Ggra1517.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1517.t1
Unique NameGgra1517.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length307
Homology
BLAST of Ggra1517.t1 vs. uniprot
Match: R7QN10 (tRNA pseudouridine synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN10_CHOCR)

HSP 1 Score: 367 bits (942), Expect = 4.880e-124
Identity = 178/289 (61.59%), Postives = 220/289 (76.12%), Query Frame = 0
Query:   17 KRFRARVAYDGTRYKGWQFQYECRSIQGELEKAIQRRVGELVRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVRVNPIRTIWSADVVHEGEDMYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFESRDRRITPKSAPAHGLCLEQVFYDDWD 305
            +R RARVAYDGT Y+GWQ+Q +  ++QG LE A++R+ G  +RVVGASRTD+GVHARGQ MHFDIP   A R+ +  +KF +TLNQ+LP DVR+  L +AP V    +P  K      +  +  RPWH+IY + GKLYTYR S +   DP+ RLYRYHEWRA KFGFSE++LREA+ KFVGSHDFSAFTN+++PPPG  PPV  NPIR I SA V+ EG  MYRIEF INGA+YRMIRNIMGTIL+VSCG ++IS +D  F S+DRR+ PKSAPA GLCLE+V YD+W+
Sbjct:   54 QRIRARVAYDGTLYRGWQYQTDQPTVQGALEDALRRKFGHTIRVVGASRTDTGVHARGQAMHFDIPIARALRDGESERKFHYTLNQMLPPDVRVPVLSVAPTV----VPC-KVTDECGNVGIATRPWHAIYNAKGKLYTYRISTSPVFDPLGRLYRYHEWRATKFGFSEELLREASAKFVGSHDFSAFTNSTNPPPGFVPPVLSNPIRHIHSATVIPEGAGMYRIEFVINGAMYRMIRNIMGTILSVSCGSMDISNIDHLFASKDRRLVPKSAPAKGLCLEKVIYDEWE 337          
BLAST of Ggra1517.t1 vs. uniprot
Match: A0A2V3J0L1 (tRNA pseudouridine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0L1_9FLOR)

HSP 1 Score: 323 bits (828), Expect = 1.400e-108
Identity = 158/209 (75.60%), Postives = 180/209 (86.12%), Query Frame = 0
Query:   11 SQKCPTKRFRARVAYDGTRYKGWQFQYECRSIQGELEKAIQRRVGELVRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVR 219
            S+K  TKRFRARVAYDGT +KGWQFQ E RSIQGE+EKAI+R++   VRVVGASRTDSGVHARGQ +HFD+PE+ A+RE  +MQKF+FTLNQ+LPNDV LT LE+AP V H AIPMFKQAS  T ++ KLRPWHSI+CSTGKLYTYRFSIA  LDPM RLYRYHEWRA++FGFSE  LREAT++F+GSHDFSAFTNAS PPPGITP  R
Sbjct:   10 SKKHDTKRFRARVAYDGTNFKGWQFQQEERSIQGEIEKAIERKLCTRVRVVGASRTDSGVHARGQSIHFDVPEQKAAREMCNMQKFEFTLNQLLPNDVILTKLELAPHVIHTAIPMFKQASLKTIQEPKLRPWHSIFCSTGKLYTYRFSIATNLDPMDRLYRYHEWRASRFGFSEQRLREATERFLGSHDFSAFTNASHPPPGITPHYR 218          
BLAST of Ggra1517.t1 vs. uniprot
Match: A0A5J4YW71 (tRNA pseudouridine synthase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YW71_PORPP)

