Ggra10266.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10266.t1
Unique NameGgra10266.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length520
Homology
BLAST of Ggra10266.t1 vs. uniprot
Match: A0A2V3IEX7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEX7_9FLOR)

HSP 1 Score: 521 bits (1342), Expect = 1.140e-178
Identity = 299/532 (56.20%), Postives = 372/532 (69.92%), Query Frame = 0
Query:    1 MANPIVSDLPFTERIDMREKALAWISRDTGLQEFLVPDELTSKWSADQKKVWTTTVIDRFMSAK-HQAGREARARVFARENAGWLRRACVRLQQDLSDHRDLTRMAVLLETLWNEVSATLSDSRWAECYIMFDSALISLRVAYVWLYDKLENEDADLQSRKNVFETVVNSFFNAQAPTDDKADKHSANFRALQRVWRTEFESYTKADDLEAKLKRLEESQNLMKVATAVSKFLNAVDVDSSWMWEMQRLQEDIKAGNVKRRQTPKKRREPAPEPPEPESSGSYEPRAADSDFDIHIAEKVASN--EDXXXXXXXXSDELMRGSMSQRKDNGTTVRRSMRVAKAKVDRYRPTHGERKGRQKRAAARRAALRFSESPTPSLSDDVPIAHRGRPQRGRRTGRVPARIYEGRDVDPNDDVANIRRIVKLPARSNTRRAMPRSGISRGRVLKD------GRRRTT-LRSTTNVVKDDEDEDGLGDYGSLGTALGLGNDDM------HGDFGSPTIGGSIPGAPVSLPDRRTRLAALL 516
            MANPIV+DLPF+ERI++REK LAWISRD G+QEFL+PDELT++WS  +K +WTTTVIDRF+ AK +  G+ AR+RV ARENAGW+RR CV +QQDL+DHR LTR AVLLE LWNEVSA+LSD +WAEC IMFDSALISLRVAYVWLYDK+ENEDADL+SRK  F TVV+SFF   APTDD+ DKHS+NFR LQRVWRTEF+ YT +DD  AKL+RL+E+ NL+KVA AV +F++A++VD SWMWEM++L +D+KAG VKR++  +                S+EP AADSDFDI IAEKVA++   D        SD+LMRGSMSQR++NGT VRRSMRVA+AK  R+RP+  + +GR KRAAA+RAALRFS SP+PS SD+        P R R     P   YE  +  P    +  RR  +   R+  RR M R+GISR RV K+      GRRRT+ L +  N  +  EDE    DY      + +  D+M      HG      +    P AP+S P+RR+RLAA+L
Sbjct:    1 MANPIVTDLPFSERIELREKVLAWISRDVGIQEFLIPDELTTEWSEAEKSLWTTTVIDRFIRAKTNPFGKAARSRVLARENAGWVRRGCVAMQQDLADHRLLTRTAVLLEALWNEVSASLSDLQWAECSIMFDSALISLRVAYVWLYDKIENEDADLESRKQTFTTVVDSFFGGIAPTDDRTDKHSSNFRDLQRVWRTEFDKYTTSDDFGAKLERLQETHNLIKVAAAVGRFMSAINVDPSWMWEMKQLDDDVKAGYVKRKRKQRXXXXXXXXXXXXXXXESFEPHAADSDFDIEIAEKVAASPDNDIDEDMSASSDDLMRGSMSQRRNNGTEVRRSMRVAQAKAHRFRPSREDFRGRHKRAAAKRAALRFSHSPSPSGSDE--------PLRVRAMKHNPKGSYEDDEEKPTGKTSADRRTPRYEPRTARRRGMGRTGISRSRVTKEKRTGPKGRRRTSRLLAKANDRERFEDE-AADDYAD---DVAVDPDEMVQGLAAHGS----NVTKVAPEAPISFPNRRSRLAAML 516          
BLAST of Ggra10266.t1 vs. uniprot
Match: R7QPN4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPN4_CHOCR)

