Ggra5679.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5679.t1
Unique NameGgra5679.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1684
Homology
BLAST of Ggra5679.t1 vs. uniprot
Match: A0A2V3IX58 (Putative ATP-dependent DNA helicase CHR12 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX58_9FLOR)

HSP 1 Score: 877 bits (2267), Expect = 2.280e-283
Identity = 649/1694 (38.31%), Postives = 856/1694 (50.53%), Query Frame = 0
Query:    5 ARPSTPAPRRTLRSYARNSRPVP-IRATEAAGDPIVNSDEDINPKSPIASKMRKALNDICIPETPIKSKPNEDVHSEPFAKVPVSSAAPTPSPALTSSPERDDVEVLGPRKSDLSDASVLDVSHRVASRKNKIAEQKTTVNQPPSPR-----SSKPHAEGEKRVTRSRSKYGFRRAGSNSQDRSQAILVSDXXXXXVVATKVRPRSRRRLQRNAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXLPEDPADNLELQAILSNASDETSATKMIMEWGTKEGRAKLRKQYGSYDEDEENGTRRSKRITRSAAEQEAAGDETE---SDXXXXXXXXXXXXXXXXXXXI-STDDSDSDKPNFESPATRARRNVNGVRTRRQIASLTDKQRPLRTESKSVPLPKVAGLLQKRLKSRRKLVPQGSGKSKKLSKSTHVGQPESNDDDESHPKLRRSKRGLVKRAHSSRSIYAEDKTESDDN----RDKDFQNLDDTIKQLSDADDE---VEGEEVVEMELEEVEESVASDXXXXXXXXXXXXXXXXXXXHSEDLFEEQEEIRRPRSRKKMNGRRK-----------------------RTRPKNIFQTQGAALTAREQQERLDFLVQQSATIAKDLHVAMAAQSGKHSDEMKNANGNGQPGNIVVEKEEEVFVPPTGENCSLQPHQSEGIKWLLMLDAQGLNAILADEMGLGKTIQAISFLASLVISGSRGPHLVIAPRNVCAHWAEEVKKFYPGQISVVTHLGVADERFENLERVLREDAFDIMITSYELAARDLFSKKRREGFPS-YSGLLRAFRNVEFEYLVVDEAHRLKNDNSKINIGIRNYAKAQRRLLLTGTPLSNNLKELWSLMNVLNPQIFSSKATFETWFSAPFSSQLDKKNARVGLTAAEKSVIVDRLHTVIRPFFRRRVRADVCPTFTSADEVVIRCPMSSLQKALMLHLQQRATAKDAGLNNVVMAMR------------------------------RFAFLYYSLPRLLAGDHR-------------------------------------------------------------------------------------------------KKTVHILRLVTDRSVDDLIVEAARNKMKTQQVAVGAGKFNTSHGAALDQRMRQRDLEQLLQNLESVNYKEIDCH----KGAASTGEGGAS-SSQQGEKIDQQIYMKWSEAILRTGERSLPDVSIDPIWIDSVDGCRPSDVPRWLKSDADIWAAAKALGSPGPFAANQEYEDAVKSKALIGSYSKQGRAARARRQVINYDDFSDLESGDDEKDPDLVINDVDIVEE--ESDIEITDNGSEENEKKIEARQRSSIFQAWTQNLGNAGDAGFIEKAGSKVSTSQMPSKIATDVIEAGAATAVGNAVPVPVGSNFKGSSTHPNGVLNKPTKHAGSSLGLASSRVVHTCPISQPTTVMQKSGTKLANAYSTTLGNVPSALVPSFPFSSECKASNAWELQTNSTSKGTVPTSEGNGLVDSVKPIMPVSQIRRKGRVPKKPTSQDHAAQYVLEYRRLCASIGIPALPENPRPEHMLE-------AVTQNGKKSASGLPRPPADSSSNADGGTGLPIGLRKIAPTTSTNQVFSLLDSQSSGQTSKAEFSGLKSNPAPSQMTRASRDRPEMPTLLRRTVPLRQAG 1516
            ARPS    RRTLRSYAR SRP P I ++E A DPI+NSD++ N + P             +  +P+K       H    ++    +++P                                                               SS P     ++ +R+        A  N Q +S   +  D     ++ T  R   R+RL++NAP S                           L +   ++L+LQ IL+NA+DET    M+  WGT EGR  LRK+Y +   DE                  A  DE +   SD          XXXXXX   + + ++SD +    +S   +ARR  + V TR Q A+     + + + SKSVPLP +  +L+ +L+SR +L+ + + + +   K  H                                                RDKD++N+DD +K LSD D+E                VEESV SD                     ED  E QE + +                                   RTRPK+IF+ +G AL+AREQQ+RLDFLV QSA IA++LH AMA Q+GK   +  +AN NG    +V +++EE  V P+G+ C LQPHQ +G+KWLL LDAQGLNAILADEMGLGKTIQAISFLASLV+SGSRGPHLVIAP+NVC HW +EV+KFYP QI+ V H G A ER ENLE++L EDAFDIM+TSY+ A  DLF++KR EG  S +  +LRAFR VEFEYLVVDEAHRL NDN+K NIGIR Y +AQRRLLLTGTPLSNNL+ELWSLMNVLNPQIFSSKATFETWF+APFSS+   +  +V LT