HSP 1 Score: 233 bits (594), Expect = 4.880e-71
Identity = 124/306 (40.52%), Postives = 187/306 (61.11%), Query Frame = 0
Query:    7 TNSRSQKCPTKRFRARVAYDGTRYKGWQFQYECR-SIQGELEKAIQRRVGELVRVVGASRTDSGVHARGQGMHFDIPEELASREAKD-----MQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVRVNPIRTIWSADVVHEGED--MYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFESRDRRITPKSAPAHGLCLEQVFYDDW 304
            T +R  +  T R R  VAYDGT ++GWQ+Q   R S+Q  LEK   RR+    RVVGASRTD+GVHARGQ  HFDIPEE+   + +      + + +F +N++LP ++++  +E+AP  +   +P  +          +L+PWHSIYC+  K+Y+Y+   A  +DP++RLYR+HE++A       D+   A ++FVG+HDFS+F N  S        V  NP+RT+ S  V+ +  D  +  +E  + GALY+M+RN++G  L V+   +    +D    +RDRRI PK+APA GLCL+++FY D+
Sbjct:   86 TEARVLRGETYRCRMTVAYDGTEFRGWQYQINTRNSVQATLEKVFSRRLNGFTRVVGASRTDTGVHARGQVAHFDIPEEIPKEDLQQDDSSGLSRLEFQVNRMLPANLQVLRMEVAPPPSLVKLPSGE----------RLKPWHSIYCAQHKIYSYKIMFATCMDPLERLYRHHEYQAC----DTDLFEAALQRFVGTHDFSSFANRLS-----HGEVVRNPVRTVHSVRVIRDERDPRLMTVEVDLQGALYKMVRNMIGAALHVARHDMPPEHIDVLLGARDRRIAPKAAPARGLCLDRIFYADY 372          
BLAST of Ggra1517.t1 vs. uniprot
Match: M2WXR7 (tRNA pseudouridine synthase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WXR7_GALSU)

HSP 1 Score: 231 bits (589), Expect = 7.860e-71
Identity = 120/287 (41.81%), Postives = 178/287 (62.02%), Query Frame = 0
Query:   18 RFRARVAYDGTRYKGWQFQYECRSIQGELEKAIQRRVGELVRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVRVNPIRTIWSADVVHEGEDMYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFESRDRRITPKSAPAHGLCLEQVFYDDW 304
            R+R RVAYDGT + GWQFQ + RS+QG LE+ + +R+   +R++GA RTDSGVHARGQ  HFD           D    ++TLN++L  D+R+  L+    +               S D +   WH+I+ +  K+Y+YRFSIAK LDP++R +R+H +R        + L +ATK F+G+HDF++F + ++        +  N  RTI+  D+VHE  D YR+E+ +NGALYRMIRNI  ++  V+  +L +  +++   ++DRR  PK+APAHGLCLE+V YDD+
Sbjct:   73 RYRLRVAYDGTDFSGWQFQEKRRSVQGVLEQVLSKRLNRSIRIIGAGRTDSGVHARGQVAHFDTVS------FSDCPHLEYTLNRMLSGDIRVYDLQQKEPI---------------SSDPR-NNWHAIFSARKKVYSYRFSIAKELDPLERRFRFHFYRRCNL----ERLYDATKVFLGTHDFTSFCSRNTE----MKEMEKNMCRTIYRIDLVHESGDSYRLEYELNGALYRMIRNITSSLFFVASDELTLDDLNEILHAKDRRRAPKAAPAHGLCLERVIYDDY 329          
BLAST of Ggra1517.t1 vs. uniprot
Match: A0A8J2SCD1 (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCD1_9STRA)

HSP 1 Score: 202 bits (513), Expect = 4.270e-60
Identity = 123/293 (41.98%), Postives = 171/293 (58.36%), Query Frame = 0
Query:   18 RFRARVAYDGTRYKGWQFQYECRSIQGELEKAIQRRV-GELVRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKY--LDPMQRLYRYHE-WRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVRVNPIRTIWSADVVHEGEDMYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFESRD-RRITP-KSAPAHGLCLEQVFYDDW 304
            R+  RVAYDGT + GWQ Q   R+++GEL KA   R  G  V ++GASRTDSGVHARGQ  H D+PEE+A     D+   +  LN++LP+DVR+ C+  AP                       +PWH+I CSTGK Y+YR + A+Y   DP++RLYR H  +    F     +L  A ++  G  DF AF N ++P      P+ ++ IR I S +   EG   Y ++  ++GALYRM+RN++G  +A   G+L++  +D+    R  RR  P KSAPA GLCLE+VFYDD+
Sbjct:   17 RYALRVAYDGTHFNGWQHQPNARTVEGELRKAFTTRFDGANVPLLGASRTDSGVHARGQAAHVDLPEEVA-----DVDLLKHQLNRMLPDDVRINCVREAPPGGE-------------------KPWHAIACSTGKRYSYRMT-ARYGSQDPLERLYRAHVCYEDLDFA----LLSNALQRCRGRFDFKAFAN-NAPTQN---PLEMDTIREIRSIEAEDEGFGDYTVQIELDGALYRMVRNVVGACVACGTGKLKLDELDELLSGRKTRRDNPTKSAPARGLCLEEVFYDDF 276          
BLAST of Ggra1517.t1 vs. uniprot
Match: M1VG01 (tRNA pseudouridine synthase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VG01_CYAM1)

