Ggra5647.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5647.t1
Unique NameGgra5647.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length381
Homology
BLAST of Ggra5647.t1 vs. uniprot
Match: A0A2V3IUA6 (Pre-mRNA-splicing factor RBM22 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUA6_9FLOR)

HSP 1 Score: 575 bits (1481), Expect = 5.690e-204
Identity = 279/384 (72.66%), Postives = 314/384 (81.77%), Query Frame = 0
Query:    1 MSAANTKGDDFPILCETCLGPNPYVRMQKQPWASACKVCERPFTSFRWRPAGEATRPKKTEICQTCARAKNVCQTCLLDLEYGLPVQVRDASMAAGDRQRTVVPKSDGTREYAAAQSERAIVSGEVQAVYDAPKINDIAQRAKRITPRYERNRSRICSFFLKGACTRGLYCPYRHEKPKDVEHDADEAMEEQNLRDRYYGVNDPVASKIFRKLGVSVSARRGGAQGPSPPDDPTIQTLFIGGLNAAITESDLKLLFAECKGLSSISMISDKGFAFAEFESRQAAEQAIDTMYGKHLVNGTNIFINWGRGNRKR------QHRQSTDATQLLPSSNHGADEQAAKQGASS------RSQPEAKRPRTSQPKKHAWDLLDVANSKL 372
            MSA N KGDDFPILCETCLGPNPYVRMQK PW SACKVCERPFTSFRWRPAG  TRPKKTEICQTCARAKNVCQTCLLDLEYGLPVQVRDASMAAGDRQRTVVPKSDGT+EYAAAQSERAI +GE+ AVY APK+NDIA+RAKRITPRYERNR+RICSFFLKG CTRGLYCPYRHEKPKD + D DEA+EEQNLRDRYYGVNDPVA+KIFRKLGVS   RR G  GPS PDDPTIQTLF+GGL AA+ E+DL++LFAECKG+S ISMI  KGFAF +FESR+AAE+AI+  YGKH+VNGT +F+NWGRGNRKR      +   S+   Q  P+S+     + ++ G  S        +  AK+ R S   ++AWDLL   NS++
Sbjct:    1 MSAPNAKGDDFPILCETCLGPNPYVRMQKHPWGSACKVCERPFTSFRWRPAGNGTRPKKTEICQTCARAKNVCQTCLLDLEYGLPVQVRDASMAAGDRQRTVVPKSDGTKEYAAAQSERAIATGEIDAVYAAPKVNDIAERAKRITPRYERNRARICSFFLKGTCTRGLYCPYRHEKPKDAQDDLDEALEEQNLRDRYYGVNDPVAAKIFRKLGVSAGGRRNGQGGPSAPDDPTIQTLFVGGLTAAVKEADLRMLFAECKGISDISMIEGKGFAFVQFESREAAEEAINANYGKHIVNGTQVFVNWGRGNRKRARAHDARENDSSATGQDAPTSSTDQGRKTSQLGTESVPNHLSGREHGAKKMRKSSASRYAWDLLAATNSRV 384          
BLAST of Ggra5647.t1 vs. uniprot
Match: R7QHF4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHF4_CHOCR)

HSP 1 Score: 440 bits (1131), Expect = 4.680e-150
Identity = 222/400 (55.50%), Postives = 280/400 (70.00%), Query Frame = 0
Query:    2 SAANTKGDDFPILCETCLGPNPYVRMQKQPWASACKVCERPFTSFRWRPAGEATRPKKTEICQTCARAKNVCQTCLLDLEYGLPVQVRDASMAAGDRQRTVVPKSDGTREYAAAQSERAIVSGEVQAVYDAPKINDIAQRAKRITPRYERNRSRICSFFLKGACTRGLYCPYRHEKPKDVEHDADEAMEEQNLRDRYYGVNDPVASKIFRKLGVS-------VSARRGGAQGPSPPDDPTIQTLFIGGLNAAITESDLKLLFAECKGLSSISMISDKGFAFAEFESRQAAEQAIDTMYGKHLVNGTNIFINWGRGNRKRQHR-----QSTDATQ---------LLPSSNHGADEQAAKQGASSRSQPEAKRPRTSQPKKHAWDLLDVANSKLPVRDQSNT 380
            +A    GD+FPILCETCLGPNPY+RM +  W +ACKVCERPFTSFRWRPAG+ TRPKKTE+CQTCARAKNVCQTCLLDL+YGLPVQVRDAS+A GDRQR VVP+SDGTREYAAAQSERAI +G V  VY AP +N IA+RAKR  P+YERNR+R+CSFFLKG CTRGLYCPYRHEKP   E D +  M EQN+RDRYYGVNDPVA+KIF  LG+S       VS R GGA  P  P+D ++++LFIGG+   + E  L+ LF+ C  LS +S+++ +G AF +F  R AAE+A+  ++G   VNG  +F+NW RG+  ++ R     Q  DA++         L P++   A++   K+    R++P A  PR++    H      V  +  P +D + T