HSP 1 Score: 219 bits (558), Expect = 4.150e-62
Identity = 121/319 (37.93%), Postives = 186/319 (58.31%), Query Frame = 0
Query:    1 MANPIVSDLPFTERIDMREKALAWISRDTGLQEFLVPDELTSKWSADQKKVWTTTVIDRFMSAKHQAGR-EARARVFARENAGWLRRACVRLQQDLSDHRDLTRMAVLLETLWNEVSATLSDSR-WAECYIMFDSALISLRVAYVWLYDKLE--NEDADLQSRKNVFETVVNSFFNAQAPTDDKADKHSANFRALQRVWRTEFESYTK--ADDLEAKLKRLEESQNLMKVATAVSKFLNAVDVDSSWMWEMQRLQEDIKAGNVKR-RQTPKKRREPAPEPPEPE---------SSGSYEPRAADSDFDIHIAEKVASNE 303
            M + + S+LPF E + +RE  LAWISRD GL+EFL+PD+L+SKW+ +QK+ WT  V++++M      G    R R+ A E A  LRR CV L++  + HRD+ + A +LETLW+ +S T+ D   W +C + FD+ALIS+R+AY+W+Y   E   +    ++RK VF+  V SFF    P D   DKHS NF+ L   WR E +SY +   ++ E ++K++EE  +     T + KF+   D++ SWM  +Q++ ++I+AG  K+  +  +K +  A E  E +         S  S+E    D DF I   +  + NE
Sbjct:    1 MPSSVPSELPFGELMTLRENVLAWISRDAGLEEFLIPDKLSSKWTKEQKETWTAAVVEKYMHLDDSEGSVNMRKRIVASETASALRRCCVLLREGTASHRDVIKTAAVLETLWDSISPTMGDDAVWVKCSLTFDTALISIRLAYLWIYLNAEANGKSTSFETRKAVFKECVESFFVIGGPADSGKDKHSVNFKELVETWREELKSYAENEEEEFELRVKQVEEGYSREATVTRIEKFMGLADMNGSWMLHVQQMDKEIEAGMWKKGARRGRKAKAKAVETREDDAVNGLEDIMSVSSFEAAGVDRDFKIESEDSGSENE 319          
The following BLAST results are available for this feature:
BLAST of Ggra10266.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IEX71.140e-17856.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPN44.150e-6237.93Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 295..315
NoneNo IPR availableCOILSCoilCoilcoord: 205..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..301

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:294383..295942 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10266.t1Ggra10266.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 294383..295942 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10266.t1 ID=Ggra10266.t1|Name=Ggra10266.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=520bp
MANPIVSDLPFTERIDMREKALAWISRDTGLQEFLVPDELTSKWSADQKK
VWTTTVIDRFMSAKHQAGREARARVFARENAGWLRRACVRLQQDLSDHRD
LTRMAVLLETLWNEVSATLSDSRWAECYIMFDSALISLRVAYVWLYDKLE
NEDADLQSRKNVFETVVNSFFNAQAPTDDKADKHSANFRALQRVWRTEFE
SYTKADDLEAKLKRLEESQNLMKVATAVSKFLNAVDVDSSWMWEMQRLQE
DIKAGNVKRRQTPKKRREPAPEPPEPESSGSYEPRAADSDFDIHIAEKVA
SNEDEEEESEEESDELMRGSMSQRKDNGTTVRRSMRVAKAKVDRYRPTHG
ERKGRQKRAAARRAALRFSESPTPSLSDDVPIAHRGRPQRGRRTGRVPAR
IYEGRDVDPNDDVANIRRIVKLPARSNTRRAMPRSGISRGRVLKDGRRRT
TLRSTTNVVKDDEDEDGLGDYGSLGTALGLGNDDMHGDFGSPTIGGSIPG
APVSLPDRRTRLAALLEPS*
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