Ggra5559.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5559.t1
Unique NameGgra5559.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length98
Homology
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BLAST of Ggra5559.t1 vs. uniprot
Match: A0A2V3IU44 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU44_9FLOR)

HSP 1 Score: 133 bits (334), Expect = 1.140e-38
Identity = 70/92 (76.09%), Postives = 77/92 (83.70%), Query Frame = 0 
Query:    5 IRDPALRSALRRLIRAKNTAFRNDAEMLRVANQTLREQVQQHRGAAAEKRDQLLFEMEEAITFLNNNVVQAPLNERGNYVFDATSINENNAR 96
            IRDPAL SALRRLIRAKN AFRND EML+VA QTLR+Q  QHR   AEKR  LL E+E+AI+FL NNVVQAPLN+RGNYVFDAT INE+N R
Sbjct:    2 IRDPALHSALRRLIRAKNAAFRNDLEMLKVATQTLRDQAHQHRSPPAEKRQHLLSEIEQAISFLRNNVVQAPLNQRGNYVFDATRINESNLR 93
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BLAST of Ggra5559.t1 vs. uniprot
Match: A9RRT1 (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RRT1_PHYPA)

HSP 1 Score: 55.5 bits (132), Expect = 6.550e-8
Identity = 29/70 (41.43%), Postives = 45/70 (64.29%), Query Frame = 0 
Query:   15 RRLIRAKNTAFRNDAEMLRVANQTLREQVQQHRGAAA-EKRDQLLFEMEEAITFLNNNVVQAPLNERGNY 83
            R L+R +   F  D+EML  + + +R++ + HR   A E+ D+L+ +  EA+ F+  N+VQA LNERGNY
Sbjct:   13 RSLLRTRKQCFAGDSEMLAASAKQIRDEFEGHRNVGAGEELDKLVTKAREAVEFMKVNIVQAKLNERGNY 82
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BLAST of Ggra5559.t1 vs. uniprot
Match: A0A7I4EM87 (Complex1_LYR_dom domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4EM87_PHYPA)

HSP 1 Score: 55.5 bits (132), Expect = 6.850e-8
Identity = 29/70 (41.43%), Postives = 45/70 (64.29%), Query Frame = 0 
Query:   15 RRLIRAKNTAFRNDAEMLRVANQTLREQVQQHRGAAA-EKRDQLLFEMEEAITFLNNNVVQAPLNERGNY 83
            R L+R +   F  D+EML  + + +R++ + HR   A E+ D+L+ +  EA+ F+  N+VQA LNERGNY
Sbjct:   13 RSLLRTRKQCFAGDSEMLAASAKQIRDEFEGHRNVGAGEELDKLVTKAREAVEFMKVNIVQAKLNERGNY 82
The following BLAST results are available for this feature:
BLAST of Ggra5559.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IU441.140e-3876.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A9RRT16.550e-841.43Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A7I4EM876.850e-841.43Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 36..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:930890..931183 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5559.t1Ggra5559.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 930890..931183 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5559.t1 ID=Ggra5559.t1|Name=Ggra5559.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=98bp
MQTAIRDPALRSALRRLIRAKNTAFRNDAEMLRVANQTLREQVQQHRGAA
AEKRDQLLFEMEEAITFLNNNVVQAPLNERGNYVFDATSINENNARS*
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