Ggra5558.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5558.t1
Unique NameGgra5558.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length250
Homology
BLAST of Ggra5558.t1 vs. uniprot
Match: A0A2V3IU83 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU83_9FLOR)

HSP 1 Score: 288 bits (738), Expect = 2.440e-95
Identity = 147/226 (65.04%), Postives = 172/226 (76.11%), Query Frame = 0
Query:   28 RLTRVKVAPFARSKATRLPIEA-----RLPSETEPLAADDKNWVDVISEAACSLAGVYFALGGIPAAHAVPDALKEAFKSKPASLAHPVVMWTLLGTCLYTFYLGYQSSLIRKSEPAKRKELVKKKVTETHFRTSSSLFAVMTLATFGGMANTYTRTGKLFPGPHLYAGLGLVALFSVMTAFVPYMQKGKEWARQAHFSLAFVAAGLFGWQAKSGMVIVGKLLGWD 248
            +L  V+    A+  A R+ + A     +  S  +P   +  +  +VI +A   + G+Y A+    AA+A+PD +KE FK+ PASL HP VMW L+GT LYTFYLGYQSSLIRKSEPAKRKELVKK VT+ HF+TSS LFAVMTLATFGGMANT+ RTGKLFPGPHLYAGLGLVA  SVMTAFVPYMQKGKEWARQ+HF+LAF+A GLFGWQ KSGM IVGKLL WD
Sbjct:   26 QLQSVRTVSPAQRHAARIAVTAASGVEKTESGVQPACMEQGDNSNVIRDAGICMLGMYLAMSESEAAYAIPDGVKETFKTIPASLVHPAVMWILVGTSLYTFYLGYQSSLIRKSEPAKRKELVKKNVTQRHFQTSSGLFAVMTLATFGGMANTFARTGKLFPGPHLYAGLGLVATMSVMTAFVPYMQKGKEWARQSHFTLAFLAVGLFGWQVKSGMAIVGKLLKWD 251          
BLAST of Ggra5558.t1 vs. uniprot
Match: A0A7S1XAG2 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XAG2_9RHOD)

HSP 1 Score: 204 bits (518), Expect = 5.570e-62
Identity = 101/156 (64.74%), Postives = 121/156 (77.56%), Query Frame = 0
Query:   94 DALKEAFKSKPASLAHPVVM-WTLLGTCLYTFYLGYQSSLIRKSEPAKRKELVKKKVTETHFRTSSSLFAVMTLATFGGMANTYTRTGKLFPGPHLYAGLGLVALFSVMTAFVPYMQKGKEWARQAHFSLAFVAAGLFGWQAKSGMVIVGKLLGWD 248
             ALK  FK+K  S+AHPV M W LLG  LYTFYLG+++  +RK  P +RKEL+K +  + HF TSS +  +MT+ TF GMANTYTRTGKLFPGPHLYAGLGLVAL +VM + VP MQKG+ WA+  HF+LAFVA  LFGWQA+SG+VIVGKLLGW 
Sbjct:   99 SALKALFKTKVLSMAHPVAMGWFLLGA-LYTFYLGWKAQQVRKVGPEERKELIKGQFGKKHFETSSIIMTLMTIFTFEGMANTYTRTGKLFPGPHLYAGLGLVALMTVMASLVPAMQKGESWAKDVHFALAFVAIALFGWQAQSGLVIVGKLLGWS 253          
BLAST of Ggra5558.t1 vs. uniprot
Match: A0A1X6NLK0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLK0_PORUM)

HSP 1 Score: 191 bits (486), Expect = 1.640e-57
Identity = 102/158 (64.56%), Postives = 116/158 (73.42%), Query Frame = 0
Query:   92 VPDALKEAFKSKPASLAHPVVMWTLLGTCLYTFYLGYQSSLIRKSE-PAKRKELVKKKVTETHFRTSSSLFAVMTLATFGGMANTYTRTGKLFPGPHLYAGLGLVALFSVMTAFVPYMQKG--KEWARQAHFSLAFVAAGLFGWQAKSGMVIVGKLLG 246
            VP ALKEAFK+KPASL HPVVM  +L   +YTF+LGYQSS +RK E PAKRKEL K K    HF  SS +  +MT  TF GMANT+TRTGKLFPGPHLYAGLGLVA  + M + VP MQ+G  K  A+ AHF+LA  A GLFGWQ  SG+ IV KLLG
Sbjct:   68 VPPALKEAFKTKPASLVHPVVMAGILAAAIYTFWLGYQSSRLRKEEDPAKRKELAKGKFGARHFALSSQILVLMTTMTFIGMANTFTRTGKLFPGPHLYAGLGLVAWLTAMASLVPSMQQGNNKVQAKDAHFALAVGALGLFGWQLNSGLAIVKKLLG 225          
BLAST of Ggra5558.t1 vs. uniprot
Match: A0A5J4Z3H9 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3H9_PORPP)