Sbjct:    7 AATGNPGDEFPILCETCLGPNPYIRMTRHAWGNACKVCERPFTSFRWRPAGQGTRPKKTEVCQTCARAKNVCQTCLLDLQYGLPVQVRDASLAPGDRQRAVVPQSDGTREYAAAQSERAIATGIVDRVYAAPTVNSIAERAKRTAPKYERNRARVCSFFLKGTCTRGLYCPYRHEKP---EKDEESGMAEQNIRDRYYGVNDPVAAKIFGNLGMSADGKQAVVSKRGGGAAAPPVPEDGSVKSLFIGGVKPGVDEESLRQLFSGCARLSRMSVLTSRGIAFVDFADRAAAEEAMQRVHGAQDVNGCRVFVNWARGSTNKRARVPDPSQHLDASRDGGKGGGHGLQPAALSAAEDYTVKR---QRAEPAATAPRSAADAAHR----PVRPAHTPPQDAAKT 396          
BLAST of Ggra5647.t1 vs. uniprot
Match: M2WTR8 (Pre-mRNA-splicing factor RBM22/SLT11 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WTR8_GALSU)

HSP 1 Score: 337 bits (863), Expect = 1.510e-110
Identity = 159/323 (49.23%), Postives = 213/323 (65.94%), Query Frame = 0
Query:    4 ANTKGDDFPILCETCLGPNPYVRMQKQPWASACKVCERPFTSFRWRPAGEATRPKKTEICQTCARAKNVCQTCLLDLEYGLPVQVRDASMAAGDRQRTVVPKSDGTREYAAAQSERAIVSGEVQAVYDAPKINDIAQRAKRITPRYERNRSRICSFFLKGACTRGLYCPYRHEKPKDVEHDADEAMEEQNLRDRYYGVNDPVASKIFRKLGVSVSARRGGAQGPSPPDDPTIQTLFIGGLNAAITESDLKLLFAECKGLSSISMISDKGFAFAEFESRQAAEQAIDTMYGKHLVNGTNIFINWGRGNRKRQHRQSTDATQLLP 326
            A T+  DFPILCE+CLGPNPY+RM K    + C++C RPFT FRW+P G  TR KKTEICQTCAR KNVCQTCL DL YGLPVQVRD ++A GDR  T+VPKSD  REY A Q++R + +G V+AVY  P  N I ++  R  PRY RN S +CSF+ KG C RG  CPYRHE+  D     DE +  Q +++RYYGVNDP+A K+ R+LG   S        P PP DP  +TLF+GG+ + ++  ++  LF +   + +I +I +K  AF EF+ R AAE+ ++T+YGK  + G  +F+NW + + +  +    D + +LP
Sbjct:   19 AATESADFPILCESCLGPNPYIRMLKDSMGAECQICTRPFTCFRWKPGGAGTRYKKTEICQTCARLKNVCQTCLFDLRYGLPVQVRDQAIAEGDRLATLVPKSDINREYFAEQADRLVATGNVEAVYQQPATNPIVEKLARKEPRYHRNLSHVCSFYQKGECKRGALCPYRHERAPD-----DEQLTTQGIKNRYYGVNDPLAEKMLRRLGEKTSF-------PEPPTDPKAKTLFVGGVGSLVSYEEIAQLFEKYGEIENIKVIREKSIAFIEFKERIAAERTMETLYGKVHLGGQKVFLNWAKPHEENDNLN--DPSTMLP 327          
BLAST of Ggra5647.t1 vs. uniprot
Match: A0A7S2ZME9 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZME9_9RHOD)

HSP 1 Score: 335 bits (859), Expect = 6.310e-109
Identity = 157/342 (45.91%), Postives = 223/342 (65.20%), Query Frame = 0
Query:    5 NTKGDDFPILCETCLGPNPYVRMQKQPWASACKVCERPFTSFRWRPAGEATRPKKTEICQTCARAKNVCQTCLLDLEYGLPVQVRDASMAAGDRQRTVVPKSDGTREYAAAQSERAIVSGEVQAVYDAPKIND-IAQRAKRITPRYERNRSRICSFFLKGACTRGLYCPYRHEKPKDVEHDADEAMEEQNLRDRYYGVNDPVASKIFRKLGVSVSARRGGAQGPSPPDDPTIQTLFIGGLNAAITESDLKLLFAECKGLSSISMISDKGFAFAEFESRQAAEQAIDTMYGKHLVNGTNIFINWGRGNRKRQH--------------RQSTDATQLLPSSNHG 331
            + +  +FP+LCETCLGPNPYV+M K+ +   CK+C RPF  FRW+P G+ TR KKTEICQTCAR KNVCQTCL DL+YGLPVQVRD ++A  DRQ T++PKSD  RE+ A   ERA+ +G++  +Y++   N  +A++  R  P YERNR+ +CSFF +G CTRG YCPYRHE  ++ E      + +QN++DRYYGVNDPVA K+ + L  ++  + G    P  P D +++TLF+GG+   ITE++L+  F     +SS+ +I+DKG AF E +SRQ+AE A+  ++G   + G  + + W +  + R+               R+  DAT +LP+   G