AEKSVIVDRLHTVIRPFFRRRVRADVCP+++SADEVVIRCPMSSLQ+ALM+H Q+R T KDAG+NNV+M+MR                              +F FLYY+LPRL+A DHR                                                                                                 KKTVHILRLVT++ VDDLIVE +R+K+KTQ+VAVGAGKFNTSH AALDQR+RQ+DLE LLQ LE+ N+ E+DC      GAA+ G G AS +S+Q  K +  +Y +W  A+LR GE SL DVS+DPIW+DSVDG R +DVP WLK+DAD+WAA KAL + GPF A QEY+DA KSKALIGSYSK+GRAARARRQ I++D +SD++  DDE+DPD++IN+ D+ ++  E D+ +     E  EK   +++ SS+ QAW  +  N        +A + V  SQ              AT  G       GS      T       +P K  G S  L+S        +   +++    G + + A S T      A  P +P ++  +A N      NS    + P S  N        +M  +Q+    +  ++        + VL     C++      P+N +    LE       A+T     ++  +P+P    S+    G  LPIGLRK+AP+  T    + L  Q + Q +    + + SN +  Q T    +  E+PT+L++ VP + +G
Sbjct:    4 ARPSVAPERRTLRSYARKSRPFPAIPSSELALDPILNSDDEQNTEMP------------AVQVSPVK-------HLRDISQTRSMTSSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSHPFIASRRKSSRT--------ASQNVQTQS---ISDDDSIEELIETTSRQTPRKRLRKNAPPSDDEVQEVPTSPSNKRRRTRSAAKRDGQLADRSNEDLDLQVILNNANDETEFNDMVKAWGTPEGRLMLRKKYCTDQPDEXXXXXXXXXXXXXXXNHVAREDEVQTLSSDSDSVPMPKRKXXXXXXSKLVRNEEESDDEVQELKSSGPKARRKRSAVSTRSQSAATNRATQRVTSSSKSVPLPTL-DVLRNQLRSREQLISRNTARIRNAGKKIHSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDKDYKNVDDVVKNLSDVDEEPAXXXXXXXXXXXXXXVEESVGSD---------------------EDGVEVQEILSKDEEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTRPKDIFKAEGDALSAREQQQRLDFLVHQSANIAQELHKAMAVQTGKRI-QGSDANINGDVTTLVEDRKEEELVLPSGQGCELQPHQLDGVKWLLTLDAQGLNAILADEMGLGKTIQAISFLASLVLSGSRGPHLVIAPKNVCEHWVQEVEKFYPNQITAVCHHGNARERLENLEQILEEDAFDIMVTSYDHARNDLFTRKRPEGLSSDHMRVLRAFRKVEFEYLVVDEAHRLNNDNTKTNIGIRGYTQAQRRLLLTGTPLSNNLRELWSLMNVLNPQIFSSKATFETWFAAPFSSKTSGQT-KVSLTTAEKSVIVDRLHTVIRPFFRRRVRADVCPSYSSADEVVIRCPMSSLQRALMMHFQKRTTEKDAGINNVIMSMRGVSNHPFVVSHALYDSYMSQVTPKMVASSGKFVFLYYALPRLIASDHRVLIFSQFREVLDFIEDLLELMGMKFCRLDGTTKTDDRRAGLSDFNREGSDIPVFLLTTRAGGVGLNLQTADTVILFDSDWNPSADLQAVSRIQRIGQKKTVHILRLVTEKGVDDLIVETSRHKLKTQKVAVGAGKFNTSHVAALDQRIRQKDLEDLLQRLEATNFAEVDCDDTPDNGAATDGCGSASGNSKQEGKRETAVYKRWYNALLRPGEASLADVSLDPIWVDSVDGTRAADVPAWLKNDADVWAATKALKAQGPFGAQQEYDDAAKSKALIGSYSKKGRAARARRQAISFDQYSDMDPSDDEQDPDIMINEDDLSDDVSEQDMPLVSPMLENVEKHHRSKKGSSLLQAWATSQSNLN---IDRQASTSVPISQFQ------------ATCAGKG-----GSGIALKQTQNAAYSGEPKKSPGQSTVLSSKDQRTRFSVQNVSSMAPSLGAQ-SKAPSGTR-----AQGPRYPSNTSNQAVNP----LNSHISTSRPASTHN--------LMSHAQMVALNKSAEELEKNVKETKNVLCALSFCSTARPKGRPKNSKATTRLELVKVVNEAITPQSTNASEPVPQP----STTPFLGAQLPIGLRKVAPSQGT----AALTRQIAPQYNSRTRASVISNASSVQSTEKGLNTSELPTVLKKVVPPQSSG 1597          
BLAST of Ggra5679.t1 vs. uniprot
Match: R7QT48 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT48_CHOCR)

HSP 1 Score: 662 bits (1707), Expect = 2.180e-203
Identity = 422/987 (42.76%), Postives = 550/987 (55.72%), Query Frame = 0
