Ggra5669.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5669.t1
Unique NameGgra5669.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1304
Homology
BLAST of Ggra5669.t1 vs. uniprot
Match: A0A2V3IVD4 (RNB domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVD4_9FLOR)

HSP 1 Score: 849 bits (2193), Expect = 3.740e-291
Identity = 422/720 (58.61%), Postives = 552/720 (76.67%), Query Frame = 0
Query:    8 QSIDVGSYIHIRSGSKLRLTRALRPDGKRNWMVQDSAGSQFSASPKQILFALGSQAATSLPDDLSDVENLIQTLAEEYEELLELSWEELRSETDPVDIYQICLLIFSNETPLSLLVTHYLLDQDDIFFKSRNIKGTVKYEARSSRNVEEIKVQKLEQARRSERDQHRQLAIQNAYSSCSLDPLRFHFSEEEIQKLLFSLREMAIELGNGKYDANNRHAFIAGNSFSLLGKEARALVQMTMTALSKPIVPLSAFDVLVAWREMSQHENLAILRSGMDKRRTFSATTLESVEQIISNPPVDVDRQRRLDLRHLPSYAVDSADTTEVDDAISFDPESNLIYVHVADPSRYFPCAEDVVLQEAFQRSRTIYLPTEKLTMFPDKLANELFSLTGGSWDGTSLSFSFCVNEDGSVEEQSMRVHPTLTPRPLRLTYEQANEAIEDDANTEHAPLKQLYHLALKRREWREVEGGAINIDTPFSYIGVKDESKEDPEISIGTVQSDTAAWKLVSELMITACTVGAFIAKEANLPLPFRSQEPFDYPEDDVIESIPNGPARAAIVFKNAAASVTSTQPMEHASLGVDYYSQLTSPIRRSLDLIAHFQLKALIRGEEAPYTVDDINSEIGRTQDVGRDARVLENRTNKYWQLEFLRRKGPNVIHRASFVKSIRDSD-RLGLVHFEDYGFQLVSMITPGTKPGAAVGVRISIANPRTGEVRAESVLSSEASS 726
            QSID GSY+H+ SGS+LRLTRALRP+GKR+WMVQD++G++FS   KQILF +G  + T+L +DLS VE+LI+   +E EELLE++WEEL S+  P  +  IC ++F++E PLS+L TH +L  DD++FK+RNIKG+  YEAR+   V+ I+ QKLEQ RR + +  ++  +Q AY + SL+PL+ +FSE EI  LL SLRE+AIELG GK + ++R+AF   N FS L  +A+ALVQ+TM+ALSKP++P SAFDVLVAW++M++HENL ILR+ +D RR F     E+ + ++S+PP D+DR  R DLRHL ++A+DS+DTTE+DDAI+FD ESN +YVHVADPSRYF   E  +L+EA +RS T+YLPTEKLTMFP+KLANELFSLTG  WDGT+LSF F + EDG++ ++S RV PTL  + LRLTYE+A+ A+ D  +  H  L  L  +A +RREWRE+EGGAI I+ PF  + V     + P+I +G V+SDT AW LVSELMITACT GA+ AKEA +P+P+RSQEPFDYP+DD+I++IP+GPARAA+VF+NAA SVTS  P EHASLGVDYY+QLTSPIRRSLDLI HFQLKA IRG+E P++V  I  EI R+Q+VGRDAR+ EN++ +YWQLE+LRR GP   HRA FV+ ++D+D R+G  H EDYGFQ+V  + PG KP A + VR+S  NPR   V+AESVL  +  S
Sbjct:   83 QSIDAGSYLHVLSGSRLRLTRALRPEGKRSWMVQDASGTEFSVPSKQILFVVGPPSETALSEDLSSVESLIEARVDENEELLEVAWEELSSQDGPFSMRDICQVLFTDEAPLSMLSTHVMLVNDDVYFKARNIKGSFVYEARTPEVVKNIQAQKLEQFRRYQLENAKREDLQRAYETRSLEPLKRNFSEIEIDLLLSSLREIAIELGTGKNNIDSRYAFTGENKFSALDMKAKALVQLTMSALSKPVIPSSAFDVLVAWKQMARHENLIILRAELDTRRRFPEQIHEAADALLSHPPEDIDRCERKDLRHLQAFAIDSSDTTEIDDAIAFDSESNCVYVHVADPSRYFEDTESDLLREALRRSATVYLPTEKLTMFPEKLANELFSLTGKRWDGTALSFQFQIAEDGTIVKESTRVQPTLISKALRLTYEEADNALNDPDDENHDALTALQEIAERRREWREMEGGAIMINNPFPSVEVTGAELDVPDIKLGIVKSDTPAWMLVSELMITACTTGAWFAKEAGIPIPYRSQEPFDYPDDDIIDAIPDGPARAAVVFRNAAPSVTSMYPNEHASLGVDYYTQLTSPIRRSLDLITHFQLKAFIRGQELPFSVQQIQGEIARSQEVGRDARLTENKSKRYWQLEYLRRLGPEARHRAIFVRCLKDNDDRVGFAHLEDYGFQVVVSVPPGLKPAAPISVRVSQVNPRMSVVQAESVLHVDEGS 802          
BLAST of Ggra5669.t1 vs. uniprot
Match: R7QAA1 (RNB domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAA1_CHOCR)

HSP 1 Score: 564 bits (1453), Expect = 1.520e-180
Identity = 308/703 (43.81%), Postives = 447/703 (63.58%), Query Frame = 0
Query:   25 RLTRALRPDGKRNWMVQDSAGSQFSASPKQILFALGSQAATS-LPDDLSDVENLIQTLAEEYEELLELSWEELRSE---TDPVDIYQICLLIFSNETPLSLLVTHYLLDQDDIFFKSRNIKGTVKYEARSSRNVEEIKVQKLEQARRSERDQHRQLAIQNAYSSCSLDPLRFHFSEEEIQKLLFSLREMAIELGNGKYDANNRHAFIAGNSFSLLGKEARALVQMTMTALSKPIVPLSAFDVLVAWREMSQHENLAILRSGMDKRRTFSATTLESVEQIISNPPVDVDRQRRLDLRHLPSYAVDSADTTEVDDAISFDPESNLIYVHVADPSRYFPC-AEDVVLQEAFQRSRTIYLPTEKLTMFPDKLANELFSLTGGSWDGTSLSFSFCVNEDGSVEEQSMRVHPTLTPRPLRLTYEQANEAIEDDANT-EHAPLKQLYHLALKRREWREVEGGAINIDTPFSYIGVKDESKEDPEISIGTVQSDTAAWKLVSELMITACTVGAFIAKEANLPLPFRSQEPFDYPEDDVIESIPNGPARAAIVFKNAAASVTSTQPMEHASLGVDYYSQLTSPIRRSLDLIAHFQLKALIRGEEAPYTVDDINSEIGRTQDVGRDARVLENRTNKYWQLEFLRRKGPNVIHRASFVKSIRDSD-RLGLVHFEDYGFQLVSMITPGTKPGAAVGVRISIANPRTGEVRAESVL 720