Sbjct:   19 SVEAAEFPMLCETCLGPNPYVKMMKESYGRECKICTRPFVVFRWKPGGDGTRYKKTEICQTCARVKNVCQTCLFDLQYGLPVQVRDQTLAEADRQATIIPKSDVNREFTAGMQERAVANGDIDKIYESESGNKALAEKLARKGPYYERNRTHVCSFFARGECTRGAYCPYRHEMVQETE------LSDQNMKDRYYGVNDPVAQKMLKGLDGALGKKFGP---PPAPADQSVRTLFVGGVTGLITEAELREHFQASGEISSVRLITDKGIAFVEMKSRQSAEAAVQALHGNLNIAGARLSVKWAKPQKGREEDRTGDGLMPNPTGDRRPEDATSMLPNQGIG 351          
BLAST of Ggra5647.t1 vs. uniprot
Match: A0A3B4TGD8 (Pre-mRNA-splicing factor RBM22 n=6 Tax=Acanthomorphata TaxID=123368 RepID=A0A3B4TGD8_SERDU)

HSP 1 Score: 296 bits (757), Expect = 3.060e-93
Identity = 146/313 (46.65%), Postives = 196/313 (62.62%), Query Frame = 0
Query:    5 NTKGDDFPILCETCLGPNPYVRMQKQPWASACKVCERPFTSFRWRPAGEATRPKKTEICQTCARAKNVCQTCLLDLEYGLPVQVRDASMAAGDRQRTVVPKSDGTREYAAAQSERAIVSGE----VQAVYDAPKINDIAQRAKRITPRYERNRSRICSFFLKGACTRGLYCPYRHEKPKDVEHDADEAMEEQNLRDRYYGVNDPVASKIFRKLGVSVSARRGGAQGPSPPDDPTIQTLFIGGLNAAITESDLKLLFAECKGLSSISMISDKGFAFAEFESRQAAEQAIDTMYGKHLVNGTNIFINWGRGNRKR 313
            +T G DFPILC+TCLG NPY+RM K+ +   CK+C RPFT FRW P G   R KKTE+CQTC++ KNVCQTCLLDLEYGLP+QVRD  +A  D     VPKSD  +EY     ER I + +    V  +  AP  +D+  +  R TP Y+RNR  ICSF++KG C RG  CPYRHEKP D     D+ + +QN++DRYYG+NDPVA K+ ++                PP+D +I TL+IGGL   +T+ DLK  F +   + +I+++  +  AF +F +RQAAE A +  + K ++NG  + + WGR    R
Sbjct:   52 STDGKDFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCP-GTRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLAIKDE----VPKSDVNKEYYTQNMEREIANSDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTD----PDDPLADQNIKDRYYGINDPVADKLLKRASTMPRL--------DPPEDKSITTLYIGGLGDTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQAAEMAAEKSFNKLIINGRRLTVKWGRSQAAR 347          
BLAST of Ggra5647.t1 vs. uniprot
Match: A0A803VAK7 (Pre-mRNA-splicing factor RBM22 n=1 Tax=Ficedula albicollis TaxID=59894 RepID=A0A803VAK7_FICAL)

HSP 1 Score: 293 bits (751), Expect = 3.390e-93
Identity = 153/337 (45.40%), Postives = 206/337 (61.13%), Query Frame = 0
Query:    5 NTKGDDFPILCETCLGPNPYVRMQKQPWASACKVCERPFTSFRWRPAGEATRPKKTEICQTCARAKNVCQTCLLDLEYGLPVQVRDASMAAGDRQRTVVPKSDGTREYAAAQSERAIVSGE----VQAVYDAPKINDIAQRAKRITPRYERNRSRICSFFLKGACTRGLYCPYRHEKPKDVEHDADEAMEEQNLRDRYYGVNDPVASKIFRKLGVSVSARRGGAQGPSPPDDPTIQTLFIGGLNAAITESDLKLLFAECKGLSSISMISDKGFAFAEFESRQAAEQAIDTMYGKHLVNGTNIFINWGRGNRKRQHRQSTDATQLLPSSNHGADEQAA 337
            N +  DFPILC+TCLG NPY+RM K+ +   CK+C RPFT FRW P G   R KKTE+CQTC++ KNVCQTCLLDLEYGLP+QVRDA ++  D     +PKSD  +EY     ER I + +    V A+  A   +D+  +  R TP Y+RNR  ICSF++KG C RG  CPYRHEKP D     D+ + +QN++DRYYG+NDPVA K+ ++                PP+D TI TL++GGL   ITESDL+  F +   + +I+++  +  AF +F +RQAAE A +  + K +VNG  + + WGR         S  AT   P+ +    +QAA
