Ggra10231.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10231.t1
Unique NameGgra10231.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length660
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:163704..165683 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog42345.XP_008812036.1
Preferred nameHSP70
PFAMsHSP70,MreB_Mbl
Max annot lvl35493|Streptophyta
KEGG koko:K03283
KEGG TC1.A.33.1
KEGG Pathwayko03040,ko04010,ko04141,ko04144,ko04213,ko04612,ko04915,ko05134,ko05145,ko05162,ko05164,ko05169,map03040,map04010,map04141,map04144,map04213,map04612,map04915,map05134,map05145,map05162,map05164,map05169
KEGG ModuleM00353,M00355
GOsGO:0000166,GO:0000302,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005794,GO:0005829,GO:0005886,GO:0006464,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0009266,GO:0009314,GO:0009408,GO:0009416,GO:0009605,GO:0009607,GO:0009615,GO:0009617,GO:0009628,GO:0009636,GO:0009642,GO:0009644,GO:0009987,GO:0010035,GO:0010038,GO:0012505,GO:0016020,GO:0016567,GO:0017076,GO:0019538,GO:0019899,GO:0030312,GO:0030554,GO:0031090,GO:0031625,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0042221,GO:0042493,GO:0042542,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046677,GO:0046686,GO:0048046,GO:0050896,GO:0051704,GO:0051707,GO:0070647,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098588,GO:0098805,GO:1901265,GO:1901363,GO:1901564,GO:1901700
Evalue0.0
EggNOG OGsCOG0443@1|root,KOG0101@2759|Eukaryota,37K68@33090|Viridiplantae,3GAQN@35493|Streptophyta,3KMAN@4447|Liliopsida
DescriptionBelongs to the heat shock protein 70 family
COG categoryO
BRITEko00000,ko00001,ko00002,ko01009,ko03009,ko03029,ko03041,ko03051,ko03110,ko04131,ko04147,ko04516
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10231Ggra10231Gracilaria gracilis GNS1m malegenetig00000016_pilon 163704..165683 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10231.t1.stop1Ggra10231.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 163704..163706 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10231.t1.CDS1Ggra10231.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 163704..165683 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10231.t1.exon1Ggra10231.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 163704..165683 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10231.t1.start1Ggra10231.