HSP 1 Score: 189 bits (481), Expect = 2.460e-56
Identity = 104/197 (52.79%), Postives = 129/197 (65.48%), Query Frame = 0
Query:   52 PSETEPLAADDKNWVDVISEAACSLAGVYFALGGIPAAHAVPDALKEAFKSKPASLAHPVVMWTLLGTCLYTFYLGYQSSLIRKSEPA-KRKELVKKKVTETHFRTSSSLFAVMTLATFGGMANTYTRTGKLFPGPHLYAGLGLVALFSVMTAFVPYMQKGKEWARQAHFSLAFVAAGLFGWQAKSGMVIVGKLLGW 247
            PS  + LA   +    +++ AA +LA V   + G P A    D L E  K+KPASL HP+ MW L GTC YT YLG+Q   ++ ++ A K+KEL K+K  + HF  SSSL AV+TL TF GMANT++R GKLFPGPHLYAGLGLVA  + M + VP MQK  + AR AH +      GLF WQAK+GM IVGKLLGW
Sbjct:   64 PSVQQDLAHAQEFDQTMVTAAALALALV---MVGAPDAANAADGLTELMKTKPASLVHPITMWILFGTCAYTGYLGWQVRELKTTDDAEKKKELAKEKPGQKHFAMSSSLMAVVTLVTFEGMANTFSRAGKLFPGPHLYAGLGLVATMTFMASLVPAMQKSSKPARDAHLAAGVFVIGLFAWQAKTGMDIVGKLLGW 257          
BLAST of Ggra5558.t1 vs. uniprot
Match: M2X3C2 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X3C2_GALSU)

HSP 1 Score: 187 bits (474), Expect = 2.330e-55
Identity = 102/201 (50.75%), Postives = 131/201 (65.17%), Query Frame = 0
Query:   48 EARLPSETEPLAADDKNWVDVISEAACSLAGVYFALGGIPAAHAVPDALKEAFKSKPASLAHPVVMWTLLGTCLYTFYLGYQSSLIRKSEPAKRKELVKKKVTETHFRTSSSLFAVMTLATFGGMANTYTRTGKLFPGPHLYAGLGLVALFSVMTAFVPYMQKGKEWARQAHFSLAFVAAGLFGWQAKSGMVIVGKLLGWD 248
            +A LPS T     + K +    S     LA +   L     A A+ D L++ FKSKP SL HP VM  +LGT LYTFYLGYQS  IR+++   +K+LVK +  + H++TS+ L AV+T  TF GMANT+TRTGKLFPGPHLYAGLG V + S+M +  P+MQ+GK  AR  HF LAFV  GL G Q +SG  I+ +LLGW+
Sbjct:   55 KASLPSPTGSDVVESKEYSSQYSLGI--LAAILLLLPESAEASAL-DVLQDIFKSKPGSLVHPFVMLGVLGTSLYTFYLGYQSRRIREADSETKKQLVKGRFGQRHYQTSAILLAVLTFFTFEGMANTFTRTGKLFPGPHLYAGLGSVTVMSIMASLAPFMQQGKNTARNIHFVLAFVVVGLIGSQLQSGYHILARLLGWE 252          
BLAST of Ggra5558.t1 vs. uniprot
Match: A0A7S0G8L8 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G8L8_9RHOD)

