Ggra10276.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10276.t1
Unique NameGgra10276.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length307
Homology
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BLAST of Ggra10276.t1 vs. uniprot
Match: A0A2V3IEW3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEW3_9FLOR)

HSP 1 Score: 178 bits (451), Expect = 4.040e-51
Identity = 120/219 (54.79%), Postives = 149/219 (68.04%), Query Frame = 0 
Query:   69 MPPETRKKISDALKGRRKSAEHRESLRRRFEGSQNPMYGRKRSAESRAKISRAMAAKAKQKKSAEQPDKPP------------VQEEALDQLREKAKESRLITSVTEEPEKRVRRRAAHDELESAHVDRILKRVAKFEQPPESVVRALNSNREKRITRANQRRIEN---RSQELPPNEQPSQIPNPQ--PEANKRSRTSEAKNKAHAKCSLCKGTGLME 270
            MP ETR+KIS ALKGRRKS EHRESLRRRFEGSQNPMYGRK SAESRAKISRAMAAK KQKK  +  DKP             + E+ LDQLREKA +S+LITS T+ P KR   R  HD+LE+AH+D+ILKRVA  ++PPE+VVR L +NR++R     +RR  N   R+   PP+   S+  + +  PE +K    SE     + +C++C GTGLM+
Sbjct:    1 MPAETRRKISAALKGRRKSPEHRESLRRRFEGSQNPMYGRKLSAESRAKISRAMAAKGKQKKQ-DNVDKPEQANSPAKRKNKQLMEQTLDQLREKAVQSKLITSATQPPPKRKPNRILHDDLEAAHLDKILKRVASLDEPPEAVVRTLQNNRKRREKNTLERRAANNRGRAASGPPSTGLSEKSDKKALPEPDKTVDASER----NCQCTVCNGTGLMQ 214
The following BLAST results are available for this feature:
BLAST of Ggra10276.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IEW34.040e-5154.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003611Nuclease associated modular domain 3SMARTSM00496seet_6coord: 65..81
e-value: 67.0
score: 9.2
coord: 106..122
e-value: 2.4
score: 17.1
IPR003611Nuclease associated modular domain 3PFAMPF07460NUMOD3coord: 83..119
e-value: 1.5E-7
score: 31.2
coord: 71..83
e-value: 0.15
score: 12.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..98
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..306
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availableSUPERFAMILY64496DNA-binding domain of intron-encoded endonucleasescoord: 71..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:356037..356957 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10276.t1Ggra10276.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 356037..356957 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10276.t1 ID=Ggra10276.t1|Name=Ggra10276.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=307bp
MQAAFVTLSKPLAHSDTSPAICKRRPRIHHRPVIWTITSRRGIQKDTQNT
PPPDGETPANDSRRRRMPMPPETRKKISDALKGRRKSAEHRESLRRRFEG
SQNPMYGRKRSAESRAKISRAMAAKAKQKKSAEQPDKPPVQEEALDQLRE
KAKESRLITSVTEEPEKRVRRRAAHDELESAHVDRILKRVAKFEQPPESV
VRALNSNREKRITRANQRRIENRSQELPPNEQPSQIPNPQPEANKRSRTS
EAKNKAHAKCSLCKGTGLMECPRCIISGIPSSRCELCFGAGGVFCDTCNG
VGALVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003611NUMOD3