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 165681..165683 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10231.t1Ggra10231.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 163704..165683 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10231.t1 ID=Ggra10231.t1|Name=Ggra10231.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=660bp
MSSAVGGPSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDN
ERLIGDAAKNQVAINPANTVFDAKRLIGRRFSDSSVQSDIKHFSFKVIQR
DGDKPYVQVMYKGDQKTFSPEEVSAMVLTKMKDVAESYLGKPIKSAVVTV
PAYFNDSQRLATKDAGTIAGINVSRIINEPTAAAIAYGLDRKASGHTARE
RNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRMVNHFM
NEFKRKYKRDISGNARSVRRLRTQCERAKRQLSSATQATIEIDSLFEGID
FYSSLTRAKFEELCMDLFRGTLEPVEKVLRDSKIPKADVDDIVLVGGSTR
IPKVQSLLVDFFNGKELCKNINPDEAVAHGAAVQAAILAGDTSEKTQDLL
LLDVTPLSLGIETAGAVMTVLIKRNTTIPTKKQQIFSTYADNQPGVLIQV
YEGERTRTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAED
KSTGKKNKITITNDKGRLSKEDIEKMVQDAEKYKAEDDAAKAKIEARNSL
ENYCYTLRNTLTEDKVKDKISEDDKKAIEDKVSEVLKWMEDNETAEKEEY
DEKQKSIEAVATPIITKMYQSGDGAAAGGMPGMDGMGGMGGAAPTGAAGG
EDVEISEVD*
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spliced messenger RNA

>Ggra10231.t1 ID=Ggra10231.t1|Name=Ggra10231.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1980bp|location=Sequence derived from alignment at tig00000016_pilon:163704..165683- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGTAGCGCTGTCGGTGGTCCGTCCATCGGAATTGACCTGGGTACTAC
CTATTCCTGCGTCGGCGTCTGGCAGAACGATCGCGTTGAGATTATTGCCA
ACGACCAGGGTAACCGCACCACACCTTCTTATGTCGCCTTCACTGACAAC
GAGCGTCTCATCGGAGATGCCGCCAAGAACCAGGTCGCCATCAACCCTGC
CAACACCGTTTTCGATGCCAAGCGTCTCATCGGCCGTCGCTTCTCCGACT
CCTCTGTACAGTCTGACATCAAGCACTTCTCCTTCAAGGTTATCCAGAGG
GATGGCGACAAGCCTTACGTCCAGGTCATGTACAAGGGTGATCAGAAGAC
TTTTTCTCCTGAGGAAGTCTCCGCCATGGTTCTCACCAAGATGAAGGATG
TTGCCGAGTCGTACCTCGGAAAGCCCATCAAGTCTGCCGTCGTCACCGTC
CCCGCTTATTTCAACGACTCTCAACGTCTTGCTACCAAGGATGCTGGAAC
CATTGCAGGCATCAACGTTTCTCGTATCATCAATGAGCCTACTGCCGCCG
CCATTGCCTACGGCTTGGATCGCAAGGCAAGTGGGCACACTGCTCGCGAG
AGGAACGTCCTCATCTTCGATTTGGGTGGTGGAACTTTCGATGTCTCCCT
GCTCACCATTGAGGATGGTATTTTTGAAGTGAAGGCAACTGCCGGTGACA
CTCATCTTGGTGGTGAGGATTTCGACAACCGCATGGTGAACCACTTTATG
AACGAGTTCAAGAGGAAGTACAAGAGGGACATTTCTGGAAATGCTCGCTC
TGTCCGTCGTCTCCGCACTCAGTGCGAACGTGCCAAGCGTCAGCTCTCCT