Query:  340 ISTDDSDSDKPNFESPATRARRNVNGVRTRRQIASLTDKQRPLRTESKSVPLPKVAGLLQKRLKSRRKLVPQGSGKSKKLSKSTHVGQPESNDDDESHPKLRRSKRGLVKRAHSSRSIYAEDKTESDDNRDKDFQNLDDTIKQLSDADDEVEGEEVVEMELEEVEESVASDXXXXXXXXXXXXXXXXXXXHSEDL----FEEQEEIRRPRSRKKMNGRRK---------RTRPKNIFQTQGAALTAREQQERLDFLVQQSATIAKDLHVAMA----------AQSGKHSDEMKNANGNGQPGNIVVEKE------EEVFVPPTGENCSLQPHQSEGIKWLLMLDAQGLNAILADEMGLGKTIQAISFLASLVISGSRGPHLVIAPRNVCAHWAEEVKKFYPGQISVVTHLGVADERFENLERVLREDAFDIMITSYELAARDLFSKKRR-EG-FPSYSGLLRAFRNVEFEYLVVDEAHRLKNDNSKINIGIRNYAKAQRRLLLTGTPLSNNLKELWSLMNVLNPQIFSSKATFETWFSAPFSSQLDKKNARVGLTAAEKSVIVDRLHTVIRPFFRRRVRADVCPTFTSADEVVIRCPMSSLQKALMLHLQQRATAKDAGLNNVVMAMR------------------------------RFAFLYYSLPRLLAGDHR-------------------------------------------------------------------------------------------------KKTVHILRLVTDRSVDDLIVEAARNKMKTQQVAVGAGKFNTSHGAALDQRMRQRDLEQLLQNLESVNYKEIDCHKGA-----ASTGEGGASSSQQGEKIDQQIYMKWSEAILRTGERSLPDVSIDPIWIDSVDGCRPSDVPRWLKSDADIWAAAKALGSPGPFAANQEYEDAVKSKALIGSYSKQGRAARARRQVINYDDFSDLES-GDDEKDP 1162
            +  D +DSD+ + E+P  R R +    R R++  S  D+        KSVPLPK  G L +RL SR   VP    + ++L+++      E+           R K G   R  + R                      D + +LSD+++++E +        EV   + SD                     +D     F ++E    P  RK+ N R+          RTRPKN F++    L+AREQ++RLDFLV+QSA IA++LH AMA           +S     + + A G+     +V E        EE F  PT E   LQPHQ++G+KWLL LDAQGLNAILADEMGLGKTIQ ++FLASLVI+G RGPHLV+AP+NVC HWA EV+ +YPGQI++VT+LG A+ER EN+   L ED FDIM+TS+E+A RDLF  KR  EG F  YS +LRAFR VEFEYLVVDEAHRLKND S++NIGIRNY  AQRRLLLTGTPLSN+LKELW LMN+LNP+IFSSKA FETWFSAPF S   + + +  +T AE+S IVDRLHT+IRPFFRRRVRADVCP+FTSADE++IRCPMS+LQKALMLH ++RA  KDA  NN++MAMR                              +FAFL+YSLPRLLAG HR                                                                                                  +TVHI+RL+T+ +VD +I+E ++ K++TQ VAVGAGKFNTS GAALDQ++RQ+DLEQL+Q L+   +  I+          A +     S     + + ++ + +WS  +LR GE  LPDV+   IW+DSV+ C   +VP+WL  DA + AA +AL     FAA Q YED V+S AL+G++SK+ RA+RARR+ +  D F DL S GD ++DP
Sbjct:  183 VHDDQNDSDRESEETPKRRGRSSAESRRLRKERPSRQDR-------GKSVPLPKSRGTLMERLSSRA-AVPSNGTEKRRLTRAAAAKMKEA---------AGREKPGTRGRRRNRR----------------------DEVTELSDSEEDIEADC-------EVANGMLSDSSNEGEEDVGAMEAEILAGEEDDQSDLDFVDEEPA--PSPRKRRNNRKTXXXXXXXXXRTRPKNAFESNVEELSAREQRQRLDFLVKQSADIARELHKAMADAANERPNGGPKSPARKGDSQAATGDTSGVEVVQESSQSAPVVEEEFAQPTAEGKKLQPHQTDGVKWLLTLDAQGLNAILADEMGLGKTIQTLAFLASLVINGKRGPHLVVAPKNVCEHWAAEVRAWYPGQINIVTYLGHAEERLENMRDYLEEDNFDIMVTSFEVALRDLFHPKRHVEGVFAPYSKVLRAFRKVEFEYLVVDEAHRLKNDKSQMNIGIRNYKCAQRRLLLTGTPLSNDLKELWCLMNILNPKIFSSKARFETWFSAPFES--GRGSRKGAMTHAEQSAIVDRLHTIIRPFFRRRVRADVCPSFTSADEILIRCPMSNLQKALMLHFRRRADDKDASKNNILMAMRGVSSHPYMSSHALYDGEQSQATPRLVSTCGKFAFLHYSLPRLLAGGHRVLIFSQFRRALDFLEDLMDLLHIKYGRLDGMTTSEDRIAGLRAFNAPGSELQVYLLSTRAGGVGINLQTADTVILFDSDWNPSADLQAVSRIQRIGQTRTVHIMRLLTENAVDSIILETSKRKLRTQAVAVGAGKFNTSSGAALDQKLRQKDLEQLIQELDIQAFLPIEADDEVTVVPTAQSSPESISPDSLEKSVREKYFKEWSRQLLRPGETELPDVAQAAIWLDSVEDCAGCEVPKWLGRDAVLVAAGRALECMNRFAAAQVYEDTVQSIALVGAFSKKDRASRARRKTVA-DTFFDLGSDGDGDEDP 1118          
BLAST of Ggra5679.t1 vs. uniprot
Match: A0A5J4Z786 (SWI/SNF chromatin-remodeling complex subunit snf22 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z786_PORPP)

HSP 1 Score: 235 bits (599), Expect = 1.800e-59
Identity = 151/410 (36.83%), Postives = 219/410 (53.41%), Query Frame = 0