            R+ RA++PDGKRNW+V D+ G   S + KQI F LG  +      D+L  +++     A +  + L   WE + SE   T   DI  +  L+FS++ PL+   +H L+  D ++FK +NIKGT+ YEAR+            EQ R ++  Q   +A + +   C +D                SL+ MAI++   + D       ++  +FS      + +V+  M+AL K + P++AFD+LV     S+HENLA+L+S +   + +  +    ++ ++ N P D+D   R+DL HLPSYA+DS DT+EVDDAIS+D ++  IYVHVADP+RYF    ED +LQ AF+R+ T+YLPT K TMFP++LA ++FSL G   DG++LSFSFC+ +DGS+ + S+ V  T    P+R TYE+ +  + D A   +HA +  +Y +A +R EWRE+EGGAI I+TPFS + +K    E+PEI +    +DT +W LVSE+MITAC V    A+EA+L +PFR QEPFDYPED+V+E+ PNGP RAAIVF+NAA S   T+ MEHASLG+D Y Q+TSPIRRS DL+AHFQLKA IRGE    +++++  EI R+ DV R+ R+++NRT KYWQLE+LRR GP V +   +V+ +RD D + GLV+FE++GFQ+V+ +    KPG+ + +R+    PR+G  R E+ +
Sbjct:   87 RIGRAVKPDGKRNWIVADANGVTSSVTLKQIAFVLGPLSDFEPFADNLHALDDTCHQKASDNHDWLPEIWEHVTSEHPDTRTTDIDAVTELVFSDQHPLNCYASHLLMSHDKVYFKEKNIKGTILYEARTP-----------EQVRSAQLMQEAVVAKEKSDVECLVD----------------SLKLMAIDIVAMRSDGRMPSDMVS--AFSSFDDRVKEMVKDAMSALGKNVSPVNAFDLLVKLSVYSKHENLALLKSDLPHLQEWDPSVQARMQHLMENIPDDIDMHLRVDLTHLPSYAIDSEDTSEVDDAISWDADTGRIYVHVADPTRYFGGDLEDPILQAAFRRAVTLYLPTAKFTMFPEELATQVFSLDGVDSDGSALSFSFCIEDDGSIRQDSVTVEMTQISTPIRYTYEEVDAILSDTAKEGDHATMHSIYEIAKRRYEWREMEGGAIMINTPFSEVTLKMMDGEEPEILLTKKLTDTRSWILVSEMMITACAVAGDYAREASLDVPFRGQEPFDYPEDEVLETYPNGPVRAAIVFRNAAPSQVDTKAMEHASLGLDAYLQVTSPIRRSCDLVAHFQLKARIRGEAGRLSIEEVRKEIARSGDVTREMRLVDNRTKKYWQLEYLRRMGPRVEYDGVYVRGLRDDDSKRGLVYFEEFGFQMVASVPSTAKPGSKLKLRVEEVEPRSGFSRIEATM 760          
BLAST of Ggra5669.t1 vs. uniprot
Match: uncharacterized ribonuclease sll1290-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D39BD (uncharacterized ribonuclease sll1290-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D39BD)

HSP 1 Score: 466 bits (1198), Expect = 7.470e-146
Identity = 260/618 (42.07%), Postives = 382/618 (61.81%), Query Frame = 0
Query:  103 VDIYQICLLIFSNETPLSLLVTHYLLDQDDIFFKSRNIKGTVKYEARSSRNVEEIKVQKLEQARRSERDQHRQLAIQNAYSSCSLDPLRFHFSEEEIQKLLFSLREMAIELGNG----KYDANNRHAFIAGNSFSLLGKEARALVQMTMTALSKPIVPLSAFDVLVAWREMSQHENLAILRSGMDKRRTFSATTLESVEQIISNPPV-DVDRQRRLDLRHLPSYAVDSADTTEVDDAISFDPESNLIYVHVADPSRYFPCAED-VVLQEAFQRSRTIYLPTEKLTMFPDKLANELFSLTGGSWDGTSLSFSFCVNEDGSVEEQSMRVHPTLTPRPLRLTYEQANEAIEDDANTEHA---PLKQLYHLALKRREWREVEGGAINIDTPFSYIGVKDESKEDPEISIGTVQSDTAAWKLVSELMITACTVGAFIAKEANLPLPFRSQEPFDYPEDDVIESIPNGPARAAIVFKNAAASVTSTQPMEHASLGVDYYSQLTSPIRRSLDLIAHFQLKALIRGEEAPYTVDDINSEIGRTQDVGRDARVLENRTNKYWQLEFLRRKGPNVIHRASFVKSIRDSD-RLGLVHFEDYGFQLVSMITPGTKPGAAVGVRISIANPR 710
            + + +I  L+F + +  S+  +H LL +D +FFK + +KG   +EA+S + V E + Q    AR+ E ++    AI ++  S     LR    E     ++ +L  +A++ G+      YD N  + F      S L + ++A  +  + AL KP+VP SAF+VLVAW   +QHENL + R G+  + +FS   LE   ++  +  V D D   RLDL  L SYA+DS+DTTEVDDA+++D   + ++VHVADP+RYF    D V+  +A  R  T+YLP+EK TMFP  L++  FSL G   DG++LSF F + ++G+++E S+ V P+    P+RLTYE+ +  I   +  E      L+ L+ LA+ R++WR VE GA+ + +PFS I V+D   E+P I+ G   +DTA+WKLVSELMITAC +   I  + ++PLP+R QE FDYP  + +E IP GPAR A +FK+A +S  S+ P+EHASL +D Y Q+TSPIRRS+DLI H+QLKA++RGE  P   + ++ EI +  ++ +  + LENRT KYW LE+LRR G N +H A +V+  RD D RLG+V   + GFQ ++ +  G KPG  V VR S  +PR
Sbjct:    6 LSLEEIADLVFGDSSLSSMYASHVLLSRDRLFFKEKVLKGKPVFEAKSEKLVVEARSQADASARKEEAERAVVQAILDSVISRDPSELRCLVGESLYSTMVAALETIALDYGSAFEESDYDDNPMYGF------SSLDEASKAAARQVLQALGKPVVPSSAFNVLVAWNIFTQHENLLLRRDGLRAKLSFSPNILEKATELTKSEDVSDRDADTRLDLTRLVSYAIDSSDTTEVDDALTWDAVEHKVWVHVADPTRYFSDGWDNVIFSDARNRGTTVYLPSEKFTMFPPDLSSSKFSLGGAHSDGSALSFGFKILDNGALDESSVLVSPSRVSPPIRLTYEEVDNIISSQSGAETQVVRDLEMLFKLAVARQDWR-VEQGALVLPSPFSRISVEDALAEEPCITAGLENTDTASWKLVSELMITACAIAGDIGAKNDIPLPYRGQEGFDYPSAEALEDIPEGPARIAAIFKSARSSEISSAPLEHASLAMDAYVQITSPIRRSVDLIGHYQLKAVLRGESVPLDSEAMDREINKNLEICKATKALENRTTKYWHLEYLRRCGLNAVHDAVYVRPRRDGDERLGVVELCETGFQSIAQLPTGIKPGTVVHVRFSAIDPR 616          
