Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10305.t2.stop1 | Ggra10305.t2.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000016_pilon 644222..644224 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10305.t2.start1 | Ggra10305.t2.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000016_pilon 645746..645748 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10305.t2 ID=Ggra10305.t2|Name=Ggra10305.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=509bp
MFSFLSLNPLRLLRRDKLRTPAEQPPSPPPQQQEQQWQAKLDALQAQLDA
ANTARSDAVQQLTQLTQEHTATDAQFSALELSHATTVSDLSSLKHSHAAT
VAELSSLNQTHATTVAELSSLNDAHSATVAELASLTHTHATTASELTSLS
TQLRQQTAAADQLRADNMKLNELVKELRAHHAALQKSLTASESALAAEQQ
AHQQAQAALADKRAAHDELATALSEEQAAHAAATQLLEEQRAANDAVSTE
LATEKQAVADAAAALEAEKDAHDGTKAALATEQADKQAADDALSKESAAL
ADANAALQEKGQLVESLSGDKAQLQAALQEKEQQLDAVSTEKASLEATVV
ERDAALMAGQAAHKDASEKAEATQRGLSADKDALHSNVQQLEQRTAALDK
QVAELSVALRDVELERDAVRQDREELREELRLARTELEDWMREMKGDVEP
SPDVAAADTPDVAVADTPDGVDGGGADAAAGMNGGVSADGDHDVPQAAEE
GASEGAAA* back to topspliced messenger RNA >Ggra10305.t2 ID=Ggra10305.t2|Name=Ggra10305.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1527bp|location=Sequence derived from alignment at tig00000016_pilon:644222..645748- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGTTCTCGTTCCTGAGCCTGAACCCGCTGCGCCTGCTGCGTCGCGACAA
GCTGCGCACGCCGGCAGAGCAGCCGCCGTCGCCGCCGCCGCAGCAGCAGG
AACAGCAGTGGCAGGCGAAGCTGGACGCGTTGCAGGCGCAGTTGGATGCG
GCCAACACCGCACGTAGCGACGCTGTGCAGCAGCTGACGCAGCTCACGCA
GGAGCATACAGCCACTGACGCGCAGTTTTCTGCGCTCGAGCTCTCTCACG
CCACTACCGTTTCGGACTTGTCCTCTCTCAAGCACTCTCACGCTGCCACC
GTTGCGGAGCTCTCCTCTCTCAACCAAACTCACGCTACTACTGTCGCCGA
GCTCTCCTCCCTCAACGACGCCCACTCCGCCACTGTCGCCGAGCTTGCGT
CGCTAACCCACACGCACGCTACCACCGCCTCCGAGCTCACGTCGCTCTCC
ACGCAGCTGCGCCAACAAACCGCCGCCGCCGACCAGCTCCGCGCCGACAA
CATGAAGCTCAACGAGCTCGTCAAGGAGCTGCGCGCGCACCACGCCGCGT
TACAAAAGAGCCTCACCGCCAGCGAGTCCGCGCTGGCCGCCGAGCAGCAA
GCGCACCAGCAGGCACAGGCCGCGCTGGCGGACAAGCGCGCCGCGCACGA
CGAGCTGGCGACCGCGCTCAGCGAAGAGCAGGCCGCGCACGCCGCCGCCA
CGCAGCTGCTGGAGGAGCAGCGCGCCGCCAACGACGCCGTGAGCACGGAG
CTCGCCACGGAGAAGCAGGCCGTGGCCGACGCAGCCGCCGCGCTGGAGGC
CGAGAAGGACGCGCATGACGGCACCAAGGCCGCGCTGGCCACGGAACAAG
CCGACAAGCAGGCCGCCGACGACGCGCTGAGCAAGGAGAGCGCGGCGCTG
GCCGACGCCAACGCGGCGCTGCAGGAGAAGGGCCAGCTGGTAGAGTCGCT
GAGCGGCGACAAGGCGCAGCTACAGGCGGCGCTGCAGGAGAAGGAGCAGC
AGCTGGACGCCGTGAGCACGGAGAAGGCGTCGCTGGAAGCGACGGTGGTG
GAGCGCGACGCGGCGCTGATGGCCGGCCAGGCGGCGCACAAGGACGCCAG
TGAGAAGGCGGAGGCCACGCAGAGGGGGCTGAGCGCGGACAAGGACGCGC