Sbjct:   14 NWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCP-GVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDE----MPKSDVNKEYYTQNMEREIANSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTD----PDDPLADQNIKDRYYGINDPVADKLLKRASTMPRL--------DPPEDKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGR---------SQAATPAFPAQSCAGGQQAA 324          
BLAST of Ggra5647.t1 vs. uniprot
Match: A0A8C0AZ40 (Pre-mRNA-splicing factor RBM22 n=45 Tax=Aves TaxID=8782 RepID=A0A8C0AZ40_9AVES)

HSP 1 Score: 293 bits (751), Expect = 3.720e-93
Identity = 148/317 (46.69%), Postives = 198/317 (62.46%), Query Frame = 0
Query:   10 DFPILCETCLGPNPYVRMQKQPWASACKVCERPFTSFRWRPAGEATRPKKTEICQTCARAKNVCQTCLLDLEYGLPVQVRDASMAAGDRQRTVVPKSDGTREYAAAQSERAIVSGE----VQAVYDAPKINDIAQRAKRITPRYERNRSRICSFFLKGACTRGLYCPYRHEKPKDVEHDADEAMEEQNLRDRYYGVNDPVASKIFRKLGVSVSARRGGAQGPSPPDDPTIQTLFIGGLNAAITESDLKLLFAECKGLSSISMISDKGFAFAEFESRQAAEQAIDTMYGKHLVNGTNIFINWGRGNRKRQHRQSTDAT 322
            DFPILC+TCLG NPY+RM K+ +   CK+C RPFT FRW P G   R KKTE+CQTC++ KNVCQTCLLDLEYGLP+QVRDA ++  D     +PKSD  +EY     ER I + +    V A+  A   +D+  +  R TP Y+RNR  ICSF++KG C RG  CPYRHEKP D     D+ + +QN++DRYYG+NDPVA K+ ++                PPDD TI TL++GGL   ITESDL+  F +   + +I+++  +  AF +F +RQAAE A +  + K +VNG  + + WGR    R   +  + T
Sbjct:    1 DFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCP-GVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDE----MPKSDVNKEYYTQNMEREISNSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTD----PDDPLADQNIKDRYYGINDPVADKLLKRASTMPRL--------DPPDDKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKDKEGT 300          
BLAST of Ggra5647.t1 vs. uniprot
Match: A0A672U2V2 (Pre-mRNA-splicing factor RBM22 n=34 Tax=Aves TaxID=8782 RepID=A0A672U2V2_STRHB)

HSP 1 Score: 294 bits (752), Expect = 4.550e-93
Identity = 149/322 (46.27%), Postives = 200/322 (62.11%), Query Frame = 0
Query:    5 NTKGDDFPILCETCLGPNPYVRMQKQPWASACKVCERPFTSFRWRPAGEATRPKKTEICQTCARAKNVCQTCLLDLEYGLPVQVRDASMAAGDRQRTVVPKSDGTREYAAAQSERAIVSGE----VQAVYDAPKINDIAQRAKRITPRYERNRSRICSFFLKGACTRGLYCPYRHEKPKDVEHDADEAMEEQNLRDRYYGVNDPVASKIFRKLGVSVSARRGGAQGPSPPDDPTIQTLFIGGLNAAITESDLKLLFAECKGLSSISMISDKGFAFAEFESRQAAEQAIDTMYGKHLVNGTNIFINWGRGNRKRQHRQSTDAT 322
            N +  DFPILC+TCLG NPY+RM K+ +   CK+C RPFT FRW P G   R KKTE+CQTC++ KNVCQTCLLDLEYGLP+QVRDA ++  D     +PKSD  +EY     ER I + +    V A+  A   +D+  +  R TP Y+RNR  ICSF++KG C RG  CPYRHEKP D     D+ + +QN++DRYYG+NDPVA K+ ++                PPDD TI TL++GGL   ITESDL+  F +   + +I+++  +  AF +F +RQAAE A +  + K +VNG  + + WGR    R   +  + T
Sbjct:   14 NWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCP-GVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDE----MPKSDVNKEYYTQNMEREISNSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTD----PDDPLADQNIKDRYYGINDPVADKLLKRASTMPRL--------DPPDDKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKDKDKEGT 318          