Query:  570 LTAREQQERLDFLVQQSATIAKDLHVAMAAQ----------SGKHSDEMKNANGNGQPGNIVVEKEEEVFVP----PTGENCSLQP--HQSEGIKWLLMLDAQGLNAILADEMGLGKTIQAISFLASLVISGSRGPHLVIAPRNVCAHWAEEVKKFYPGQISVVTHLGVADERFENLERVL--RED-----AFDIMITSYELAARDLF-SKKRREGFPSYSGLLRAFRNVEFEYLVVDEAHRLKNDNSKINIGIRNYAKAQRRLLLTGTPLSNNLKELWSLMNVLNPQIFSSKATFETWFSAPFSSQLDKKNARVGLTAAEKSVIVDRLHTVIRPFFRRRVRADVCPTFTSADEVVIR---CPMSSLQKALMLHLQQRATAKDAGLNNVVMAMRRFAFLYYSLPRLLAGD 952
            LT+ E+ +R+  L+ Q+  I  +L   ++ Q          + + SD   NA                 F P    P G  CS+Q   HQ  G+KWLL L   G NAILAD+MGLGKTIQ ++ + +L  SG  G  L++AP +VC HW  + +KF+PG + V  H+G  D R    E VL  R D      +D+++TS+EL +RD   S +   G   +S +L+  R   F YLVVDEAHRLKN +S +   +     ++ RLLLTGTPL NNL+ELW+L+N   P IF+S  +FE WF  PF+  ++  +    ++  E+ VI++RLH V+RPF  RR +++V     +   ++ R   CP S++Q AL  H+     AK     + VM  R+ A   + L   L  D
Sbjct:  297 LTSEERADRMQALLAQTERIEGELQSLLSHQLVARASLSPSAAESSDLFTNA-----------------FAPAPNSPNGSACSVQLKFHQMVGVKWLLALHRDGRNAILADDMGLGKTIQTLALVHALKHSGKHGCTLIVAPVSVCDHWLSDAEKFFPG-LRVHAHVGSVDHRMGVWEEVLLSRNDDVGKMPYDVIVTSFELVSRDFCRSAELSVGQMQFSAVLQFLRGCRFSYLVVDEAHRLKNKDSMMFAKLSRDIASEHRLLLTGTPLQNNLQELWALLNFCVPSIFASLDSFEAWFVQPFNEAVNTSDFECSVSETERLVIIERLHRVLRPFILRRTKSEVFGNDKALAPLIERDVYCPQSNMQVALA-HIFSLQKAKKVRSASQVMRFRQAAIHPFMLSTSLYDD 687          
BLAST of Ggra5679.t1 vs. uniprot
Match: A0A086LQ53 (Putative SWI2/SNF2 Brahma-like (Fragment) n=1 Tax=Toxoplasma gondii RUB TaxID=935652 RepID=A0A086LQ53_TOXGO)

HSP 1 Score: 209 bits (531), Expect = 1.820e-54
Identity = 134/355 (37.75%), Postives = 194/355 (54.65%), Query Frame = 0
Query:  606 DEMKNANGNGQPGN-----IVVEKEEEVFVPPTGENCSLQPHQSEGIKWLLMLDAQGLNAILADEMGLGKTIQAISFLASLV-ISGSRGPHLVIAPRNVCAHWAEEVKKFYPGQISVVTHLGVADERFENLERVLREDAFDIMITSYELAARDLFSKKRREGFPSYSGLLRAFRNVEFEYLVVDEAHRLKNDNSKINIGIRNYAKAQRRLLLTGTPLSNNLKELWSLMNVLNPQIFSSKATFETWFSAPFSSQL------DKKNARVG-LTAAEKSVIVDRLHTVIRPFFRRRVRADVCPTFTSADEVVIRCPMSSLQKALMLHLQQRAT--------AKDAGLNNVVMAMRRFA 939
            D+ +N++G+   G      +  + +EEV  P T     L P+Q  G+ W+L L    L+ ILADEMGLGKTIQ I+ LA L     + GPHL+IAP +   +WA+E +++ P  + VV   G   ER E L+R LR   F++ +T+++LA R+    +    FP++             +LVVDE HR+KN  SK +I +  + +A  RLLLTGTPL NNL ELWSL+N L P+IFS  + FE WFS PF  Q       D   A    L   E+ +I++RLH V+RPF  RRV+ DV        E ++R  +S+ Q+A+   +Q++              G  N +M +R+ A
Sbjct:   81 DDAQNSSGSWALGQDQYYAMSHQVQEEVQQPSTLTGGDLMPYQMAGLSWMLSLYNNDLHGILADEMGLGKTIQTIALLAYLKEFKNNSGPHLIIAPLSTLPNWADEFRRWCPS-LKVVVLKGGRLERRE-LQRELRRGDFNVCLTTFDLAMRE----RHGLSFPNW------------RHLVVDEGHRMKNSKSKFHICVSEF-RATHRLLLTGTPLQNNLAELWSLLNFLLPKIFSCASDFEKWFSQPFEGQGMPVEGGDPDGAGTAFLNEEERLLIINRLHAVLRPFLLRRVKKDVLKDMPERKEYLVRICLSAWQQAVYKQIQEKGLRTVDQVGHVTKRGFQNTLMQLRKIA 416          
BLAST of Ggra5679.t1 vs. uniprot
Match: A0A7S1V1F3 (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V1F3_9STRA)

HSP 1 Score: 203 bits (516), Expect = 3.920e-54
Identity = 117/312 (37.50%), Postives = 173/312 (55.45%), Query Frame = 0
Query:  642 HQSEGIKWLLMLDAQGLNAILADEMGLGKTIQAISFLASLV-ISGSRGPHLVIAPRNVCAHWAEEVKKFYPGQISVVTHLGVADERFENLERVLREDAFDIMITSYELAARDLFSKKRREGFPSYSGLLRAFRNVEFEYLVVDEAHRLKNDNSKINIGIRNYAKAQRRLLLTGTPLSNNLKELWSLMNVLNPQIFSSKATFETWFSAPFSSQLDKKNARVG----LTAAEKSVIVDRLHTVIRPFFRRRVRADVCPTFTSADEVVIRCPMSSLQKALMLHLQQRATAKDA-----------GLNNVVMAMRR 937