HSP 1 Score: 161 bits (408), Expect = 6.910e-47
Identity = 81/139 (58.27%), Postives = 99/139 (71.22%), Query Frame = 0
Query:  109 HPVVMWTLLGTCLYTFYLGYQSSLIRKSEPAK-RKELVKKKVTETHFRTSSSLFAVMTLATFGGMANTYTRTGKLFPGPHLYAGLGLVALFSVMTAFVPYMQKGKEWARQAHFSLAFVAAGLFGWQAKSGMVIVGKLLG 246
            HP+ MW  +G   Y FYLG Q+  +R +   + +K+L KKK  + HF  S+ L A  T  TF GMANTYTRTGKLFPGPHLYAGLG+V++ + MTA VP MQK + WAR  HF+LA  A GLFGWQAK+G+ IVGKLLG
Sbjct:    1 HPLAMWGAVGYAGYVFYLGSQARTLRTTADQEVKKDLAKKKPGQKHFVLSAWLLAATTFFTFEGMANTYTRTGKLFPGPHLYAGLGIVSILAFMTALVPAMQKNQLWARNTHFTLAVGALGLFGWQAKTGLDIVGKLLG 139          
BLAST of Ggra5558.t1 vs. uniprot
Match: A0A7J7IM36 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IM36_9RHOD)

HSP 1 Score: 159 bits (402), Expect = 1.700e-45
Identity = 85/165 (51.52%), Postives = 105/165 (63.64%), Query Frame = 0
Query:   84 GGIPAAHAVPDALKEAFKSKPASLAHPVVMWTLLGTCLYTFYLGYQSSLIRKSEPAKRK-ELVKKKVTETHFRTSSSLFAVMTLATFGGMANTYTRTGKLFPGPHLYAGLGLVALFSVMTAFVPYMQKGKEWARQAHFSLAFVAAGLFGWQAKSGMVIVGKLLGW 247
            G   AA      LK  FKS P SL HP+VM  +L T  Y FYLG+++  +R +   + K ++ + K  E H++ +S L AVMT+ TF GMANTYTRTGKLFPGPHLY GL  VAL SVM +  P M++G   AR  HF+LAF   G F WQ +SG  IV KLLGW
Sbjct:   12 GFAEAAETSESTLKSLFKSLPLSLVHPMVMDGMLLTTFYVFYLGFRARTLRTTSDKELKLKIARSKPGERHYQLASILLAVMTVTTFEGMANTYTRTGKLFPGPHLYIGLSTVALMSVMASLAPAMRQGSTTARNVHFALAFAVTGGFLWQLQSGFEIVLKLLGW 176          
BLAST of Ggra5558.t1 vs. uniprot
Match: M1UV18 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UV18_CYAM1)

HSP 1 Score: 156 bits (395), Expect = 1.810e-43
Identity = 87/160 (54.37%), Postives = 109/160 (68.12%), Query Frame = 0
Query:   91 AVPDA-LKEAFKSKPASLAHPVVM-WTLLGTCLYTFYLGYQSSLIRKSEPAKRK-ELVKKKVTETHFRTSSSLFAVMTLATFGGMANTYTRTGKLFPGPHLYAGLGLVALFSVMTAFVPYMQKGKEWARQAHFSLAFVAAGLFGWQAKSGMVIVGKLLGW 247
            A P++ LK  FKS P SL HP+VM   LLGT LY FYLGYQ+  +R ++  + K +L + K  + H++ +S L AVMT+ TF GMANTYTRTGKLFPGPHLY GL  VAL S+M +  P M++G   AR AHF++AF   G   WQ +SG  IV KLLGW
Sbjct:   95 AAPESPLKALFKSLPLSLVHPLVMDGVLLGT-LYAFYLGYQARTMRTTKDKELKMKLAQAKPGDRHYQIASILLAVMTVTTFEGMANTYTRTGKLFPGPHLYVGLASVALMSMMASLAPAMRRGNTAARNAHFAMAFAVTGGLVWQLQSGFEIVLKLLGW 253          
BLAST of Ggra5558.t1 vs. uniprot
Match: A0A1E5QJ92 (Uncharacterized protein n=2 Tax=unclassified Desertifilum TaxID=2621682 RepID=A0A1E5QJ92_9CYAN)