CTGCAACTCAGGCCACCATCGAAATCGACTCGCTCTTCGAGGGTATCGAC
TTCTACTCTTCACTCACTCGTGCCAAGTTCGAGGAGCTTTGCATGGACCT
CTTCAGAGGTACTTTGGAGCCTGTTGAGAAAGTTCTTCGGGATTCCAAGA
TCCCCAAGGCTGATGTTGATGACATTGTCCTCGTCGGTGGGTCCACCCGT
ATCCCGAAGGTACAGAGCCTGTTGGTGGACTTCTTCAATGGCAAGGAGCT
TTGCAAGAACATTAACCCGGATGAGGCCGTTGCCCACGGTGCTGCCGTTC
AGGCTGCCATTTTGGCTGGTGACACCTCCGAGAAGACTCAGGACCTTCTT
CTGCTCGATGTGACTCCGCTCTCTCTTGGTATCGAAACCGCCGGTGCCGT
CATGACTGTGCTCATCAAGAGGAACACAACAATCCCTACGAAGAAGCAAC
AGATCTTCTCCACCTATGCCGATAACCAACCCGGTGTGCTCATTCAAGTG
TACGAAGGAGAACGTACTCGTACCAAGGACAACAACTTGCTTGGCAAGTT
CGAACTCTCTGGCATTCCACCAGCACCCCGTGGTGTCCCACAAATCGAGG
TTACATTCGACATTGATGCCAACGGTATTTTGAACGTCAGTGCGGAGGAT
AAGAGCACTGGTAAGAAGAACAAGATTACAATCACTAACGACAAGGGTCG
ACTCAGCAAGGAGGATATCGAGAAGATGGTTCAGGATGCTGAGAAGTATA
AGGCTGAAGATGACGCCGCTAAGGCAAAGATCGAGGCTCGTAACTCTCTG
GAGAACTACTGCTATACGCTCCGCAATACCCTCACCGAGGACAAGGTGAA
GGACAAGATCAGTGAGGACGACAAGAAGGCCATCGAAGACAAGGTTTCTG
AGGTCCTGAAGTGGATGGAGGACAATGAGACAGCCGAGAAGGAGGAGTAT
GACGAGAAGCAAAAATCAATTGAAGCAGTCGCCACCCCGATCATCACAAA
GATGTACCAAAGCGGTGATGGAGCTGCTGCTGGTGGTATGCCAGGCATGG
ATGGGATGGGCGGAATGGGCGGTGCTGCGCCCACAGGTGCTGCTGGAGGT
GAGGACGTCGAAATATCTGAGGTTGATTAA
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protein sequence of Ggra10231.t1

>Ggra10231.t1 ID=Ggra10231.t1|Name=Ggra10231.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=660bp
MSSAVGGPSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDN
ERLIGDAAKNQVAINPANTVFDAKRLIGRRFSDSSVQSDIKHFSFKVIQR
DGDKPYVQVMYKGDQKTFSPEEVSAMVLTKMKDVAESYLGKPIKSAVVTV
PAYFNDSQRLATKDAGTIAGINVSRIINEPTAAAIAYGLDRKASGHTARE
RNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRMVNHFM
NEFKRKYKRDISGNARSVRRLRTQCERAKRQLSSATQATIEIDSLFEGID
FYSSLTRAKFEELCMDLFRGTLEPVEKVLRDSKIPKADVDDIVLVGGSTR
IPKVQSLLVDFFNGKELCKNINPDEAVAHGAAVQAAILAGDTSEKTQDLL
LLDVTPLSLGIETAGAVMTVLIKRNTTIPTKKQQIFSTYADNQPGVLIQV
YEGERTRTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAED
KSTGKKNKITITNDKGRLSKEDIEKMVQDAEKYKAEDDAAKAKIEARNSL
ENYCYTLRNTLTEDKVKDKISEDDKKAIEDKVSEVLKWMEDNETAEKEEY
DEKQKSIEAVATPIITKMYQSGDGAAAGGMPGMDGMGGMGGAAPTGAAGG
EDVEISEVD*
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mRNA from alignment at tig00000016_pilon:163704..165683-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10231.t1 ID=Ggra10231.t1|Name=Ggra10231.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1980bp|location=Sequence derived from alignment at tig00000016_pilon:163704..165683- (Gracilaria gracilis GNS1m male)