            +Q  G++W++ L    LN ILADEMGLGKTIQAIS +  L+    + GP+LVI P +  ++W  E  K+ P    VV + G   +R +  +  +R   F++++T+YE   RD  S K+                + ++Y +VDE HR+KN  SK  + +      + R+LLTGTPL NNL ELW+L+N L P+IF+S  +F+ WF+ PFSS  +  N        L   E+ +I+ RLH ++RPF  RRV+++V        E V+RC +SS QK L   +  +A A  +           GLNNVVM +R+
Sbjct:    3 YQIAGLQWMVSLYNNKLNGILADEMGLGKTIQAISLIGYLMEFKENLGPYLVIVPLSTLSNWVNEFAKWVPSA-RVVAYKGTPAQRRDLFKDAIRNGQFNVLLTTYEYVIRDKGSLKK----------------LVWQYAIVDEGHRMKNAQSKFAVTLGTQYTTKNRILLTGTPLQNNLPELWALLNFLLPEIFNSVESFDQWFNRPFSSFKNTNNPEEQTDQMLGNEERMLIIHRLHELLRPFMLRRVKSEVLDQLPEKVEKVLRCDLSSWQKELYKQISAKAVADKSLMGTFVEQPTRGLNNVVMQLRK 297          
BLAST of Ggra5679.t1 vs. uniprot
Match: A0A453DY95 (Helicase ATP-binding domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453DY95_AEGTS)

HSP 1 Score: 206 bits (525), Expect = 6.820e-54
Identity = 145/456 (31.80%), Postives = 233/456 (51.10%), Query Frame = 0
Query:  545 RSRKKMNGRRKRTRPKNIFQTQGAALTA---REQQERLDFLVQQSATIAKDLHVAMAAQSGKHSDEMKNANGNGQPGN-------------------IVVEKEEEVFVPPTGENCSLQPHQSEGIKWLLMLDAQGLNAILADEMGLGKTIQAISFLASL-VISGSRGPHLVIAPRNVCAHWAEEVKKFYPGQISVVTHLGVADERFENLERVLREDAFDIMITSYELAARDLFSKKRREGFPSYSGLLRAFRNVEFEYLVVDEAHRLKNDNSKINIGIRNYAKAQRRLLLTGTPLSNNLKELWSLMNVLNPQIFSSKATFETWFSAPFSSQLDKKNARVGLTAAEKSVIVDRLHTVIRPFFRRRVRADVCPTFTSADEVVIRCPMSSLQKALMLHLQQR------ATAKDAGLNNVVMAMRRFA---FLYYSL---PRLLAGDHRKKTVHILRLVT 965
            R+R K   + K+ + + I QTQ AA+ A   ++ + RL +L+QQ+   A   H A  +Q+ +     K   G G+P +                   +       + V P+  N  ++ +Q  G+ WL+ L   G+N ILADEMGLGKT+Q IS +  L    G  GPH+V+AP++   +W  E+ +F P  +  V  LG  +ER    E++L+   FD+ +TS+E+A ++  + KR                  + Y+++DEAHR+KN+NS ++  +R ++    RLL+TGTPL NNL ELWSL+N L P+IFSS  TF+ WF      Q+  +N        ++  +V +LH V+RPF  RR+++DV        E++++  MS +QK     L Q+      A  +   L N+ M +R+     +L+      P    GDH  +T  +  ++T
Sbjct:   16 RARLKQLQKLKKQKIQEILQTQNAAINADMNKKGKGRLKYLLQQTEIFA---HFAEGSQTKE-----KKPRGRGRPASKRRAVEXXXXXXXXXXEDALASSVGTHLLVQPSCINGQMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEFRGITGPHMVVAPKSTLGNWMNEIARFCP-LLRAVKFLGNPEERNHIREKLLQPGKFDVCVTSFEMAIKEKNALKR----------------FSWRYIIIDEAHRIKNENSLLSKTMRLFS-TNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSADTFDEWF------QITGEN--------DQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKEIILKVGMSQMQKQYYRGLLQKDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLIETAGMFFMLT 431          
BLAST of Ggra5679.t1 vs. uniprot
Match: A0A6A4LB60 (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4LB60_9ERIC)

HSP 1 Score: 212 bits (539), Expect = 1.920e-53
Identity = 126/321 (39.25%), Postives = 186/321 (57.94%), Query Frame = 0
Query:  613 GNGQPGNIVVEKEEEVFVPP-TGENCSLQPHQSEGIKWLLMLDAQGLNAILADEMGLGKTIQAISFLASLVIS-GSRGPHLVIAPRNVCAHWAEEVKKFYPGQISVVTHLGVADERFENLERVLREDAFDIMITSYELAARDLFSKKRREGFPSYSGLLRAF-RNVEFEYLVVDEAHRLKNDNSKINIGIRNYAKAQRRLLLTGTPLSNNLKELWSLMNVLNPQIFSSKATFETWFSAPFSSQLDKKNARVGLTAAEKSVIVDRLHTVIRPFFRRRVRADVCPTFTSADEVVIRCPMSSLQKALMLHLQQRATAKDAGLNN 930