HSP 1 Score: 202 bits (515), Expect = 1.210e-58
Identity = 128/303 (42.24%), Postives = 185/303 (61.06%), Query Frame = 0
Query:   18 RFRARVAYDGTRYKGWQFQYECRS---IQGELEKAIQRRVGEL---VRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAK-FGFSEDMLREATKKFVGSHDFSAFTNASSPP-PGITPPVRVNPIRTIWSADVVHEGED----MYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFE--SRDRR-ITP--KSAPAHGLCLEQVFYDD 303
            R+RA VAYDGT + G+Q Q + R+   IQG LE A+Q+R+G      +VVGA RTD+GVHARGQ +HFDIPE+ A+  A +  + +  LN++LP  +++  +E++P      +P        ++R  +L PWH+IY + GK Y YR S   ++DP+   Y Y ++R  + +  ++ ML+     FVG+HDF AF  ASSPP       ++ + +RTI    V     D    +++ EF ++GALYRMIRNIMGT LAV+ G+L+ + V    +  SR R  I P  K APAHGLCLE+V+Y D
Sbjct:   99 RYRAVVAYDGTDFHGFQRQAKSRATPTIQGRLEAALQQRLGGYPWHCQVVGAGRTDAGVHARGQVIHFDIPEQKAATSAFEPSRLEHALNRLLPRTIQVRAMEVSPPPAWYLVP--------STRTYQLLPWHAIYRAQGKRYVYRLSAGAWIDPLYHRYAYTDYRQMQHWAVAQQMLQT----FVGTHDFGAF--ASSPPGKADRHQIQRSTVRTIRRISVEPSPVDSIVPVWKFEFELDGALYRMIRNIMGTFLAVARGELDDALVVDALQQGSRGRALIAPRVKPAPAHGLCLERVYYAD 387          
BLAST of Ggra1517.t1 vs. uniprot
Match: D7FS62 (tRNA pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS62_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 5.960e-56
Identity = 111/293 (37.88%), Postives = 172/293 (58.70%), Query Frame = 0
Query:   18 RFRARVAYDGTRYKGWQFQ-YECRSIQGELEKAIQRRVGELVRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVRV---NPIRTIWSADVVHEGEDMYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFESR--DRRITPKSAPAHGLCLEQVFYDDW 304
            RF +RV YDGT YKG+Q Q +   ++QG LEKA+  R    V VV A RTD+GVH+ GQ +HFD+P        +D+ +  +++NQ++P DVR+  + +AP  +   +              K  PW S+  + GK Y+YR  +   + P+ RLYR H  +AA    + D+L +   K VG HDF+ F+N  +    +     +   N +RT++SA+++ EG    R++F ++GALYRM+RN++G +LAV+ G+LE   +D+ F +R  D R+   +APAHGL L+ V YD +
Sbjct:  138 RFVSRVMYDGTNYKGFQLQGHGLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLPNA-----NEDLSQLAYSMNQMMPEDVRVWNMSVAPPSSPWQVE-------------KGWPWSSMLNARGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTIPKLVGKHDFAGFSNEVTKRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEIFATRVRDSRLI-YAAPAHGLTLDTVLYDGY 411          
BLAST of Ggra1517.t1 vs. uniprot
Match: A0A7J7INL2 (tRNA pseudouridine synthase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7INL2_9RHOD)