BLAST of Ggra5669.t1 vs. uniprot
Match: A0A1U7IG59 (RNB domain-containing ribonuclease n=2 Tax=Phormidium TaxID=1198 RepID=A0A1U7IG59_9CYAN)

HSP 1 Score: 340 bits (872), Expect = 1.220e-98
Identity = 249/724 (34.39%), Postives = 376/724 (51.93%), Query Frame = 0
Query:   10 IDVGSYIHIRSGSKLRLTRALRPDGKRNWMVQDSAGSQFSASPKQILFALGSQA--ATSLPDDLSDVENLIQTLAEEYEELLELSWEELRSETDPVDIYQICLLIFSNETPLSLLVTHYLLDQDDIFFKSRNIKGTVKYEARSSRNVEEIKVQKLEQARRSERDQHRQLAIQNAYSSCSLDPLRFHFSEEEIQKLLFSLREMAIELGNGKYDANNRHAFIAGNSFSLLGKEA--RALVQMTMTALSKPIVPLSAFDVLVAWREMSQHENLAILRSGMDKRRTFSATTLESVEQIISNPPVDVDRQRRLDLRHLPSYAVDSADTTEVDDAISFD--PESN-LIYVHVADPSRYFPCAEDVVLQEAFQRSRTIYLPTEKLTMFPDKLANELFSLTGGSWDGTSLSFSFCVNEDGSVEEQSMRVHPTLTPRPLRLTYEQANEAIEDDANTEHAPLKQLYHLALKRREWREVEGGAINIDTPFSYIGVKDESKEDPEISIGTVQSDTAAWKLVSELMITACTVGAFIAKEANLPLPFRSQEPFDYPEDDVIESIPNGPARAAIVFKNAAASVTSTQPMEHASLGVDYYSQLTSPIRRSLDLIAHFQLKALIRGEEAPYTVDDINSEIGRTQDVGRDARVLENRTNKYWQLEFLRRKGPNVIHRASFVKSIRDSDRLGLVHFEDYGFQLVSMITPGTKPGAAVGVRISIANPRTGEVRAESVLSSEASS 726
            ++ G  +  R   + RL  A RPDGK NW+V D  G  ++  P+Q+ + +         +P    +VEN +   +      LE++WE L    + V+I  + +L+FS +T       +YLL +D I+FK +  +    YE RS+  V EIK Q +E A + +R+      +       + +PL  + S  E     FS             +   R+   A   + +LG+EA  R+L Q T+ AL  P  P +AFD+LV     S HENL + RS +     FS   LE  +  I  PP D D  R LDL HL  Y +D   T E+DD +S++  P+     ++H+ADPSR+    +++ L EA +RS T+YLPT  + MFP +LA    SL  G    T+LSF   ++E G V+E S  +HPT+     RLTYE  +E + D A      L  +   A  R+ WR+ +G AI I+ P   I V     ED EI I  V  D+ +  +V+E+MI    V A   +E  L LPFR Q   + P ++ +  +P GPARA  + +    S  S  P  HASLG++ YSQ+TSPIRR  DL+AHFQ+KA +RG+  P++ D++   +     V ++A ++E +T++YW LE+LRR  P  + +A  ++ +R+ DRLGL+  ED G +L        + G  + VR+S  +PR   ++ E      A +
Sbjct:    1 MEKGRLVEFRLHGERRLAVAERPDGKTNWIVVDDRGQSYNIHPRQVTYEVNGTTYQPKEIPLFRQEVENYLDPSS------LEVAWEILAETGESVNIPGMAMLLFSEQTQAQCYAAYYLLSEDKIYFKQKGDR----YEPRSATLVGEIKHQ-IEVAEQRKRESEEFFTL--VQQVIAGNPLESYNSVREA----FS-------------ETRYRNRIDALERYVILGEEATGRSLAQETLAALELPTNPQAAFDLLVRLGLWSYHENLFLRRSQIPVH--FSTKVLEVAQLRIDTPPPDPDSDR-LDLTHLKVYTIDDESTKEIDDGLSWEKLPDGRERFWIHIADPSRWVMPGDELDL-EARRRSTTLYLPTGMIPMFPTELATGPMSLVQGKIC-TALSFGVILDETGGVQEYS--IHPTIIKPTYRLTYEDVDEML-DLAVPAEPELTAIASSAQLRQAWRQSQG-AITINLPEGLIKV-----EDDEIHI-QVLDDSQSRMMVAEMMILTGEVAARYGQEHQLALPFRGQPQPELPSEEELLLLPAGPARACAMRRCMPRSEISVTPARHASLGLNTYSQVTSPIRRYSDLLAHFQIKAHLRGDPLPFSADELREVMMSVSMVTQEASLVERQTHRYWALEYLRRN-PGQVWQALLLRWLREDDRLGLILLEDLGLELPMGFRRSIQLGDRLDVRVSYVDPRQDVIKFEETSDQTAQA 678          
BLAST of Ggra5669.t1 vs. uniprot
Match: ribonuclease R n=1 Tax=unclassified Planktothrix TaxID=2648599 RepID=UPI0018F0016F (ribonuclease R n=1 Tax=unclassified Planktothrix TaxID=2648599 RepID=UPI0018F0016F)

HSP 1 Score: 335 bits (860), Expect = 4.040e-97
Identity = 240/718 (33.43%), Postives = 382/718 (53.20%), Query Frame = 0
Query:   16 IHIRSGSKLRLTRALRPDGKRNWMVQDSAGSQFSASPKQILFALGSQA--ATSLPDDLSDVENLIQTLAEEYEELLELSWEELRSETDPVDIYQICLLIFSNETPLSLLVTHYLLDQDDIFFKSRNIKGTVKYEARSSRNVEEIKVQKLEQARRSERDQHRQLAIQNAYSSCSLDPLRFHFSEEEIQKLLFSLREMAIELGNGKYDANNRHAFIAGNSFSLLGKEA--RALVQMTMTALSKPIVPLSAFDVLVAWREMSQHENLAILRSGMDKRRTFSATTLESVEQIISNPPVDVDRQRRLDLRHLPSYAVDSADTTEVDDAISFDPESN---LIYVHVADPSRYFPCAEDVVLQEAFQRSRTIYLPTEKLTMFPDKLANELFSLTGGSWDGTSLSFSFCVNEDGSVEEQSMRVHPTLTPRPLRLTYEQANEAIEDDANTEHAPLKQLYHLALKRREWREVEGGAINIDTPFSYIGVKDESKEDPEISIGTVQSDTAAWKLVSELMITACTVGAFIAKEANLPLPFRSQEPFDYPEDDVIESIPNGPARAAIVFKNAAASVTSTQPMEHASLGVDYYSQLTSPIRRSLDLIAHFQLKALIRGEEAPYTVDDINSEIGRTQDVGRDARVLENRTNKYWQLEFLRRKGPNVIHRASFVKSIRDSDRLGLVHFEDYGFQLVSMITPGTKPGAAVGVRISIANPRTGEVRAESVLSSEASS 726