TGCACTCAAACGTGCAGCAGCTGGAGCAGCGCACGGCCGCGCTGGACAAG
CAGGTGGCCGAGCTCAGCGTCGCGCTCAGGGACGTGGAGCTGGAGAGGGA
CGCCGTGAGGCAGGACCGGGAGGAGCTGCGCGAGGAGCTGCGCCTCGCGC
GCACCGAACTGGAAGACTGGATGCGCGAGATGAAGGGCGACGTCGAGCCC
TCCCCGGACGTTGCTGCCGCTGATACGCCGGACGTTGCTGTCGCTGATAC
GCCGGACGGCGTGGACGGCGGCGGCGCGGATGCTGCCGCTGGCATGAACG
GCGGCGTGTCGGCGGACGGCGACCACGACGTGCCGCAGGCGGCGGAGGAG
GGCGCCTCGGAGGGCGCTGCGGCGTGA back to topprotein sequence of Ggra10305.t2 >Ggra10305.t2 ID=Ggra10305.t2|Name=Ggra10305.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=509bp
MFSFLSLNPLRLLRRDKLRTPAEQPPSPPPQQQEQQWQAKLDALQAQLDA
ANTARSDAVQQLTQLTQEHTATDAQFSALELSHATTVSDLSSLKHSHAAT
VAELSSLNQTHATTVAELSSLNDAHSATVAELASLTHTHATTASELTSLS
TQLRQQTAAADQLRADNMKLNELVKELRAHHAALQKSLTASESALAAEQQ
AHQQAQAALADKRAAHDELATALSEEQAAHAAATQLLEEQRAANDAVSTE
LATEKQAVADAAAALEAEKDAHDGTKAALATEQADKQAADDALSKESAAL
ADANAALQEKGQLVESLSGDKAQLQAALQEKEQQLDAVSTEKASLEATVV
ERDAALMAGQAAHKDASEKAEATQRGLSADKDALHSNVQQLEQRTAALDK
QVAELSVALRDVELERDAVRQDREELREELRLARTELEDWMREMKGDVEP
SPDVAAADTPDVAVADTPDGVDGGGADAAAGMNGGVSADGDHDVPQAAEE
GASEGAAA* back to topmRNA from alignment at tig00000016_pilon:644222..645748- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10305.t2 ID=Ggra10305.t2|Name=Ggra10305.t2|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1527bp|location=Sequence derived from alignment at tig00000016_pilon:644222..645748- (Gracilaria gracilis GNS1m male)
ATGTTCTCGTTCCTGAGCCTGAACCCGCTGCGCCTGCTGCGTCGCGACAA
GCTGCGCACGCCGGCAGAGCAGCCGCCGTCGCCGCCGCCGCAGCAGCAGG
AACAGCAGTGGCAGGCGAAGCTGGACGCGTTGCAGGCGCAGTTGGATGCG
GCCAACACCGCACGTAGCGACGCTGTGCAGCAGCTGACGCAGCTCACGCA
GGAGCATACAGCCACTGACGCGCAGTTTTCTGCGCTCGAGCTCTCTCACG
CCACTACCGTTTCGGACTTGTCCTCTCTCAAGCACTCTCACGCTGCCACC
GTTGCGGAGCTCTCCTCTCTCAACCAAACTCACGCTACTACTGTCGCCGA
GCTCTCCTCCCTCAACGACGCCCACTCCGCCACTGTCGCCGAGCTTGCGT
CGCTAACCCACACGCACGCTACCACCGCCTCCGAGCTCACGTCGCTCTCC
ACGCAGCTGCGCCAACAAACCGCCGCCGCCGACCAGCTCCGCGCCGACAA
CATGAAGCTCAACGAGCTCGTCAAGGAGCTGCGCGCGCACCACGCCGCGT
TACAAAAGAGCCTCACCGCCAGCGAGTCCGCGCTGGCCGCCGAGCAGCAA
GCGCACCAGCAGGCACAGGCCGCGCTGGCGGACAAGCGCGCCGCGCACGA
CGAGCTGGCGACCGCGCTCAGCGAAGAGCAGGCCGCGCACGCCGCCGCCA
CGCAGCTGCTGGAGGAGCAGCGCGCCGCCAACGACGCCGTGAGCACGGAG
CTCGCCACGGAGAAGCAGGCCGTGGCCGACGCAGCCGCCGCGCTGGAGGC
CGAGAAGGACGCGCATGACGGCACCAAGGCCGCGCTGGCCACGGAACAAG
CCGACAAGCAGGCCGCCGACGACGCGCTGAGCAAGGAGAGCGCGGCGCTG
GCCGACGCCAACGCGGCGCTGCAGGAGAAGGGCCAGCTGGTAGAGTCGCT
GAGCGGCGACAAGGCGCAGCTACAGGCGGCGCTGCAGGAGAAGGAGCAGC
AGCTGGACGCCGTGAGCACGGAGAAGGCGTCGCTGGAAGCGACGGTGGTG