HSP 1 Score: 194 bits (493), Expect = 1.240e-55
Identity = 129/314 (41.08%), Postives = 179/314 (57.01%), Query Frame = 0
Query:    7 TNSRSQKCPTKRFRARVAYDGTRYKGWQFQYECRS---IQGELEKAIQRRVGEL---VRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVRV--NPIRTIWSADVVHEGED----MYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFES--RDRRITP---KSAPAHGLCLEQVFYDD 303
            T +R+Q     R+RA VAYDGT + G+Q Q   R+   IQ +LE  +QRR+G      +VVGA RTD+GVHARGQ +HFDIPE +A   A +  + Q  +NQ+LP  +++  LE+AP+      P       I  ++ K+ PWH+IY + GKLY YR    ++ DP+ + Y Y E R+       + L +A   FVG+HDF AF ++   PP      RV  + +RTI    +V   E     +++  F ++GALYRMIRN++G  LAV+ G LE   V K  E   R R +     K APA GLCLEQV+Y D
Sbjct:   63 TLTRAQHTELVRYRAVVAYDGTDFHGFQRQSNSRAYPTIQSQLELVLQRRLGCCQWRCQVVGAGRTDAGVHARGQVVHFDIPESMAESVAFEPLQLQHAMNQLLPRTIQIRALEVAPL------PQLCLIRHI--QEYKILPWHAIYHARGKLYVYRMFAGQWRDPLHQRYVYSEHRSLPRWTDAESLLQA---FVGTHDFGAFAHS---PPNKADRQRVLHSTVRTIRRIVLVPRDEGGIVPVWQFHFELDGALYRMIRNLIGAFLAVAKGDLEPELVLKALEQGLRGRALIAARVKPAPAQGLCLEQVYYAD 362          
BLAST of Ggra1517.t1 vs. uniprot
Match: A0A7S0NAW7 (tRNA pseudouridine synthase (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0NAW7_9EUKA)

HSP 1 Score: 190 bits (482), Expect = 2.550e-55
Identity = 117/296 (39.53%), Postives = 160/296 (54.05%), Query Frame = 0
Query:   19 FRARVAYDGTRYKGWQFQYECRSIQGELEKAIQRRVGELVRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTLNQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAK---YLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSP-----PPGITPPVRVNPIRTIWSADVVHEGEDMYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKFFESRDRRITPKSAPAHGLCLEQVFYD-DWD 305
            FRAR+ YDG  Y G QFQ    SI  EL+ A+ +R  + VRV+ A RTD+GVHARGQ +HFD+  +   R + D + FQ  +N +LP DVRL  LE A                   RD + R WHS+Y +TGKLY+YRF        +DP QRLYR+ E R        D ++ A   FVG HDF++F N  +      P G+  P  ++ +R + S  +  EG+   R +  + GALY+ +RN++G +  V  G+ E + V      R R   PK APA GL LE V+Y+  WD
Sbjct:    1 FRARLMYDGLAYAGLQFQENAPSIANELQVALAKRTQQDVRVIAAGRTDTGVHARGQAIHFDVDGD---RFSDDPEAFQTAVNCMLPQDVRLVQLERAQ-----------------ERDAEGRRWHSMYWATGKLYSYRFHSGHPIGCMDPTQRLYRHQERRGP---LCLDRMQAAADYFVGEHDFASFANKGATGVRQSPAGVRLP-SLSTVRRVRSITIHDEGDGYARADVHLKGALYKQVRNMVGLLFEVGDGRREATDVPDLMALRSRTGLPKPAPALGLTLESVYYNVGWD 272          
BLAST of Ggra1517.t1 vs. uniprot
Match: A0A7S4MSL3 (tRNA pseudouridine synthase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSL3_9STRA)