BLAST of Ggra5647.t1 vs. uniprot
Match: H0YRG9 (Pre-mRNA-splicing factor RBM22 n=49 Tax=Neognathae TaxID=8825 RepID=H0YRG9_TAEGU)

HSP 1 Score: 294 bits (752), Expect = 4.550e-93
Identity = 148/322 (45.96%), Postives = 200/322 (62.11%), Query Frame = 0
Query:    5 NTKGDDFPILCETCLGPNPYVRMQKQPWASACKVCERPFTSFRWRPAGEATRPKKTEICQTCARAKNVCQTCLLDLEYGLPVQVRDASMAAGDRQRTVVPKSDGTREYAAAQSERAIVSGE----VQAVYDAPKINDIAQRAKRITPRYERNRSRICSFFLKGACTRGLYCPYRHEKPKDVEHDADEAMEEQNLRDRYYGVNDPVASKIFRKLGVSVSARRGGAQGPSPPDDPTIQTLFIGGLNAAITESDLKLLFAECKGLSSISMISDKGFAFAEFESRQAAEQAIDTMYGKHLVNGTNIFINWGRGNRKRQHRQSTDAT 322
            N +  DFPILC+TCLG NPY+RM K+ +   CK+C RPFT FRW P G   R KKTE+CQTC++ KNVCQTCLLDLEYGLP+QVRDA ++  D     +PKSD  +EY     ER I + +    V A+  A   +D+  +  R TP Y+RNR  ICSF++KG C RG  CPYRHEKP D     D+ + +QN++DRYYG+NDPVA K+ ++                PP+D TI TL++GGL   ITESDL+  F +   + +I+++  +  AF +F +RQAAE A +  + K +VNG  + + WGR    R   +  + T
Sbjct:   14 NWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCP-GVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDE----MPKSDVNKEYYTQNMEREIANSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTD----PDDPLADQNIKDRYYGINDPVADKLLKRASTMPRL--------DPPEDKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKDKEGT 318          
BLAST of Ggra5647.t1 vs. uniprot
Match: A0A091JBK8 (Pre-mRNA-splicing factor RBM22 (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A091JBK8_EGRGA)

HSP 1 Score: 293 bits (750), Expect = 5.260e-93
Identity = 147/317 (46.37%), Postives = 198/317 (62.46%), Query Frame = 0
Query:   10 DFPILCETCLGPNPYVRMQKQPWASACKVCERPFTSFRWRPAGEATRPKKTEICQTCARAKNVCQTCLLDLEYGLPVQVRDASMAAGDRQRTVVPKSDGTREYAAAQSERAIVSGE----VQAVYDAPKINDIAQRAKRITPRYERNRSRICSFFLKGACTRGLYCPYRHEKPKDVEHDADEAMEEQNLRDRYYGVNDPVASKIFRKLGVSVSARRGGAQGPSPPDDPTIQTLFIGGLNAAITESDLKLLFAECKGLSSISMISDKGFAFAEFESRQAAEQAIDTMYGKHLVNGTNIFINWGRGNRKRQHRQSTDAT 322
            DFPILC+TCLG NPY+RM K+ +   CK+C RPFT FRW P G   R KKTE+CQTC++ KNVCQTCLLDLEYGLP+QVRDA ++  D     +PKSD  +EY     ER I + +    V A+  A   +D+  +  R TP Y+RNR  ICSF++KG C RG  CPYRHEKP D     D+ + +QN++DRYYG+NDPVA K+ ++                PPDD TI TL++GGL   ITESDL+  F +   + +++++  +  AF +F +RQAAE A +  + K +VNG  + + WGR    R   +  + T
Sbjct:    1 DFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCP-GVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDE----MPKSDVNKEYYTQNMEREISNSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTD----PDDPLADQNIKDRYYGINDPVADKLLKRASTMPRL--------DPPDDKTITTLYVGGLGDTITESDLRNHFYQFGEIRTVTVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKDKEGT 300          
The following BLAST results are available for this feature:
BLAST of Ggra5647.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUA65.690e-20472.66Pre-mRNA-splicing factor RBM22 n=1 Tax=Gracilariop... [more]
R7QHF44.680e-15055.50Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2WTR81.510e-11049.23Pre-mRNA-splicing factor RBM22/SLT11 n=1 Tax=Galdi... [more]
A0A7S2ZME96.310e-10945.91Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A3B4TGD83.060e-9346.65Pre-mRNA-splicing factor RBM22 n=6 Tax=Acanthomorp... [more]
A0A803VAK73.390e-9345.40Pre-mRNA-splicing factor RBM22 n=1 Tax=Ficedula al... [more]
A0A8C0AZ403.720e-9346.69Pre-mRNA-splicing factor RBM22 n=45 Tax=Aves TaxID... [more]
A0A672U2V24.550e-9346.27Pre-mRNA-splicing factor RBM22 n=34 Tax=Aves TaxID... [more]
H0YRG94.550e-9345.96Pre-mRNA-splicing factor RBM22 n=49 Tax=Neognathae... [more]
A0A091JBK85.260e-9346.37Pre-mRNA-splicing factor RBM22 (Fragment) n=3 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 237..305
e-value: 1.4E-15
score: 67.8
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 238..298
e-value: 5.6E-13
score: 48.5
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 236..309
score: 15.562085
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 151..177
e-value: 7.8E-5
score: 32.1
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 151..178
score: 14.624088
NoneNo IPR availableGENE3D4.10.1000.10coord: 141..202
e-value: 1.2E-5
score: 27.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..380
NoneNo IPR availablePANTHERPTHR14089:SF6PRE-MRNA-SPLICING FACTOR RBM22coord: 3..343
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 223..319
e-value: 7.3E-18
score: 66.6
IPR039171Pre-mRNA-splicing factor Cwc2/Slt11PANTHERPTHR14089PRE-MRNA-SPLICING FACTOR RBM22coord: 3..343
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 153..176
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 227..318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1240086..1241228 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5647.t1Ggra5647.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1240086..1241228 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5647.t1 ID=Ggra5647.t1|Name=Ggra5647.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=381bp
MSAANTKGDDFPILCETCLGPNPYVRMQKQPWASACKVCERPFTSFRWRP
AGEATRPKKTEICQTCARAKNVCQTCLLDLEYGLPVQVRDASMAAGDRQR
TVVPKSDGTREYAAAQSERAIVSGEVQAVYDAPKINDIAQRAKRITPRYE
RNRSRICSFFLKGACTRGLYCPYRHEKPKDVEHDADEAMEEQNLRDRYYG
VNDPVASKIFRKLGVSVSARRGGAQGPSPPDDPTIQTLFIGGLNAAITES
DLKLLFAECKGLSSISMISDKGFAFAEFESRQAAEQAIDTMYGKHLVNGT
NIFINWGRGNRKRQHRQSTDATQLLPSSNHGADEQAAKQGASSRSQPEAK
RPRTSQPKKHAWDLLDVANSKLPVRDQSNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR000571Znf_CCCH
IPR012677Nucleotide-bd_a/b_plait_sf
IPR039171Cwc2/Slt11
IPR036855Znf_CCCH_sf
IPR035979RBD_domain_sf