            G  Q  +++   EE+V   P T +   L+P+Q EG++W+L L    LN ILADEMGLGKTIQ I+ +A L+ + G  GPHL++AP+ V  +W  E   + PG ++V+ + G  DER    E    E  F+++IT Y+L  RD                 +AF + + ++Y++VDE HRLKN    +   + +  + +RRLLLTGTP+ N+L+ELWSL+N L P IF+S   FE WF+APF+ + D     V L   E+ +I+ RLH VIRPF  RR + +V        +V+++C MSS QK   ++ QQ       GL++
Sbjct:  400 GQRQYNSVIHSIEEKVTEQPSTLQGGELRPYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLIENKGVTGPHLIVAPKAVLPNWVNEFSSWAPGIVAVL-YDGRLDERKAMREEYSGEGKFNVLITHYDLIMRD-----------------KAFLKKIHWQYMIVDEGHRLKNHECALARTLVSGYRIRRRLLLTGTPIQNSLQELWSLLNFLLPNIFNSVENFEEWFNAPFADRCD-----VSLNDEEELLIIRRLHHVIRPFILRRKKNEVEKYLPGKTQVILKCDMSSWQK---VYYQQVTDVGRVGLDS 694          
BLAST of Ggra5679.t1 vs. uniprot
Match: A0A7C9ADA4 (Uncharacterized protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ADA4_OPUST)

HSP 1 Score: 207 bits (528), Expect = 2.060e-53
Identity = 145/421 (34.44%), Postives = 217/421 (51.54%), Query Frame = 0
Query:  542 RRPRSRKKMNGRRKRTRPKNIFQTQGAALTA---REQQERLDFLVQQSATIAKDLHVAMAAQSGKHSDEMKNANGNGQPGNIVVEKEEE---------------VFVPPTGENCSLQPHQSEGIKWLLMLDAQGLNAILADEMGLGKTIQAISFLASL-VISGSRGPHLVIAPRNVCAHWAEEVKKFYPGQISVVTHLGVADERFENLERVLREDAFDIMITSYELAARDLFSKKRREGFPSYSGLLRAFRNVEFEYLVVDEAHRLKNDNSKINIGIRNYAKAQRRLLLTGTPLSNNLKELWSLMNVLNPQIFSSKATFETWFSAPFSSQLDKKNARVGLTAAEKSVIVDRLHTVIRPFFRRRVRADVCPTFTSADEVVIRCPMSSLQKALMLHLQQR------ATAKDAGLNNVVMAMRR 937
            +R R+R K   + K+ + + +   Q AA+ A    + + RL +L+QQ+   A   H A   QS       K A G G+  + + E+EE+               +   P+     ++ +Q  G+ WL+ L   G+N ILADEMGLGKT+Q IS L  L    G  GPH+V+AP++   +W  E+K+F P  +  V  LG  +ER    E  L    FD+ +TS+E+A ++              G LR F    + Y+++DEAHR+KN+NS ++  +R Y K   RLL+TGTPL NNL ELWSL+N L P+IFSS  TF+ WF      Q+   N        ++  +V +LH V+RPF  RR+++DV        E +++  MS +QK     L Q+      A  +   L NV M +R+
Sbjct:   38 KRERARLKEMEKLKKQKIQEMLDKQNAAIDADMNNKGKGRLKYLLQQTEIFA---HFAKGDQSASQ----KKAKGRGRHASKMTEEEEDEEYLKEEEAGTANTRLVTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIKRFCP-VLRAVKFLGNPEERSHIRENQLVAGKFDVCVTSFEMAIKE-------------KGTLRRF---SWRYIIIDEAHRIKNENSLLSKTMRLY-KTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF------QISGDN--------DQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNVAMQLRK 419          
BLAST of Ggra5679.t1 vs. uniprot
Match: A0A7S0ZI34 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZI34_9RHOD)

HSP 1 Score: 217 bits (553), Expect = 2.480e-53
Identity = 133/330 (40.30%), Postives = 189/330 (57.27%), Query Frame = 0
Query:  626 EEVFVPPTGENCSLQPHQSEGIKWLLMLDAQGLNAILADEMGLGKTIQAISFLASLV-ISGSRGPHLVIAPRNVCAHWAEEVKKFYPGQISVVTHLGVADERFENLERVLREDAFDIMITSYELAARDLFSKKRREGFPSYSGLLRAFRNVEFEYLVVDEAHRLKNDNSKINIGIRNYAKAQRRLLLTGTPLSNNLKELWSLMNVLNPQIFSSKATFETWFSAPF-SSQLDKKNARVGLTAAEKSVIVDRLHTVIRPFFRRRVRADVCPTFTSADEVVIRCPMSSLQKALMLHLQQR---ATAKDAGL---NNVVMAMRRFA---FLYYS 944
            EEV  P      +L+P+Q EG+ WL+ L   GLN ILADEMGLGKTIQ +S LA LV      GP L+I P    ++W  E   + P  +SV+ + G    R    ++ L  ++F+I++T+YE   RD              G+L     V ++Y+V+DE HR+KN + K+ + + +  +++ R+LLTGTPL NNL ELW+L+N L P IFSS  TFE WFSAPF +SQL        L+  E+ ++++RLH V+RPF  RR++ DV        E VIRC +S  QKAL   +Q R   A     G+   NNVVM +++     +L+Y 