HSP 1 Score: 187 bits (475), Expect = 3.120e-53
Identity = 122/302 (40.40%), Postives = 172/302 (56.95%), Query Frame = 0
Query:   18 RFRARVAYDGTRYKGWQFQYECRSIQGELEKAIQRRVGELVRVVGASRTDSGVHARGQGMHFDI-PEELASREAK--DMQKFQFTLNQILPNDVRL--TCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCSTGKLYTYRFSIAKYLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHDFSAFTNASSPPPGITPPVRVNPIRTIWSADVVHEGEDMYRIEFRINGALYRMIRNIMGTILAVSCGQLEISTVDKF------------FESRDRRITPKSAPAHGLCLEQVFYD 302
            R+RARVAYDGT + GWQ Q + R+IQG++E  + RR    VR+VGA RTD+GVHARGQ  HFD+  +E+   ++K  D+Q  Q +LN +L  D+R+  TC    P         +K    I  R+ K   WH IY +  KLY+YR S A YLDP+ R  R H +         ++LR A + F G+HDF AF  A       +  V +  IRT+++ ++V EG   YR++F + GALY+M+RN+MGT LAV+ G+LE   + +F            F  +D +  P  A   GL LE V++D
Sbjct:   90 RYRARVAYDGTGFNGWQTQAKGRTIQGDIEAVLSRRFDRPVRIVGAGRTDAGVHARGQAFHFDLRADEIGVADSKCFDLQ-LQRSLNSMLRRDIRVWNTCQAPPPS-------SYKNWEGI-ERNHK---WHVIYNAEKKLYSYRISTAPYLDPLLRHTRTHVFDPTNI----ELLRTALQHFEGTHDFRAFAGAIDANERKSGKV-LGTIRTVYAVNLVEEGNGNYRVDFLLKGALYKMVRNMMGTALAVAQGRLEEDRLLEFLHHDSSEGKVLQFVRKDNKCKP--AAPEGLTLEHVYFD 372          
The following BLAST results are available for this feature:
BLAST of Ggra1517.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QN104.880e-12461.59tRNA pseudouridine synthase n=1 Tax=Chondrus crisp... [more]
A0A2V3J0L11.400e-10875.60tRNA pseudouridine synthase n=1 Tax=Gracilariopsis... [more]
A0A5J4YW714.880e-7140.52tRNA pseudouridine synthase n=1 Tax=Porphyridium p... [more]
M2WXR77.860e-7141.81tRNA pseudouridine synthase n=1 Tax=Galdieria sulp... [more]
A0A8J2SCD14.270e-6041.98Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
M1VG011.210e-5842.24tRNA pseudouridine synthase n=1 Tax=Cyanidioschyzo... [more]
D7FS625.960e-5637.88tRNA pseudouridine synthase n=2 Tax=Ectocarpus Tax... [more]
A0A7J7INL21.240e-5541.08tRNA pseudouridine synthase n=1 Tax=Cyanidiococcus... [more]
A0A7S0NAW72.550e-5539.53tRNA pseudouridine synthase (Fragment) n=1 Tax=Pha... [more]
A0A7S4MSL33.120e-5340.40tRNA pseudouridine synthase n=1 Tax=Odontella auri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020094Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminalGENE3D3.30.70.580coord: 14..123
e-value: 1.4E-24
score: 88.4
IPR001406Pseudouridine synthase I, TruAPIRSFPIRSF001430PSU-Acoord: 16..124
e-value: 1.8E-23
score: 81.1
coord: 126..305
e-value: 1.3E-24
score: 84.8
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 14..302
IPR001406Pseudouridine synthase I, TruAHAMAPMF_00171TruAcoord: 17..301
score: 28.301151
IPR001406Pseudouridine synthase I, TruACDDcd02570PseudoU_synth_EcTruAcoord: 21..301
e-value: 3.43874E-77
score: 233.52
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 191..302
e-value: 8.1E-20
score: 71.3
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3D3.30.70.660coord: 151..299
e-value: 5.1E-31
score: 109.3
NoneNo IPR availablePANTHERPTHR11142:SF0TRNA PSEUDOURIDINE SYNTHASE-LIKE 1coord: 14..302
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 16..304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:299397..300317 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1517.t1Ggra1517.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 299397..300317 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1517.t1 ID=Ggra1517.t1|Name=Ggra1517.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=307bp
MSSTTGTNSRSQKCPTKRFRARVAYDGTRYKGWQFQYECRSIQGELEKAI
QRRVGELVRVVGASRTDSGVHARGQGMHFDIPEELASREAKDMQKFQFTL
NQILPNDVRLTCLEMAPMVTHNAIPMFKQASAITSRDVKLRPWHSIYCST
GKLYTYRFSIAKYLDPMQRLYRYHEWRAAKFGFSEDMLREATKKFVGSHD
FSAFTNASSPPPGITPPVRVNPIRTIWSADVVHEGEDMYRIEFRINGALY
RMIRNIMGTILAVSCGQLEISTVDKFFESRDRRITPKSAPAHGLCLEQVF
YDDWDI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020094TruA/RsuA/RluB/E/F_N
IPR001406PsdUridine_synth_TruA
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR020095PsdUridine_synth_TruA_C
IPR020103PsdUridine_synth_cat_dom_sf