            I +R   + RLT A RP+GK  W+VQD  G  ++ +P+QI + +  Q+     +P    +VE  +   +      LE++WE L  +   V + ++ +L+FS ++       +YLL +D ++FK +  +    YE RS   VEE+K Q L+ A + +R+                       SEE + ++  +L    +E     + +++R    A   F+ LG+EA  R++ Q T+ AL +   P +AFD+LV     S HENL + RS +     F+   LE  +Q I  PP D D  R LDL HL  Y VD   T E+DD +S +  ++    ++VH+ADP+R+    +++ L EA +RS T+YLPT  + MFP  LA    SL  G    T+LSF   ++EDG+V+E S  +H ++     RLTYE  +E +E     E   L  +  LA +R +WR  +G AI I  P   I V     ED EI I  ++ D+A+ ++V+E+MI A  V A   +   +PLPFRSQ   + P ++ +  +P G  RAA + +    S  S  P  HA LG+  Y+Q+TSPIRR  DL+ HFQ+KA +RGE+ P++ +++   +     V ++A ++E +T++YW LE+LRR    V  +A  ++ +R+ DRLGL+  ED G +L  +       G  + VR++  +PR   ++ +  +   A +
Sbjct:    2 IEVRLHGERRLTVAERPEGKTKWVVQDERGQSYTVNPQQISYEVTGQSYQPKDIPKFRQEVELYLDPSS------LEIAWEILVEDGTSVSVGEMAMLLFSEQSASVCYAAYYLLSEDKLYFKQKGDR----YEPRSRNLVEELKHQ-LQVAGQRKRE-----------------------SEEFLVRVQQALSGEPVE-----WQSSDRTRLEALEKFASLGEEASGRSVAQETLVALERTNTPQAAFDLLVQMGLWSTHENLFLRRSQIPVN--FATKVLEVAQQRIEFPPPDADTNR-LDLTHLKVYTVDDESTREIDDGLSCETMADGRKKLWVHIADPTRWVMPGDELDL-EARRRSTTLYLPTGMIPMFPPDLATGPMSLVQGKIC-TALSFGIVLDEDGAVQEYS--IHASIIKPTYRLTYEDVDEMLELAVPAE-PELAAIASLAQRREKWRRSQG-AIGIHLPEGLIKV-----EDDEIYIHVLE-DSASRQMVAEMMIVAGEVAARYGQAHQIPLPFRSQPQPELPSEEELLQLPAGWVRAAAMRRCMPRSEMSIIPARHAGLGLQIYTQVTSPIRRYTDLLTHFQIKAHLRGEQLPFSAEEMKEVMMSVTAVSQEASLVERQTHRYWALEYLRRNSDRV-WQALLLRWLREDDRLGLILLEDLGLELPMVFRRSVYLGDRMEVRVTHVDPRQDAIKFQETVDRAAQT 664          
BLAST of Ggra5669.t1 vs. uniprot
Match: A0A0P8BQU1 (Exoribonuclease II n=5 Tax=Oscillatoriales TaxID=1150 RepID=A0A0P8BQU1_9CYAN)

HSP 1 Score: 334 bits (857), Expect = 1.110e-96
Identity = 244/720 (33.89%), Postives = 374/720 (51.94%), Query Frame = 0
Query:   10 IDVGSYIHIRSGSKLRLTRALRPDGKRNWMVQDSAGSQFSASPKQILFALGSQAATSLPDDLSDVENLIQTLAEEYEELLELSWEELRSETDPVDIYQICLLIFSNETPLSLLVTHYLLDQDDIFFKSRNIKGTVKYEARSSRNVEEIKVQKLEQARRSERDQHRQLAIQNAYSSCSLDPLRFHFSEEEIQKLLFSLREMAIELGNGKYDANNRHAFIAGNSFSLLGKEA--RALVQMTMTALSKPIVPLSAFDVLVAWREMSQHENLAILRSGMDKRRTFSATTLESVEQIISNPPVDVDRQRRLDLRHLPSYAVDSADTTEVDDAIS---FDPESNLIYVHVADPSRYFPCAEDVVLQEAFQRSRTIYLPTEKLTMFPDKLANELFSLTGGSWDGTSLSFSFCVNEDGSVEEQSMRVHPTLTPRPLRLTYEQANEAIEDDANTEHAPLKQLYHLALKRREWREVEGGAINIDTPFSYIGVKDESKEDPEISIGTVQSDTAAWKLVSELMITACTVGAFIAKEANLPLPFRSQEPFDYPEDDVIESIPNGPARAAIVFKNAAASVTSTQPMEHASLGVDYYSQLTSPIRRSLDLIAHFQLKALIRGEEAPYTVDDINSEIGRTQDVGRDARVLENRTNKYWQLEFLRRKGPNVIHRASFVKSIRDSDRLGLVHFEDYGFQLVSMITPGTKPGAAVGVRISIANPRTGEVRAESVLSSEA 724
            ++ G+ I  R   + RL    RP+GK+NW+V D  G   + SPKQ+ + L  Q+    P DL   +  +    +     LE++WE L  + + V   ++ LL+FS+ TP      H LL  D I+FK +  +    YE R +  V E+K Q   +A R           Q A+++         F E   Q L  +  +         +D+++R    A   ++ LG EA  R+     ++AL++P+ P  AFDVLV     S HENL + R+ +     FS+  L+  ++ ++N P D D   RLDL HL  Y +D A T E+DD +S    D +   ++VH+ADP+R+    +++ L EA +R  T+YLPT    M P +LA    SL  G     +LSFS  +N DGSV E S  +HP+L     RLTY+  +E +E     E   +  +   A  R  WR+ +G +I ID P S I V ++     E++I  V  ++AA +LV+E+MI A  V A  A+E NL +PFR Q   + P ++ +  +P GPARA  + K    S  S  P  HASLG+D Y+Q+TSPIRR  DL+ HFQLKA +RG+  P++ + +   +       ++A ++E +T +YW +E+LRR       +A  ++ IR  D LG +  E+ G + V       +PG    VR+S A+PR   ++ + V+ S A
Sbjct:    1 MEKGNLIEFRLQGERRLAVLDRPEGKKNWVVIDEQGQSRTLSPKQMSYCLAGQSYQ--PSDLGAFQAEVSPYLDPSS--LEVAWELLSEDGESVAPEELALLLFSDSTPAQCYAAHRLLCDDKIYFKQKGDR----YEPRPASQVAELKHQLEAEALR-----------QQAWTT---------FLERVAQALAGTPMD---------WDSSDRSHLDALERYATLGDEAPGRSAAHDVLSALNRPLTPQGAFDVLVDLGLWSPHENLFLRRTQIPTH--FSSKVLDVAQRCLTNFPPDTD-PNRLDLTHLKLYTIDDASTREIDDGLSVEFLDGDRQRLWVHIADPTRWLTPGDELDL-EARRRCTTVYLPTGMTPMLPPELATGPMSLNAGQ-TCCALSFSVILNPDGSVNEFS--IHPSLVKPTYRLTYDDVDEMLELGLRAE-PEIAAIAEWAKTRHRWRQSQG-SIFIDMPESAIKVNND-----EVTI-EVLDNSAARQLVAEMMILAGEVAARYAQEHNLAIPFRHQSQPELPPEEELLQLPAGPARACAIRKCMPRSEMSVFPNRHASLGLDTYTQVTSPIRRYTDLLTHFQLKAHLRGDSQPFSSEQVQQLMMSVMVSAKEAVLVERQTCRYWAIEYLRRHQQET-WQALMLRWIRPDDNLGSLLLEEIGIEFVWRFPRPMQPGERFQVRVSYADPREDSIQFQEVVDSPA 667          