HSP 1 Score: 134 bits (337), Expect = 5.500e-36
Identity = 62/137 (45.26%), Postives = 84/137 (61.31%), Query Frame = 0
Query:  109 HPVVMWTLLGTCLYTFYLGYQSSLIRKSEPAKRKELVKKKVTETHFRTSSSLFAVMTLATFGGMANTYTRTGKLFPGPHLYAGLGLVALFSVMTAFVPYMQKGKEWARQAHFSLAFVAAGLFGWQAKSGMVIVGKLL 245
            HP+ MW +L   +Y  YLG +    R +E   +KEL+K +    H++  S L A M     GGMA TY   GKLF GPHL AGLG+V LFS+  A  P+MQKGK+WAR  H ++  +  GLF WQA +G+ IV +++
Sbjct:   17 HPIFMWVVLALSVYALYLGIKIQQTRAAEGEAKKELIKGRFNVRHYQLGSILLAFMVTGALGGMAVTYINNGKLFVGPHLLAGLGIVGLFSISAALSPFMQKGKDWARFTHITINLIVLGLFAWQAVTGVQIVQRII 153          
BLAST of Ggra5558.t1 vs. uniprot
Match: A0A1Q8Z6W6 (Uncharacterized protein n=1 Tax=Leptolyngbya sp. 'hensonii' TaxID=1922337 RepID=A0A1Q8Z6W6_9CYAN)

HSP 1 Score: 134 bits (337), Expect = 5.830e-36
Identity = 66/137 (48.18%), Postives = 83/137 (60.58%), Query Frame = 0
Query:  109 HPVVMWTLLGTCLYTFYLGYQSSLIRKSEPAKRKELVKKKVTETHFRTSSSLFAVMTLATFGGMANTYTRTGKLFPGPHLYAGLGLVALFSVMTAFVPYMQKGKEWARQAHFSLAFVAAGLFGWQAKSGMVIVGKLL 245
            HP++MW +L   LY  Y G Q    R ++   +K LV+ K    H++  S L A+MTL T GGMA TY   GKLF GPHL AGLG+V + SV  +  PYMQKG  WAR  H  L     GLFGWQA +G+ IV ++L
Sbjct:   17 HPLLMWVVLAIALYALYTGIQVIRTRSADGDAKKALVQGKFNTKHYQIGSLLLALMTLGTLGGMAVTYINNGKLFVGPHLLAGLGMVGMMSVSASLSPYMQKGANWARLTHILLNVTLLGLFGWQAATGIQIVQRIL 153          
The following BLAST results are available for this feature:
BLAST of Ggra5558.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IU832.440e-9565.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1XAG25.570e-6264.74Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NLK01.640e-5764.56Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z3H92.460e-5652.79Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
M2X3C22.330e-5550.75Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S0G8L86.910e-4758.27Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7J7IM361.700e-4551.52Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1UV181.810e-4354.38Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A1E5QJ925.500e-3645.26Uncharacterized protein n=2 Tax=unclassified Deser... [more]
A0A1Q8Z6W65.830e-3648.18Uncharacterized protein n=1 Tax=Leptolyngbya sp. '... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025067Protein of unknown function DUF4079PFAMPF13301DUF4079coord: 106..243
e-value: 3.9E-39
score: 134.1
NoneNo IPR availablePANTHERPTHR34679FAMILY NOT NAMEDcoord: 137..247
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..241
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 177..187
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 134..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 242..249
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 209..219
NoneNo IPR availableTMHMMTMhelixcoord: 154..173
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 188..207
NoneNo IPR availableTMHMMTMhelixcoord: 69..91
NoneNo IPR availableTMHMMTMhelixcoord: 220..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:930137..930886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5558.t1Ggra5558.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 930137..930886 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5558.t1 ID=Ggra5558.t1|Name=Ggra5558.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=250bp
MSATAFVPTTPVHTAQHTLGNAATRFTRLTRVKVAPFARSKATRLPIEAR
LPSETEPLAADDKNWVDVISEAACSLAGVYFALGGIPAAHAVPDALKEAF
KSKPASLAHPVVMWTLLGTCLYTFYLGYQSSLIRKSEPAKRKELVKKKVT
ETHFRTSSSLFAVMTLATFGGMANTYTRTGKLFPGPHLYAGLGLVALFSV
MTAFVPYMQKGKEWARQAHFSLAFVAAGLFGWQAKSGMVIVGKLLGWDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025067DUF4079