GAGCGCGACGCGGCGCTGATGGCCGGCCAGGCGGCGCACAAGGACGCCAG
TGAGAAGGCGGAGGCCACGCAGAGGGGGCTGAGCGCGGACAAGGACGCGC
TGCACTCAAACGTGCAGCAGCTGGAGCAGCGCACGGCCGCGCTGGACAAG
CAGGTGGCCGAGCTCAGCGTCGCGCTCAGGGACGTGGAGCTGGAGAGGGA
CGCCGTGAGGCAGGACCGGGAGGAGCTGCGCGAGGAGCTGCGCCTCGCGC
GCACCGAACTGGAAGACTGGATGCGCGAGATGAAGGGCGACGTCGAGCCC
TCCCCGGACGTTGCTGCCGCTGATACGCCGGACGTTGCTGTCGCTGATAC
GCCGGACGGCGTGGACGGCGGCGGCGCGGATGCTGCCGCTGGCATGAACG
GCGGCGTGTCGGCGGACGGCGACCACGACGTGCCGCAGGCGGCGGAGGAG
GGCGCCTCGGAGGGCGCTGCGGCGTGA back to topCoding sequence (CDS) from alignment at tig00000016_pilon:644222..645748- >Ggra10305.t2 ID=Ggra10305.t2|Name=Ggra10305.t2|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1527bp|location=Sequence derived from alignment at tig00000016_pilon:644222..645748- (Gracilaria gracilis GNS1m male)
ATGTTCTCGTTCCTGAGCCTGAACCCGCTGCGCCTGCTGCGTCGCGACAA
GCTGCGCACGCCGGCAGAGCAGCCGCCGTCGCCGCCGCCGCAGCAGCAGG
AACAGCAGTGGCAGGCGAAGCTGGACGCGTTGCAGGCGCAGTTGGATGCG
GCCAACACCGCACGTAGCGACGCTGTGCAGCAGCTGACGCAGCTCACGCA
GGAGCATACAGCCACTGACGCGCAGTTTTCTGCGCTCGAGCTCTCTCACG
CCACTACCGTTTCGGACTTGTCCTCTCTCAAGCACTCTCACGCTGCCACC
GTTGCGGAGCTCTCCTCTCTCAACCAAACTCACGCTACTACTGTCGCCGA
GCTCTCCTCCCTCAACGACGCCCACTCCGCCACTGTCGCCGAGCTTGCGT
CGCTAACCCACACGCACGCTACCACCGCCTCCGAGCTCACGTCGCTCTCC
ACGCAGCTGCGCCAACAAACCGCCGCCGCCGACCAGCTCCGCGCCGACAA
CATGAAGCTCAACGAGCTCGTCAAGGAGCTGCGCGCGCACCACGCCGCGT
TACAAAAGAGCCTCACCGCCAGCGAGTCCGCGCTGGCCGCCGAGCAGCAA
GCGCACCAGCAGGCACAGGCCGCGCTGGCGGACAAGCGCGCCGCGCACGA
CGAGCTGGCGACCGCGCTCAGCGAAGAGCAGGCCGCGCACGCCGCCGCCA
CGCAGCTGCTGGAGGAGCAGCGCGCCGCCAACGACGCCGTGAGCACGGAG
CTCGCCACGGAGAAGCAGGCCGTGGCCGACGCAGCCGCCGCGCTGGAGGC
CGAGAAGGACGCGCATGACGGCACCAAGGCCGCGCTGGCCACGGAACAAG
CCGACAAGCAGGCCGCCGACGACGCGCTGAGCAAGGAGAGCGCGGCGCTG
GCCGACGCCAACGCGGCGCTGCAGGAGAAGGGCCAGCTGGTAGAGTCGCT
GAGCGGCGACAAGGCGCAGCTACAGGCGGCGCTGCAGGAGAAGGAGCAGC
AGCTGGACGCCGTGAGCACGGAGAAGGCGTCGCTGGAAGCGACGGTGGTG
GAGCGCGACGCGGCGCTGATGGCCGGCCAGGCGGCGCACAAGGACGCCAG
TGAGAAGGCGGAGGCCACGCAGAGGGGGCTGAGCGCGGACAAGGACGCGC
TGCACTCAAACGTGCAGCAGCTGGAGCAGCGCACGGCCGCGCTGGACAAG
CAGGTGGCCGAGCTCAGCGTCGCGCTCAGGGACGTGGAGCTGGAGAGGGA
CGCCGTGAGGCAGGACCGGGAGGAGCTGCGCGAGGAGCTGCGCCTCGCGC
GCACCGAACTGGAAGACTGGATGCGCGAGATGAAGGGCGACGTCGAGCCC
TCCCCGGACGTTGCTGCCGCTGATACGCCGGACGTTGCTGTCGCTGATAC
GCCGGACGGCGTGGACGGCGGCGGCGCGGATGCTGCCGCTGGCATGAACG
GCGGCGTGTCGGCGGACGGCGACCACGACGTGCCGCAGGCGGCGGAGGAG
GGCGCCTCGGAGGGCGCTGCGGCGTGA back to top
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