BLAST of Ggra5669.t1 vs. uniprot
Match: A0A8J7ETG2 (VacB/RNase II family 3'-5' exoribonuclease n=1 Tax=Oculatella sp. LEGE 06141 TaxID=1828648 RepID=A0A8J7ETG2_9CYAN)

HSP 1 Score: 333 bits (853), Expect = 4.810e-96
Identity = 238/708 (33.62%), Postives = 368/708 (51.98%), Query Frame = 0
Query:   10 IDVGSYIHIRSGSKLRLTRALRPDGKRNWMVQDSAGSQFSASPKQILFALGSQAAT--SLPDDLSDVENLIQTLAEEYEELLELSWEELRSETDPVDIYQICLLIFSNETPLSLLVTHYLLDQDDIFFKSRNIKGTVKYEARSSRNVEEIKVQKLEQARRSERDQHRQLAIQNAYSSCSLDPLRFHFSEEEIQKLLFSLREMAIELGNGKYDANNRHAFIAGNSFSLLGKEA--RALVQMTMTALSKPIVPLSAFDVLVAWREMSQHENLAILRSGMDKRRTFSATTLESVEQIISNPPVDVDRQRRLDLRHLPSYAVDSADTTEVDDAISFDPESN---LIYVHVADPSRYFPCAEDVVLQEAFQRSRTIYLPTEKLTMFPDKLANELFSLTGGSWDGTSLSFSFCVNEDGSVEEQSMRVHPTLTPRPLRLTYEQANEAIEDDANTEHAPLKQLYHLALKRREWREVEGGAINIDTPFSYIGVKDESKEDPEISIGTVQSDTAAWKLVSELMITACTVGAFIAKEANLPLPFRSQEPFDYPEDDVIESIPNGPARAAIVFKNAAASVTSTQPMEHASLGVDYYSQLTSPIRRSLDLIAHFQLKALIRGEEAPYTVDDINSEIGRTQDVGRDARVLENRTNKYWQLEFLRRKGPNVIHRASFVKSIRDSDRLGLVHFEDYGFQLVSMITPGTKPGAAVGVRISIANPR 710
            ++ G+ +  R     RL  A RP+GK++W+V D  G   +  P+Q+ + +  Q      +   L +V++ +   +      LE++WE L  +++PVD   + LL+FS+++P      H LL +D  +FK +  +    YE RS+  V E+K Q   +A+R +  Q     +Q A +    +PL                          ++ +++R    A   F+ LG+E   RA    T++AL +P    +AF +LV  +  S HENL + RS +  +  FS+  LE     ++ PP D D   RLDL HL  Y +D   T E+DD +S +   +    +++H+ADP+R+    +D+ L EA +R  T+YLPT  + MFP +LA    SL  G    ++LSF   + E G+V++ S  VH +L     RLTYE  +E +E     E   L  L   A +R  WR  +G AI+I  P S I V+D+     EI+I  V  D+++ +LV+ELMI A  V     +   LP P+R Q   + P DD +  +P GP R   + +    S  S  P  HASLG+D Y+Q+TSPIRR  DL+AHFQLKA +RGE  P++  +I   +        +A ++E +TN+YW LE+LRR      H A  ++ +R+ + LGLV  ED G +L    T   +PG  + VR++ A+PR
Sbjct:    1 MEKGTLVEFRLHGDRRLAVAERPEGKKHWIVVDERGQSHTLHPRQVTYEVKGQGYKPGGIAAFLQEVQSYLDPSS------LEVAWELLVEDSEPVDPEAMALLLFSDQSPPLCYAAHCLLSEDKFYFKQKGDR----YEPRSAAQVLELKHQSDVEAQRQQEWQGFLSRLQQALAG---EPL--------------------------EWQSSDRSRLEALERFAALGEETNHRAPALETLSALGRPETAQAAFQLLVDLKVWSLHENLFLRRSQVPMQ--FSSRVLEMAHSCLATPPPDPD-PNRLDLTHLKLYTIDDESTCEIDDGLSVETLEDGRQRLWIHIADPTRWLVPGDDLDL-EARRRCTTLYLPTGMIPMFPPELATGPMSLKQGQVC-SALSFGVVLTEAGAVDDFS--VHASLVKPTYRLTYEDVDEILELGVQAE-PELAALDTWAKRRVSWRRSQG-AISIHMPESSIKVRDD-----EITI-QVLDDSSSRRLVAELMILAGEVAGRYGQAHELPFPYRGQSQPELPSDDELMLLPAGPVRYCAIRRCMPRSEISITPTRHASLGLDTYTQVTSPIRRYADLLAHFQLKAHLRGEPLPFSASEIKELLQTVSSTAYEATLVERQTNRYWGLEYLRRHAEQPWH-ALMLRWLREHENLGLVLLEDLGLELAMRFTRPIEPGDRLDVRVTYADPR 653          
BLAST of Ggra5669.t1 vs. uniprot
Match: A0A8J6R236 (VacB/RNase II family 3'-5' exoribonuclease n=9 Tax=unclassified Trichocoleus TaxID=2628910 RepID=A0A8J6R236_9CYAN)

HSP 1 Score: 331 bits (849), Expect = 1.600e-95
Identity = 232/722 (32.13%), Postives = 386/722 (53.46%), Query Frame = 0
Query:   10 IDVGSYIHIRSGSKLRLTRALRPDGKRNWMVQDSAGSQFSASPKQILFALGSQA--ATSLPDDLSDVENLIQTLAEEYEELLELSWEELRSETDPVDIYQICLLIFSNETPLSLLVTHYLLDQDDIFFKSRNIKGTVKYEARSSRNVEEIKVQKLEQARRSERDQHRQLAIQNAYSSCSLDPLRFHFSEEEIQKLLFSLREMAIELGNGKYDANNRHAFIAGNSFSLLGKEA--RALVQMTMTALSKPIVPLSAFDVLVAWREMSQHENLAILRSGMDKRRTFSATTLESVEQIISNPPVDVDRQRRLDLRHLPSYAVDSADTTEVDDAISFD---PESNLIYVHVADPSRYFPCAEDVVLQEAFQRSRTIYLPTEKLTMFPDKLANELFSLTGGSWDGTSLSFSFCVNEDGSVEEQSMRVHPTLTPRPLRLTYEQANEAIEDDANTEHAPLKQLYHLALKRREWREVEGGAINIDTPFSYIGVKDESKEDPEISIGTVQSDTAAWKLVSELMITACTVGAFIAKEANLPLPFRSQEPFDYPEDDVIESIPNGPARAAIVFKNAAASVTSTQPMEHASLGVDYYSQLTSPIRRSLDLIAHFQLKALIRGEEAPYTVDDINSEIGRTQDVGRDARVLENRTNKYWQLEFLRRKGPNVIHRASFVKSIRDSDRLGLVHFEDYGFQLVSMITPGTKPGAAVGVRISIANPRTGEVRAESVLSSEA 724
