Ggra10245.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10245.t1
Unique NameGgra10245.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length79
Homology
BLAST of Ggra10245.t1 vs. uniprot
Match: A0A2V3IFY9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFY9_9FLOR)

HSP 1 Score: 132 bits (331), Expect = 9.170e-39
Identity = 59/78 (75.64%), Postives = 63/78 (80.77%), Query Frame = 0
Query:    1 MAGGNAKYPVPGEPYGGFKPAAPARWHSRLGYAFGVTMWLWVFYRAKNDLPHMLGLEKPWDHHHHAAAHDEQHGEATH 78
            M G   +YPVPGEPYGGFKP  P RW SRLGYAFGVTMWLWVFYRAKNDLPHMLG EKPW+HHH   +HDE   +ATH
Sbjct:    1 MGGETPRYPVPGEPYGGFKPIPPPRWQSRLGYAFGVTMWLWVFYRAKNDLPHMLGFEKPWEHHH--GSHDEHESDATH 76          
BLAST of Ggra10245.t1 vs. uniprot
Match: A0A1X6NLL5 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLL5_PORUM)

HSP 1 Score: 90.5 bits (223), Expect = 2.570e-22
Identity = 42/74 (56.76%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    1 MAGGNAKY-PVPGEPYGGFKPAAPARWHSRLGYAFGVTMWLWVFYRAKNDLPHMLGLEKPWDHHHHAAAHDEQH 73
            MAG    Y P    P+GG+ P A  +W +R G A G  MWLW+FYRAKNDLPHMLG EKPWDHH H   H+  H
Sbjct:    1 MAGPPPPYAPGGSRPFGGWAPPAVPKWQTRTGTAMGAVMWLWIFYRAKNDLPHMLGWEKPWDHHAHGGDHEGGH 74          
BLAST of Ggra10245.t1 vs. uniprot
Match: A0A7S2KLZ2 (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KLZ2_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 2.240e-13
Identity = 31/62 (50.00%), Postives = 39/62 (62.90%), Query Frame = 0
Query:   16 GGFKPAAPARWHSRLGYAFGVTMWLWVFYRAKNDLPHMLGLEKPWDH----HHHAAAHDEQH 73
            G   P   + WH++ G A G  MW+W+FYRAK DLP +LGL  PWDH     HH AAH++ H
Sbjct:   30 GSHPPFTVSEWHTKGGEAIGFVMWMWIFYRAKQDLPVVLGLRHPWDHVEGDDHHDAAHEDAH 91          
BLAST of Ggra10245.t1 vs. uniprot
Match: A0A167GNA3 (Uncharacterized protein n=2 Tax=Calocera TaxID=29888 RepID=A0A167GNA3_CALVF)

HSP 1 Score: 65.5 bits (158), Expect = 1.870e-12
Identity = 32/64 (50.00%), Postives = 39/64 (60.94%), Query Frame = 0
Query:   11 PGEPYGGFKPAAPARWHSRLGYAFGVTMWLWVFYRAKNDLPHMLGLEKPWDHHHHAAAHDEQHG 74
            PG  Y GF P  P+R+H  L  A G +MW +VFYRA+ D P +LG   PW+ HH A  HDE  G
Sbjct:    6 PGTSYAGFHPHPPSRFHVYLAKALGASMWFFVFYRARQDGPRVLGWRHPWEGHH-ADGHDEHGG 68          
BLAST of Ggra10245.t1 vs. uniprot
Match: A0A061H0S6 (Uncharacterized protein n=3 Tax=Ustilaginomycotina TaxID=452284 RepID=A0A061H0S6_9BASI)

HSP 1 Score: 65.1 bits (157), Expect = 2.590e-12
Identity = 33/73 (45.21%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    6 AKYPVPGEPYGGFKPAAPARWHSRLGYAFGVTMWLWVFYRAKNDLPHMLGLEKPWDHHHHAAAHDEQHGEATH 78
            +K+  P   +   +PA   RW ++L    G TMW W+FYRAK D P +LGL  PWD HH    HDE HG++ H
Sbjct:    3 SKFYTPAYNFHPHQPAFKHRWGAKL---LGATMWFWIFYRAKQDGPVLLGLRHPWDGHH--GHHDEAHGDSHH 70          
BLAST of Ggra10245.t1 vs. uniprot
Match: M9M208 (Uncharacterized protein n=2 Tax=Pseudozyma antarctica TaxID=84753 RepID=M9M208_PSEA3)

HSP 1 Score: 64.3 bits (155), Expect = 4.640e-11
Identity = 33/65 (50.77%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   13 EPYGGFKPAAPA---RWHSRLGYAFGVTMWLWVFYRAKNDLPHMLGLEKPWD-HHHHAAAHDEQH 73
            +P  GF P  PA   RW ++L    G TMW W+FYRAK D P +LGL+ PWD H HH   HD+ H
Sbjct:  104 KPMPGFAPHPPAFKHRWGAKL---LGATMWFWIFYRAKQDGPVLLGLKHPWDGHDHHHGDHDDSH 165          
BLAST of Ggra10245.t1 vs. uniprot
Match: A0A317XZ98 (Uncharacterized protein n=1 Tax=Testicularia cyperi TaxID=1882483 RepID=A0A317XZ98_9BASI)