Sbjct:  530 EEVRQPSLLVGGNLKPYQIEGLSWLVSLYNNGLNGILADEMGLGKTIQTLSLLAYLVEFKKVNGPFLIIVPLATLSNWVREANLWVPS-LSVIVYHGDPTTRKNLAQQELHNNSFNILLTTYEYVVRD-------------KGVLG---KVTWKYIVIDEGHRMKNADCKLALTLGSRYRSRNRILLTGTPLQNNLSELWALLNFLLPSIFSSSDTFEQWFSAPFQASQLGDAE----LSEEEQLLLINRLHQVLRPFLLRRLKTDVESQLPDKVERVIRCELSVWQKALYRQVQSRLALAAGDGTGVRTFNNVVMQLKKICNHPYLFYD 838          
BLAST of Ggra5679.t1 vs. uniprot
Match: A0A1S3SKS3 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like n=1 Tax=Salmo salar TaxID=8030 RepID=A0A1S3SKS3_SALSA)

HSP 1 Score: 204 bits (518), Expect = 2.530e-53
Identity = 116/291 (39.86%), Postives = 167/291 (57.39%), Query Frame = 0
Query:  638 SLQPHQSEGIKWLLMLDAQGLNAILADEMGLGKTIQAISFLASLVISGS-RGPHLVIAPRNVCAHWAEEVKKFYPGQISVVTHLGVADERFENLERVLREDAFDIMITSYELAARDLFSKKRREGFPSYSGLLRAFRNVEFEYLVVDEAHRLKNDNSKINIGIRNYAKAQRRLLLTGTPLSNNLKELWSLMNVLNPQIFSSKATFETWFSAPFSSQLDKKNARVGLTAAEKSVIVDRLHTVIRPFFRRRVRADVCPTFTSADEVVIRCPMSSLQKALMLHLQQRATAKDAG 927
            +++ +Q  G+ WL+ L   G+N ILADEMGLGKT+Q IS L  +    S  GPH+V+ P++   +W  E K++ P  +  V  +G  ++R   +  VL    +D+ +TSYE+    L  +K              F+   + YLV+DEAHR+KN+ SK++  +R + K   RLLLTGTPL NNL ELW+L+N L P IF S  TFE WF+APF+   +K    V L   E  +I+ RLH V+RPF  RR++ +V        E VI+C MS+LQ+ L  H+Q +      G
Sbjct:  157 TMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLYNWMNEFKRWVPS-LKAVCLIGDREQRNALIRDVLLPGEWDVCVTSYEM----LIIEKA------------VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF-KTTNRLLLTGTPLQNNLHELWALLNFLLPTIFKSCTTFEQWFNAPFAMTGEK----VDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDG 425          
The following BLAST results are available for this feature:
BLAST of Ggra5679.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX582.280e-28338.31Putative ATP-dependent DNA helicase CHR12 n=1 Tax=... [more]
R7QT482.180e-20342.76Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z7861.800e-5936.83SWI/SNF chromatin-remodeling complex subunit snf22... [more]
A0A086LQ531.820e-5437.75Putative SWI2/SNF2 Brahma-like (Fragment) n=1 Tax=... [more]
A0A7S1V1F33.920e-5437.50Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A453DY956.820e-5431.80Helicase ATP-binding domain-containing protein n=1... [more]
A0A6A4LB601.920e-5339.25Helicase ATP-binding domain-containing protein (Fr... [more]
A0A7C9ADA42.060e-5334.44Uncharacterized protein (Fragment) n=1 Tax=Opuntia... [more]
A0A7S0ZI342.480e-5340.30Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1S3SKS32.530e-5339.86SWI/SNF-related matrix-associated actin-dependent ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 635..844
e-value: 4.3E-33
score: 125.9
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 651..833
score: 24.485973
IPR000330SNF2, N-terminalPFAMPF00176SNF2-rel_domcoord: 656..922
e-value: 6.1E-53
score: 179.8
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 616..904
e-value: 1.1E-69
score: 236.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1409..1503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1421..1444
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1535..1592