            ++ G+ +  R  S  RL    RP+GK++W+V D  G  ++  P+Q+ + +  Q+   + +P  L +VE  +   +      LE++WE L  +++ VD   + LL+FS+++P      HYLL +D ++FK +       YE RS+  V E+K Q L  A + +R+                        +E + ++  +L + A+E  N     ++R    A   F+ LG+EA  R     T+ AL +P  P + F +LV     S HENL + RS +  +  FS   LE  ++ + +PP D+D + RLDL  L  Y +D   T E+DD +S +        +++H+ADP+R+    +D+ L EA +RS TIYLPT  + MFP +LA    SL  G     +LSF   ++E G++ +   ++  +L     RLTYE  +E +E     E + L+ +   A +R+ WR  +G AI+I+ P S I V D+     EI+I  ++   +  +LV+E+MI A  V A   +  NL +PFR+Q   + P ++ +  +P GP R+  + +    S  S  P  HASLG+D Y+Q+TSPIRR  DL+AHFQ+KA +RG   P++V+++   +     V ++A  +E +TN+YW LE+LRR   + + +A  ++ +R+ + L L+  ED G +L   +T    PG  + V+++ A+PR   ++ + +L  EA
Sbjct:    1 MEKGTLVEFRLHSDRRLAVLERPEGKKHWIVLDERGQSYTLHPRQVTYTVTGQSYKPSEIPQFLKEVEAYLDPSS------LEVAWELLVEDSETVDPAGMALLLFSDQSPPLCYAAHYLLSEDKLYFKQKGDH----YEPRSATQVAELKHQ-LTVAGQKQREW-----------------------QEFLTRIQQALTDQAVEWQN-----SDRGRLEALERFATLGEEASHRTPALETLAALGRPETPQAGFQLLVDLGLWSVHENLFVRRSQIPTQ--FSTKVLEVAKRCLESPPPDLDVEGRLDLTGLKVYTIDDESTREIDDGVSLEYLEDGRQKLWIHIADPTRWIVPGDDLDL-EARRRSTTIYLPTGIIPMFPPELATGPMSLIQGKIC-YALSFGVILDESGAIADY--QIQTSLIKPTYRLTYEDVDEMLELGVLGE-SELQAIASWAKRRQTWRHSQG-AISINMPESSIKVHDD-----EITIEVLEVSQSR-QLVAEMMILAGEVAARYGQAHNLAIPFRNQTQPELPPEEELLQLPAGPVRSCAIRRCMPRSEMSITPARHASLGLDTYTQVTSPIRRYTDLLAHFQIKAHLRGTPLPFSVEEMKELLMSVGAVAQEATSVERQTNRYWGLEYLRRH-THEVWQALVLRWLREHENLALILLEDLGLELAIRLTKAASPGDRMEVKVTYADPRQDTIQFQQLLDREA 668          
BLAST of Ggra5669.t1 vs. uniprot
Match: ribonuclease R n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F98AEC (ribonuclease R n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F98AEC)

HSP 1 Score: 326 bits (835), Expect = 1.340e-93
Identity = 233/721 (32.32%), Postives = 378/721 (52.43%), Query Frame = 0
Query:   10 IDVGSYIHIRSGSKLRLTRALRPDGKRNWMVQDSAGSQFSASPKQILFALGSQAATSLPDDLSDVENLIQTLAEEYEELLELSWEELRSETDPVDIYQICLLIFSNETPLSLLVTHYLLDQDDIFFKSRNIKGTVKYEARSSRNVEEIKVQKLEQARRSERDQHRQLAIQNAYSSCSLDPLRFHFSEEEIQKLLFSLREMAIELGNGKYDANNRHAFIAGNSFSLLGKEARALVQMTMTA-LSKPIVPLSAFDVLVAWREMSQHENLAILRSGMDKRRTFSATTLESVEQIISNPPVDVDRQRRLDLRHLPSYAVDSADTTEVDDAISFD---PESNLIYVHVADPSRY-FPCAEDVVLQEAFQRSRTIYLPTEKLTMFPDKLANELFSLTGGSWDGTSLSFSFCVNEDGSVEEQSMRVHPTLTPRPLRLTYEQANEAIEDDANTEHAPLKQLYHLALKRREWREVEGGAINIDTPFSYIGVKDESKEDPEISIGTVQSDTAAWKLVSELMITACTVGAFIAKEANLPLPFRSQEPFDYPEDDVIESIPNGPARAAIVFKNAAASVTSTQPMEHASLGVDYYSQLTSPIRRSLDLIAHFQLKALIRGEEAPYTVDDINSEIGRTQDVGRDARVLENRTNKYWQLEFLRRKGPNVIHRASFVKSIRDSDRLGLVHFEDYGFQLVSMITPGTKPGAAVGVRISIANPRTGEVRAESVLSSEAS 725
            ++ G+ I  R     RL    RP+GK++W+V D  G   +  P+Q+ + +     T  P+D+   +  ++   +     LE++WE L S+T  +   ++  L+FS++ P      +YLL +D ++FK    KG  +YE RS+  V ++K Q+             ++AIQ                ++E+++ L  +R+ A+E  + ++ A++R    A    + +G+E        + A L +P    +AF +LV     S HENL + RS +  +  F A  LE  +Q + +P  D DR R LDL HL  Y +D   T E+DD +S +     +  I+VH+ADPSR+ FP  E  V  EA +RS T+YLPT  + MFP+ LA    SL  G  +  +LSF   ++ DG++ + +  + P+      RLTYE  +E ++     E   L  +   A  R  WR+ +G AI+I  P   I V D    D  ISI  ++ D+ A + V+E+MI    V A   ++  L +P+R Q+  + P ++ +  +P G  R++ + +    S TS  P  HASLG+D Y+Q+TSPIRR  DL+AHFQLKA +RGEE P++ + +   +       ++A  +E +TN+YW LE+LRR+G  V  +A  ++ +R  D LG +  E+ G +L    T   +PG  + VR++ A+PR   VR +  L  +A+
