTLSSRGRPL--WSIFDAKGGGTGKAFDWKQFTPP----ENPWLLAGGLDPQNVEEAVRTLRPSGVDVATGVTCPDKCRKDEERLYEFLTTLV 230
            VK+C + S  DA M   A            IGMILWP+S+RSV  + AK+IS VA   GA P+ VFVD+    +        +++ QLHG   R+       ++ +  I V   + DG +  Q +SS   PL  W + D+  GG+GK F+W QF  P    ++ WLLAGG+DP+NV +A+ TLRP+GVDV++G+  PD  RKD +R+  F+  ++
Sbjct:   68 VKMCGITSARDAAMAAEAGAD--------FIGMILWPNSKRSVSLTVAKEISKVAKEYGANPVGVFVDDDAETILRAYAASDIELVQLHGGPSRAVLPVLAQESPV--IYVLHANEDGQLLNQ-ISSEEAPLVDWILVDSAKGGSGKGFNWAQFKLPPIGSKHGWLLAGGIDPENVSQAIATLRPTGVDVSSGICGPDGLRKDPQRISSFMNAVL 271          
BLAST of Ggra3625.t1 vs. uniprot
Match: A0A0K9RGE3 (Phosphoribosylanthranilate isomerase n=4 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RGE3_SPIOL)

HSP 1 Score: 141 bits (355), Expect = 1.940e-37
Identity = 80/214 (37.38%), Postives = 118/214 (55.14%), Query Frame = 0
Query:   22 VKVCAVVSPEDAEMIVSAAKQVLPAHVDLMIGMILWPHSRRSVDKSTAKQISAVASRSGAQPIAVFVDETVADMSETCRQIGVDVAQLHGPNCRSHWSNDTDDTNLKWIDVRDVSTDGAVSTQTLSSRGRPL--WSIFDAKGGGTGKAFDWKQFTPP----ENPWLLAGGLDPQNVEEAVRTLRPSGVDVATGVTCPDKCRKDEERLYEFLTTL 229
            VK+C + S  DA +   A            IGMI+WP S+RSV  STAK+IS VA + GA+P+ VFVD+    + E      ++  QLHG   RS +     +  + ++   D      V    +S     L  W + D+  GG+G+ FDWKQF  P    ++ WLLAGG+ P+NV+EA+ TLRP+G+DV++G+   D  +KDE R+  F+  +
Sbjct:   63 VKMCGITSARDAAIAAEAGAD--------FIGMIIWPKSKRSVSLSTAKEISEVARKYGAEPVGVFVDDDADTILEAAATSNIEYIQLHGNGSRSSFPQLVKENRVIYVLHTDKH---GVLLNNISQEDCALVDWILVDSATGGSGEGFDWKQFKLPSINSKHGWLLAGGIKPENVQEALLTLRPNGIDVSSGICASDGVQKDESRILSFMNAV 265          
The following BLAST results are available for this feature:
BLAST of Ggra3625.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IK221.030e-10267.42Phosphoribosylanthranilate isomerase n=1 Tax=Graci... [more]
R7Q9C62.630e-6647.95Phosphoribosylanthranilate isomerase n=1 Tax=Chond... [more]
A0A7S0ZEI91.350e-5444.89Phosphoribosylanthranilate isomerase n=1 Tax=Timsp... [more]
A0A5J4YJA97.060e-4642.49Phosphoribosylanthranilate isomerase n=1 Tax=Porph... [more]
I0Z7797.770e-4139.37Phosphoribosylanthranilate isomerase (Fragment) n=... [more]
D8RJ801.370e-4037.67Phosphoribosylanthranilate isomerase n=3 Tax=Selag... [more]
E1ZG838.500e-3939.51Phosphoribosylanthranilate isomerase (Fragment) n=... [more]
A0A2P6VLL02.700e-3837.97Phosphoribosylanthranilate isomerase n=1 Tax=Micra... [more]
A0A7N0TGY35.310e-3839.07Phosphoribosylanthranilate isomerase n=1 Tax=Kalan... [more]
A0A0K9RGE31.940e-3737.38Phosphoribosylanthranilate isomerase n=4 Tax=Spina... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 20..232
e-value: 8.4E-45
score: 155.0
IPR001240N-(5'phosphoribosyl) anthranilate isomerase (PRAI) domainPFAMPF00697PRAIcoord: 23..224
e-value: 1.2E-26
score: 93.7
IPR001240N-(5'phosphoribosyl) anthranilate isomerase (PRAI) domainHAMAPMF_00135PRAIcoord: 20..232
score: 22.638557
IPR001240N-(5'phosphoribosyl) anthranilate isomerase (PRAI) domainCDDcd00405PRAIcoord: 22..226
e-value: 3.73904E-51
score: 163.514
IPR044643N-(5'-phosphoribosyl)anthranilate isomerase familyPANTHERPTHR42894N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASEcoord: 20..228
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..240
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
IPR011060Ribulose-phosphate binding barrelSUPERFAMILY51366Ribulose-phoshate binding barrelcoord: 22..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:338466..339188 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3625.t1Ggra3625.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 338466..339188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3625.t1 ID=Ggra3625.t1|Name=Ggra3625.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=241bp
MKMPCLSFAAPFPSPTPALQAVKVCAVVSPEDAEMIVSAAKQVLPAHVDL
MIGMILWPHSRRSVDKSTAKQISAVASRSGAQPIAVFVDETVADMSETCR
QIGVDVAQLHGPNCRSHWSNDTDDTNLKWIDVRDVSTDGAVSTQTLSSRG
RPLWSIFDAKGGGTGKAFDWKQFTPPENPWLLAGGLDPQNVEEAVRTLRP
SGVDVATGVTCPDKCRKDEERLYEFLTTLVRSYSEDVVIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR001240PRAI_dom
IPR044643TrpF_fam
IPR011060RibuloseP-bd_barrel