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1606..1626
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1535..1665
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 454..486
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1454..1493
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 427..441
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..559
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1627..1665
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..534
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..241
NoneNo IPR availablePANTHERPTHR10799SNF2/RAD54 HELICASE FAMILYcoord: 217..937
coord: 955..1210
NoneNo IPR availablePANTHERPTHR10799:SF854ATP-DEPENDENT HELICASE BRMcoord: 217..937
NoneNo IPR availablePANTHERPTHR10799:SF854ATP-DEPENDENT HELICASE BRMcoord: 955..1210
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 627..885

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1335839..1341271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5679.t1Ggra5679.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1335839..1341271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5679.t1 ID=Ggra5679.t1|Name=Ggra5679.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1684bp
MAVIARPSTPAPRRTLRSYARNSRPVPIRATEAAGDPIVNSDEDINPKSP
IASKMRKALNDICIPETPIKSKPNEDVHSEPFAKVPVSSAAPTPSPALTS
SPERDDVEVLGPRKSDLSDASVLDVSHRVASRKNKIAEQKTTVNQPPSPR
SSKPHAEGEKRVTRSRSKYGFRRAGSNSQDRSQAILVSDDDDDDVVATKV
RPRSRRRLQRNAPTSDDDIQEVKTPPSNKRRRARSSSNPDDELPEDPADN
LELQAILSNASDETSATKMIMEWGTKEGRAKLRKQYGSYDEDEENGTRRS
KRITRSAAEQEAAGDETESDEETRLMRKRRKRRKAASASISTDDSDSDKP
NFESPATRARRNVNGVRTRRQIASLTDKQRPLRTESKSVPLPKVAGLLQK
RLKSRRKLVPQGSGKSKKLSKSTHVGQPESNDDDESHPKLRRSKRGLVKR
AHSSRSIYAEDKTESDDNRDKDFQNLDDTIKQLSDADDEVEGEEVVEMEL
EEVEESVASDEDDEVEEVMSEGDEDNEDVHSEDLFEEQEEIRRPRSRKKM
NGRRKRTRPKNIFQTQGAALTAREQQERLDFLVQQSATIAKDLHVAMAAQ
SGKHSDEMKNANGNGQPGNIVVEKEEEVFVPPTGENCSLQPHQSEGIKWL
LMLDAQGLNAILADEMGLGKTIQAISFLASLVISGSRGPHLVIAPRNVCA
HWAEEVKKFYPGQISVVTHLGVADERFENLERVLREDAFDIMITSYELAA
RDLFSKKRREGFPSYSGLLRAFRNVEFEYLVVDEAHRLKNDNSKINIGIR
NYAKAQRRLLLTGTPLSNNLKELWSLMNVLNPQIFSSKATFETWFSAPFS
SQLDKKNARVGLTAAEKSVIVDRLHTVIRPFFRRRVRADVCPTFTSADEV
VIRCPMSSLQKALMLHLQQRATAKDAGLNNVVMAMRRFAFLYYSLPRLLA
GDHRKKTVHILRLVTDRSVDDLIVEAARNKMKTQQVAVGAGKFNTSHGAA
LDQRMRQRDLEQLLQNLESVNYKEIDCHKGAASTGEGGASSSQQGEKIDQ
QIYMKWSEAILRTGERSLPDVSIDPIWIDSVDGCRPSDVPRWLKSDADIW
AAAKALGSPGPFAANQEYEDAVKSKALIGSYSKQGRAARARRQVINYDDF
SDLESGDDEKDPDLVINDVDIVEEESDIEITDNGSEENEKKIEARQRSSI
FQAWTQNLGNAGDAGFIEKAGSKVSTSQMPSKIATDVIEAGAATAVGNAV
PVPVGSNFKGSSTHPNGVLNKPTKHAGSSLGLASSRVVHTCPISQPTTVM
QKSGTKLANAYSTTLGNVPSALVPSFPFSSECKASNAWELQTNSTSKGTV
PTSEGNGLVDSVKPIMPVSQIRRKGRVPKKPTSQDHAAQYVLEYRRLCAS
IGIPALPENPRPEHMLEAVTQNGKKSASGLPRPPADSSSNADGGTGLPIG
LRKIAPTTSTNQVFSLLDSQSSGQTSKAEFSGLKSNPAPSQMTRASRDRP
EMPTLLRRTVPLRQAGVVQTPIYADLSQTKPSYMAKGTSFKSIQTNPRTK
PPGSVLPQETLSPDRAGQSRKQMPTTYRQTKLFSTKRSVNRGETQAYRPE
RKGTSGGKAQNGTLKRSFNTNHLLTTRSTERTDRTKKASRIQAHTNSKAH
PERSRRPAAKSTKEVVVISDSDDDFEISFSATT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR000330SNF2_N
IPR038718SNF2-like_sf
IPR027417P-loop_NTPase