Sbjct:    1 MEKGNLIEFRQDGDRRLAVVERPEGKKHWIVTDERGQSHTVHPRQVTYVVPGGDYT--PEDIPSFQQQVEAYWDPSS--LEVAWEFLDSDTGTIAPEELSELLFSDQQPAQCYAAYYLLSEDKLYFKQ---KGNNRYEPRSATQVADLKHQQ-------------EVAIQK---------------QKELEEFLERVRQ-ALEGESVEWTASDRPRLEALEKLAAVGEEPSGRTARDILAILERPETSEAAFQLLVDLGLWSPHENLFLRRSQIPTQ--FPAKVLEVAQQYLDSPLADRDRNR-LDLTHLKVYTIDDESTQEIDDGVSIEYLEDGTERIWVHIADPSRWIFPGDELDV--EARRRSTTLYLPTGMIPMFPEALATGPMSLVQGK-ECPALSFGVILDADGAIADYT--IAPSTIVPTYRLTYEDVDEMLDLGVQAEPEILA-IGKWAEIRHSWRQKQG-AISISMPECSIKVSD----DDNISIQVIE-DSPARRAVAEMMILTGEVAACYGEQNQLAIPYRQQQQPELPPEEELMQLPAGAVRSSAMRRCMPRSETSLTPGRHASLGLDRYAQVTSPIRRYSDLLAHFQLKAHLRGEEPPFSPEQVQEIVASVSAAAQEATQVERQTNRYWGLEYLRRQGDTV-WQALMLRWLRPDDNLGAILLEELGLELPMRFTRSIQPGDRLEVRVTYADPRQEMVRFQEALVQQAA 669          
BLAST of Ggra5669.t1 vs. uniprot
Match: ribonuclease R n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI00047719C4 (ribonuclease R n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI00047719C4)

HSP 1 Score: 325 bits (834), Expect = 1.900e-93
Identity = 233/722 (32.27%), Postives = 378/722 (52.35%), Query Frame = 0
Query:   10 IDVGSYIHIRSGSKLRLTRALRPDGKRNWMVQDSAGSQFSASPKQILFAL--GSQAATSLPDDLSDVENLIQTLAEEYEELLELSWEELRSETDPVDIYQICLLIFSNETPLSLLVTHYLLDQDDIFFKSRNIKGTVKYEARSSRNVEEIKVQKLEQARRSERDQHRQLAIQNAYSSCSLDPLRFHFSEEEIQKLLFSLREMAIELGNGKYDANNRHAFIAGNSFSLLGKEA--RALVQMTMTALSKPIVPLSAFDVLVAWREMSQHENLAILRSGMDKRRTFSATTLESVEQIISNPPVDVDRQRRLDLRHLPSYAVDSADTTEVDDAISFD--PESNL-IYVHVADPSRYFPCAEDVVLQEAFQRSRTIYLPTEKLTMFPDKLANELFSLTGGSWDGTSLSFSFCVNEDGSVEEQSMRVHPTLTPRPLRLTYEQANEAIEDDANTEHAPLKQLYHLALKRREWREVEGGAINIDTPFSYIGVKDESKEDPEISIGTVQSDTAAWKLVSELMITACTVGAFIAKEANLPLPFRSQEPFDYPEDDVIESIPNGPARAAIVFKNAAASVTSTQPMEHASLGVDYYSQLTSPIRRSLDLIAHFQLKALIRGEEAPYTVDDINSEIGRTQDVGRDARVLENRTNKYWQLEFLRRKGPNVIHRASFVKSIRDSDRLGLVHFEDYGFQLVSMITPGTKPGAAVGVRISIANPRTGEVRAESVLSSEA 724
            +D G+ I  R     RL  A RPDGK+NW+V D      S  PKQI + +  G+   + +P    + +  +   +      LE++WE L  E + V+  Q+  L+FS ++P      + LL +D ++FK +  +    YE RS+  V E+K Q   Q    +R Q  Q  +       S +P+ +                  +     + DA  R        F+ LG+EA  RA    T+ AL +P  P  AF +L      ++HENL + RS +  +  FS   LE  ++ +++ P D D   RLDL HL  Y +D   T E+DD +S +  P+    ++VH+ADP+R     +++ L EA +R  T+YLPT  + MFP +LA    SL  G     +LSF+  ++E G V+E +  +HP+      RLTYE  +E +    + E   +  L   A +R++WR +  GAI+I  P + I V+ +     E+ +  ++ D+ + +LV+E+MI A  VGA   +  +LPLPFR+Q   + P D+ +  +P GPARA  + +    S  ST P  HASLG+D Y+Q+TSPIRR  DL+AHFQLKA +RG+  P++  ++   +     +  +A ++E +TN+YW LEFLRR   N + +A  ++ +R+ + LGLV  E+ G +L        +PG  + ++++ ++PR+  +  + +++  A
Sbjct:    1 MDKGTLIEFRWHGDRRLAVAERPDGKKNWIVIDENNQSHSIPPKQISYEVAGGTYKPSDIPKFRQEADQYLDPSS------LEVAWEFLAEEGESVEPAQMAQLLFSEQSPAQCYAAYLLLCEDKLYFKQKGER----YEPRSAAMVAELKHQ---QEVERQRQQEWQEFLGRVGQRISGEPVEW------------------LNTDQSRIDALER--------FAALGEEANHRAPAIETLAALKRPETPQGAFQLLADLGVWTEHENLFLRRSQIPIQ--FSTKVLEVAQRSLNSTPPDPD-SNRLDLTHLKVYTIDDESTQEIDDGLSLEYLPDGRQRVWVHIADPTRLLSPGDELDL-EARRRCTTLYLPTGIIPMFPPELATGPMSLVQGRLC-CALSFAIILDETGGVQEYT--IHPSTIKPTYRLTYEDVDEMLLLGISAE-PEISALAEWAKRRQQWR-LSQGAISISMPEAVIKVRGD-----EVQVQLME-DSRSRQLVAEMMILAGEVGARYGQTHSLPLPFRNQPQPELPSDEELLQLPAGPARACAIRRCMPKSEMSTMPARHASLGLDTYAQVTSPIRRYTDLLAHFQLKAHLRGDPLPFSAQELLDVMLSIASIVSEASLVERQTNRYWALEFLRRHS-NEVWQALMLRWLREDENLGLVLLEELGLELPMRFRRSVQPGERLELKVTHSDPRSDIIHFQEMVAQAA 667          
The following BLAST results are available for this feature:
BLAST of Ggra5669.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVD43.740e-29158.61RNB domain-containing protein n=1 Tax=Gracilariops... [more]
R7QAA11.520e-18043.81RNB domain-containing protein n=1 Tax=Chondrus cri... [more]
uncharacterized ribonuclease sll1290-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D39BD7.470e-14642.07uncharacterized ribonuclease sll1290-like n=1 Tax=... [more]
A0A1U7IG591.220e-9834.39RNB domain-containing ribonuclease n=2 Tax=Phormid... [more]