ATGAGTAGCGCTGTCGGTGGTCCGTCCATCGGAATTGACCTGGGTACTAC
CTATTCCTGCGTCGGCGTCTGGCAGAACGATCGCGTTGAGATTATTGCCA
ACGACCAGGGTAACCGCACCACACCTTCTTATGTCGCCTTCACTGACAAC
GAGCGTCTCATCGGAGATGCCGCCAAGAACCAGGTCGCCATCAACCCTGC
CAACACCGTTTTCGATGCCAAGCGTCTCATCGGCCGTCGCTTCTCCGACT
CCTCTGTACAGTCTGACATCAAGCACTTCTCCTTCAAGGTTATCCAGAGG
GATGGCGACAAGCCTTACGTCCAGGTCATGTACAAGGGTGATCAGAAGAC
TTTTTCTCCTGAGGAAGTCTCCGCCATGGTTCTCACCAAGATGAAGGATG
TTGCCGAGTCGTACCTCGGAAAGCCCATCAAGTCTGCCGTCGTCACCGTC
CCCGCTTATTTCAACGACTCTCAACGTCTTGCTACCAAGGATGCTGGAAC
CATTGCAGGCATCAACGTTTCTCGTATCATCAATGAGCCTACTGCCGCCG
CCATTGCCTACGGCTTGGATCGCAAGGCAAGTGGGCACACTGCTCGCGAG
AGGAACGTCCTCATCTTCGATTTGGGTGGTGGAACTTTCGATGTCTCCCT
GCTCACCATTGAGGATGGTATTTTTGAAGTGAAGGCAACTGCCGGTGACA
CTCATCTTGGTGGTGAGGATTTCGACAACCGCATGGTGAACCACTTTATG
AACGAGTTCAAGAGGAAGTACAAGAGGGACATTTCTGGAAATGCTCGCTC
TGTCCGTCGTCTCCGCACTCAGTGCGAACGTGCCAAGCGTCAGCTCTCCT
CTGCAACTCAGGCCACCATCGAAATCGACTCGCTCTTCGAGGGTATCGAC
TTCTACTCTTCACTCACTCGTGCCAAGTTCGAGGAGCTTTGCATGGACCT
CTTCAGAGGTACTTTGGAGCCTGTTGAGAAAGTTCTTCGGGATTCCAAGA
TCCCCAAGGCTGATGTTGATGACATTGTCCTCGTCGGTGGGTCCACCCGT
ATCCCGAAGGTACAGAGCCTGTTGGTGGACTTCTTCAATGGCAAGGAGCT
TTGCAAGAACATTAACCCGGATGAGGCCGTTGCCCACGGTGCTGCCGTTC
AGGCTGCCATTTTGGCTGGTGACACCTCCGAGAAGACTCAGGACCTTCTT
CTGCTCGATGTGACTCCGCTCTCTCTTGGTATCGAAACCGCCGGTGCCGT
CATGACTGTGCTCATCAAGAGGAACACAACAATCCCTACGAAGAAGCAAC
AGATCTTCTCCACCTATGCCGATAACCAACCCGGTGTGCTCATTCAAGTG
TACGAAGGAGAACGTACTCGTACCAAGGACAACAACTTGCTTGGCAAGTT
CGAACTCTCTGGCATTCCACCAGCACCCCGTGGTGTCCCACAAATCGAGG
TTACATTCGACATTGATGCCAACGGTATTTTGAACGTCAGTGCGGAGGAT
AAGAGCACTGGTAAGAAGAACAAGATTACAATCACTAACGACAAGGGTCG
ACTCAGCAAGGAGGATATCGAGAAGATGGTTCAGGATGCTGAGAAGTATA
AGGCTGAAGATGACGCCGCTAAGGCAAAGATCGAGGCTCGTAACTCTCTG
GAGAACTACTGCTATACGCTCCGCAATACCCTCACCGAGGACAAGGTGAA
GGACAAGATCAGTGAGGACGACAAGAAGGCCATCGAAGACAAGGTTTCTG
AGGTCCTGAAGTGGATGGAGGACAATGAGACAGCCGAGAAGGAGGAGTAT
GACGAGAAGCAAAAATCAATTGAAGCAGTCGCCACCCCGATCATCACAAA
GATGTACCAAAGCGGTGATGGAGCTGCTGCTGGTGGTATGCCAGGCATGG
ATGGGATGGGCGGAATGGGCGGTGCTGCGCCCACAGGTGCTGCTGGAGGT
GAGGACGTCGAAATATCTGAGGTTGATTAA
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Coding sequence (CDS) from alignment at tig00000016_pilon:163704..165683-