HSP 1 Score: 62.0 bits (149), Expect = 4.820e-11
Identity = 30/56 (53.57%), Postives = 36/56 (64.29%), Query Frame = 0
Query:   13 EPYGGFKPAAPA---RWHSRLGYAFGVTMWLWVFYRAKNDLPHMLGLEKPWDHHHH 65
            +P  GF P  PA   RW ++L    G TMW W+FYRAK D P +LGL+ PWD HHH
Sbjct:   14 KPMYGFHPHQPAFRHRWGAKL---LGATMWFWIFYRAKQDGPVLLGLKHPWDGHHH 66          
BLAST of Ggra10245.t1 vs. uniprot
Match: W3VR80 (Uncharacterized protein n=1 Tax=Pseudozyma aphidis (strain ATCC 32657 / CBS 517.83 / DSM 70725 / JCM 10318 / NBRC 10182 / NRRL Y-7954 / St-0401) TaxID=1391700 RepID=W3VR80_PSEA5)

HSP 1 Score: 63.9 bits (154), Expect = 2.610e-10
Identity = 33/65 (50.77%), Postives = 39/65 (60.00%), Query Frame = 0
Query:   13 EPYGGFKPAAPA---RWHSRLGYAFGVTMWLWVFYRAKNDLPHMLGLEKPWD-HHHHAAAHDEQH 73
             P  GF P  PA   RW ++L    G TMW W+FYRAK D P +LGL+ PWD H HH   HD+ H
Sbjct:  214 RPMPGFAPHPPAFKHRWGAKL---LGATMWFWIFYRAKQDGPVLLGLKHPWDGHDHHHGDHDDSH 275          
BLAST of Ggra10245.t1 vs. uniprot
Match: A0A066VMN7 (Uncharacterized protein n=1 Tax=Tilletiaria anomala (strain ATCC 24038 / CBS 436.72 / UBC 951) TaxID=1037660 RepID=A0A066VMN7_TILAU)

HSP 1 Score: 59.3 bits (142), Expect = 6.300e-10
Identity = 35/82 (42.68%), Postives = 42/82 (51.22%), Query Frame = 0
Query:    1 MAGGNAKYPVPGEPYG---GFKPAAPARWHSRLGYAFGVTMWLWVFYRAKNDLPHMLGLEKPWDHHHHAAAHDEQ-HGEATH 78
            MAGG++        Y    GF P  P+  H       G TMW W+FYRA+ D P +LGL  PWD HH    HD+  HGE  H
Sbjct:    1 MAGGSSSTGSSSRWYAPKFGFHPHQPSLKHRAGATILGATMWFWIFYRARQDGPVLLGLRHPWDGHH--GHHDDHAHGEGHH 80          
BLAST of Ggra10245.t1 vs. uniprot
Match: A0A067N253 (Uncharacterized protein n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067N253_9AGAM)

HSP 1 Score: 57.8 bits (138), Expect = 1.690e-9
Identity = 30/66 (45.45%), Postives = 35/66 (53.03%), Query Frame = 0
Query:   13 EPYGGFKPAAPARWHSRLGYAFGVTMWLWVFYRAKNDLPHMLGLEKPWDHHHHAAAHDEQHGEATH 78
             P  GF P  P   H  L  A G TMW ++FYRA+ D P +LGL  PW+ H H       HGEA H
Sbjct:    3 SPGAGFHPHPPTFQHRFLAKALGATMWFFIFYRARQDGPKLLGLRHPWEGHGHG-----DHGEAHH 63          
The following BLAST results are available for this feature:
BLAST of Ggra10245.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFY99.170e-3975.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NLL52.570e-2256.76Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S2KLZ22.240e-1350.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A167GNA31.870e-1250.00Uncharacterized protein n=2 Tax=Calocera TaxID=298... [more]
A0A061H0S62.590e-1245.21Uncharacterized protein n=3 Tax=Ustilaginomycotina... [more]
M9M2084.640e-1150.77Uncharacterized protein n=2 Tax=Pseudozyma antarct... [more]
A0A317XZ984.820e-1153.57Uncharacterized protein n=1 Tax=Testicularia cyper... [more]
W3VR802.610e-1050.77Uncharacterized protein n=1 Tax=Pseudozyma aphidis... [more]
A0A066VMN76.300e-1042.68Uncharacterized protein n=1 Tax=Tilletiaria anomal... [more]
A0A067N2531.690e-945.45Uncharacterized protein n=1 Tax=Botryobasidium bot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044980NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, plant/fungiPANTHERPTHR36987NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 2-LIKEcoord: 5..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..44
NoneNo IPR availableTMHMMTMhelixcoord: 26..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:192667..192974 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10245.t1Ggra10245.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 192667..192974 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10245.t1 ID=Ggra10245.t1|Name=Ggra10245.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=79bp
MAGGNAKYPVPGEPYGGFKPAAPARWHSRLGYAFGVTMWLWVFYRAKNDL
PHMLGLEKPWDHHHHAAAHDEQHGEATH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR044980NDUFB2_plant/fungi