ribonuclease R n=1 Tax=unclassified Planktothrix TaxID=2648599 RepID=UPI0018F0016F4.040e-9733.43ribonuclease R n=1 Tax=unclassified Planktothrix T... [more]
A0A0P8BQU11.110e-9633.89Exoribonuclease II n=5 Tax=Oscillatoriales TaxID=1... [more]
A0A8J7ETG24.810e-9633.62VacB/RNase II family 3'-5' exoribonuclease n=1 Tax... [more]
A0A8J6R2361.600e-9532.13VacB/RNase II family 3'-5' exoribonuclease n=9 Tax... [more]
ribonuclease R n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F98AEC1.340e-9332.32ribonuclease R n=1 Tax=Geitlerinema sp. PCC 9228 T... [more]
ribonuclease R n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI00047719C41.900e-9332.27ribonuclease R n=1 Tax=Oscillatoria sp. PCC 10802 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 782..802
NoneNo IPR availableCOILSCoilCoilcoord: 152..179
NoneNo IPR availableCOILSCoilCoilcoord: 71..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 971..1009
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1268..1303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 961..1055
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 22..708
NoneNo IPR availablePANTHERPTHR23355:SF42EXORIBONUCLEASE II, MITOCHONDRIALcoord: 22..708
IPR001900Ribonuclease II/RSMARTSM00955RNB_2coord: 312..611
e-value: 1.1E-50
score: 184.4
IPR001900Ribonuclease II/RPFAMPF00773RNBcoord: 312..610
e-value: 8.2E-49
score: 166.7
IPR038664H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domainGENE3D2.40.10.230Probable tRNA pseudouridine synthase domaincoord: 806..938
e-value: 8.6E-25
score: 89.0
IPR007504H/ACA ribonucleoprotein complex, subunit Gar1/Naf1PFAMPF04410Gar1coord: 881..944
e-value: 2.9E-13
score: 49.5
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 261..653
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 883..935

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000842_piloncontigtig00000842_pilon:1302881..1308218 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5669.t1Ggra5669.t1Gracilaria gracilis GNS1m malemRNAtig00000842_pilon 1302881..1308218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5669.t1 ID=Ggra5669.t1|Name=Ggra5669.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1304bp
MTTVANLQSIDVGSYIHIRSGSKLRLTRALRPDGKRNWMVQDSAGSQFSA
SPKQILFALGSQAATSLPDDLSDVENLIQTLAEEYEELLELSWEELRSET
DPVDIYQICLLIFSNETPLSLLVTHYLLDQDDIFFKSRNIKGTVKYEARS
SRNVEEIKVQKLEQARRSERDQHRQLAIQNAYSSCSLDPLRFHFSEEEIQ
KLLFSLREMAIELGNGKYDANNRHAFIAGNSFSLLGKEARALVQMTMTAL
SKPIVPLSAFDVLVAWREMSQHENLAILRSGMDKRRTFSATTLESVEQII
SNPPVDVDRQRRLDLRHLPSYAVDSADTTEVDDAISFDPESNLIYVHVAD
PSRYFPCAEDVVLQEAFQRSRTIYLPTEKLTMFPDKLANELFSLTGGSWD
GTSLSFSFCVNEDGSVEEQSMRVHPTLTPRPLRLTYEQANEAIEDDANTE
HAPLKQLYHLALKRREWREVEGGAINIDTPFSYIGVKDESKEDPEISIGT
VQSDTAAWKLVSELMITACTVGAFIAKEANLPLPFRSQEPFDYPEDDVIE
SIPNGPARAAIVFKNAAASVTSTQPMEHASLGVDYYSQLTSPIRRSLDLI
AHFQLKALIRGEEAPYTVDDINSEIGRTQDVGRDARVLENRTNKYWQLEF
LRRKGPNVIHRASFVKSIRDSDRLGLVHFEDYGFQLVSMITPGTKPGAAV
GVRISIANPRTGEVRAESVLSSEASSWEAIGCFAYVFVLSRAVAMMVEIK
SRQDCEEKRSTALEILDDIFAKSTRTPIHDLIEGLLNQVTELARIVQESK
AEDDGKHLRSKNEVDPENVPVPTPTIVIREEDEIVPVGKIVSAMESVVVV
STADWRPNEEAKTVHGTHPKTSPLGTNLNSVSALDHGSALCFGDRRFLGV
VDETFGPVECPFYVVRFNTVKERDATGAKEGRMVYLVKQKSKWVRGSDVL
SKGYDTSNWDDEECNGPVEFSDDEDEKAAKQAQRRARTQRRENGMDNANE
QKRRRLSTSYPAREMSNPAEQHVRTVRRGSQRGRLGPRYGRNPNAEHKNG
PRDTARYASNHATAPVRNTAMFGNQLQGESSAALGMHGMDPVASSEVYAR
AGYSRSHSVPNPSGVYSGSHPNGAVPPAPNGLGQQFYHHHGLSQMVSPVH
NPFAFTASGLPGALPGANVGVPHQSRAQGHYVNHGVNSSQHQYHGAPTPY
WFAGMSHQMYPQTNTAELRQNNSFYAGPMDNQSRTFYGGPVPQQLRYEEA
NHQVRPPSMSPYSPVGFASYASGAGRPMHMNVGPSPEQHQQETTHPPPPQ
GRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001900RNase_II/R
IPR038664Gar1/Naf1_Cbf5-bd_sf
IPR007504H/ACA_rnp_Gar1/Naf1
IPR012340NA-bd_OB-fold
IPR009000Transl_B-barrel_sf