>Ggra10231.t1 ID=Ggra10231.t1|Name=Ggra10231.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1980bp|location=Sequence derived from alignment at tig00000016_pilon:163704..165683- (Gracilaria gracilis GNS1m male)
ATGAGTAGCGCTGTCGGTGGTCCGTCCATCGGAATTGACCTGGGTACTAC
CTATTCCTGCGTCGGCGTCTGGCAGAACGATCGCGTTGAGATTATTGCCA
ACGACCAGGGTAACCGCACCACACCTTCTTATGTCGCCTTCACTGACAAC
GAGCGTCTCATCGGAGATGCCGCCAAGAACCAGGTCGCCATCAACCCTGC
CAACACCGTTTTCGATGCCAAGCGTCTCATCGGCCGTCGCTTCTCCGACT
CCTCTGTACAGTCTGACATCAAGCACTTCTCCTTCAAGGTTATCCAGAGG
GATGGCGACAAGCCTTACGTCCAGGTCATGTACAAGGGTGATCAGAAGAC
TTTTTCTCCTGAGGAAGTCTCCGCCATGGTTCTCACCAAGATGAAGGATG
TTGCCGAGTCGTACCTCGGAAAGCCCATCAAGTCTGCCGTCGTCACCGTC
CCCGCTTATTTCAACGACTCTCAACGTCTTGCTACCAAGGATGCTGGAAC
CATTGCAGGCATCAACGTTTCTCGTATCATCAATGAGCCTACTGCCGCCG
CCATTGCCTACGGCTTGGATCGCAAGGCAAGTGGGCACACTGCTCGCGAG
AGGAACGTCCTCATCTTCGATTTGGGTGGTGGAACTTTCGATGTCTCCCT
GCTCACCATTGAGGATGGTATTTTTGAAGTGAAGGCAACTGCCGGTGACA
CTCATCTTGGTGGTGAGGATTTCGACAACCGCATGGTGAACCACTTTATG
AACGAGTTCAAGAGGAAGTACAAGAGGGACATTTCTGGAAATGCTCGCTC
TGTCCGTCGTCTCCGCACTCAGTGCGAACGTGCCAAGCGTCAGCTCTCCT
CTGCAACTCAGGCCACCATCGAAATCGACTCGCTCTTCGAGGGTATCGAC
TTCTACTCTTCACTCACTCGTGCCAAGTTCGAGGAGCTTTGCATGGACCT
CTTCAGAGGTACTTTGGAGCCTGTTGAGAAAGTTCTTCGGGATTCCAAGA
TCCCCAAGGCTGATGTTGATGACATTGTCCTCGTCGGTGGGTCCACCCGT
ATCCCGAAGGTACAGAGCCTGTTGGTGGACTTCTTCAATGGCAAGGAGCT
TTGCAAGAACATTAACCCGGATGAGGCCGTTGCCCACGGTGCTGCCGTTC
AGGCTGCCATTTTGGCTGGTGACACCTCCGAGAAGACTCAGGACCTTCTT
CTGCTCGATGTGACTCCGCTCTCTCTTGGTATCGAAACCGCCGGTGCCGT
CATGACTGTGCTCATCAAGAGGAACACAACAATCCCTACGAAGAAGCAAC
AGATCTTCTCCACCTATGCCGATAACCAACCCGGTGTGCTCATTCAAGTG
TACGAAGGAGAACGTACTCGTACCAAGGACAACAACTTGCTTGGCAAGTT
CGAACTCTCTGGCATTCCACCAGCACCCCGTGGTGTCCCACAAATCGAGG
TTACATTCGACATTGATGCCAACGGTATTTTGAACGTCAGTGCGGAGGAT
AAGAGCACTGGTAAGAAGAACAAGATTACAATCACTAACGACAAGGGTCG
ACTCAGCAAGGAGGATATCGAGAAGATGGTTCAGGATGCTGAGAAGTATA
AGGCTGAAGATGACGCCGCTAAGGCAAAGATCGAGGCTCGTAACTCTCTG
GAGAACTACTGCTATACGCTCCGCAATACCCTCACCGAGGACAAGGTGAA
GGACAAGATCAGTGAGGACGACAAGAAGGCCATCGAAGACAAGGTTTCTG
AGGTCCTGAAGTGGATGGAGGACAATGAGACAGCCGAGAAGGAGGAGTAT
GACGAGAAGCAAAAATCAATTGAAGCAGTCGCCACCCCGATCATCACAAA
GATGTACCAAAGCGGTGATGGAGCTGCTGCTGGTGGTATGCCAGGCATGG
ATGGGATGGGCGGAATGGGCGGTGCTGCGCCCACAGGTGCTGCTGGAGGT
GAGGACGTCGAAATATCTGAGGTTGATTAA
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